| Definition | Candidatus Solibacter usitatus Ellin6076 chromosome, complete genome. |
|---|---|
| Accession | NC_008536 |
| Length | 9,965,640 |
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The map label for this gene is 116621808
Identifier: 116621808
GI number: 116621808
Start: 3409704
End: 3410861
Strand: Direct
Name: 116621808
Synonym: Acid_2690
Alternate gene names: NA
Gene position: 3409704-3410861 (Clockwise)
Preceding gene: 116621807
Following gene: 116621810
Centisome position: 34.21
GC content: 67.18
Gene sequence:
>1158_bases GTGACCCCTTCCCTGATTTCGCGGCGGGCACTGCTCGTGTCTTCCGCCGCCGCCCTCTCCTGCGCCCGCCCTAAAGCCGA GCGCTTCTTCGGCTATTGCTTCGTCGCCAATTACGACGGCCATTCCATCGCCGCGGTCGATCTCAGCCGCTTCAAGACCC GCCGGCAGATCCCGCTCGACGCCGCTCCCTCCCAAATCCTCGCCCGCCCCAAAACCACCCGCGCCTACGCCCTCACCCCC GCCAACGGCACCATCCACGAAATCGAGGCTGGACTGCTCACCATCCCGCGCCGCGTCAAGGCCGGCAACGAGGCCGTCTC CATGCGCCTCTCCCGCAATGGCGACGCCCTCTGGGTCCTCTACCGCGACCCCGCCAGCCTCGTCGAAATCCCCTTCGATA CCCTGCGCCCCGCGCGCCGCATCCGCCTCTCCTCCGCGCCTGACGATTTCGACCTCAGCCGCGAAGCCGATGACGCCTGC GTCCTCACCCGCCGCGATCGCACCCTCGCCATCGTCCCGCTCGCCAACTCCGCCCTCGCCCGCACCATCCAGTCCCCCAC CGAGCCCACCCTCGCGCGTTTCCGCCTCGATGGCCGCCAACTGATCGCTGGCTCCCAGTCCGACCGCAGCCTCACCTTCT ACGATGTCCCCACCGGAAAAACCATCGTCCGCCTCCCGCTCGCGCTTGCTCCCACGGAGTTCTGCTTCACCAGCGATGGC GGCCAGCTCTACGTGACCGGCGACGGTATGGACGCCGTCGTCAGCGTATTTCCCTACCGCACCGAAGTCTGGGAAACTCT GCTCGCCGGCCATTCTCCCGGAGTCATGGCCACCGCCGAGCCTGCCACGCCTCCCGCCTACCTGCTGGTTGCGAATCCCG GCGCCGACACCGTCACCGTGCTCGATATCGAATCCGGCAAACTCATCGCCCTCGTCACCGTCGGCAGCGGGCCCGGCCAG ATCGTCCTTACTCCCAACCGCGAGTATGCGCTCGTGCTCAACGAAAAATCCGGCGACATGGCTGTCATCCGCATCTTCTC CCTCGGCGGCAACCAGGTCGGCGGCCAGCGCGTCAAGCGCTACAAATCCGCTCCACTCTTCACCATGATCCCCGTCGGCG AACGCCCCGTCAGCGCCGCCGTCGTCAGCCTTTCATAG
Upstream 100 bases:
>100_bases TCCCCTAAACACGCTTTCCAAGCGTGCGCCTTCAACCACTCGGCCATCTCTCCGAACCTTCAGAATACCACGAGCCGCCG TCCGGCTTAGAATAAAGGGA
Downstream 100 bases:
>100_bases AATAGGAGTCCGGCTCGCCCACTAATCGGCTTTTTCCCTCATCGCCGCCGCGTCCCACTTACACACCCTCTTCTCGTAGC AGCTGACATTGGCCAACAAC
Product: hypothetical protein
Products: NA
Alternate protein names: Beta-Propeller Repeat Protein YVTN Family; 40-Residue YVTN Family Beta-Propeller Repeat Protein
Number of amino acids: Translated: 385; Mature: 384
Protein sequence:
>385_residues MTPSLISRRALLVSSAAALSCARPKAERFFGYCFVANYDGHSIAAVDLSRFKTRRQIPLDAAPSQILARPKTTRAYALTP ANGTIHEIEAGLLTIPRRVKAGNEAVSMRLSRNGDALWVLYRDPASLVEIPFDTLRPARRIRLSSAPDDFDLSREADDAC VLTRRDRTLAIVPLANSALARTIQSPTEPTLARFRLDGRQLIAGSQSDRSLTFYDVPTGKTIVRLPLALAPTEFCFTSDG GQLYVTGDGMDAVVSVFPYRTEVWETLLAGHSPGVMATAEPATPPAYLLVANPGADTVTVLDIESGKLIALVTVGSGPGQ IVLTPNREYALVLNEKSGDMAVIRIFSLGGNQVGGQRVKRYKSAPLFTMIPVGERPVSAAVVSLS
Sequences:
>Translated_385_residues MTPSLISRRALLVSSAAALSCARPKAERFFGYCFVANYDGHSIAAVDLSRFKTRRQIPLDAAPSQILARPKTTRAYALTP ANGTIHEIEAGLLTIPRRVKAGNEAVSMRLSRNGDALWVLYRDPASLVEIPFDTLRPARRIRLSSAPDDFDLSREADDAC VLTRRDRTLAIVPLANSALARTIQSPTEPTLARFRLDGRQLIAGSQSDRSLTFYDVPTGKTIVRLPLALAPTEFCFTSDG GQLYVTGDGMDAVVSVFPYRTEVWETLLAGHSPGVMATAEPATPPAYLLVANPGADTVTVLDIESGKLIALVTVGSGPGQ IVLTPNREYALVLNEKSGDMAVIRIFSLGGNQVGGQRVKRYKSAPLFTMIPVGERPVSAAVVSLS >Mature_384_residues TPSLISRRALLVSSAAALSCARPKAERFFGYCFVANYDGHSIAAVDLSRFKTRRQIPLDAAPSQILARPKTTRAYALTPA NGTIHEIEAGLLTIPRRVKAGNEAVSMRLSRNGDALWVLYRDPASLVEIPFDTLRPARRIRLSSAPDDFDLSREADDACV LTRRDRTLAIVPLANSALARTIQSPTEPTLARFRLDGRQLIAGSQSDRSLTFYDVPTGKTIVRLPLALAPTEFCFTSDGG QLYVTGDGMDAVVSVFPYRTEVWETLLAGHSPGVMATAEPATPPAYLLVANPGADTVTVLDIESGKLIALVTVGSGPGQI VLTPNREYALVLNEKSGDMAVIRIFSLGGNQVGGQRVKRYKSAPLFTMIPVGERPVSAAVVSLS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 41436; Mature: 41305
Theoretical pI: Translated: 9.50; Mature: 9.50
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTPSLISRRALLVSSAAALSCARPKAERFFGYCFVANYDGHSIAAVDLSRFKTRRQIPLD CCCHHHHHHHHHHCCHHHHHCCCCCCCCEEEEEEEEECCCCEEEEEEHHHHHHHCCCCCC AAPSQILARPKTTRAYALTPANGTIHEIEAGLLTIPRRVKAGNEAVSMRLSRNGDALWVL CCCHHHHCCCCCCEEEEEECCCCCCEEECCCEEECCHHHCCCCCEEEEEEECCCCEEEEE YRDPASLVEIPFDTLRPARRIRLSSAPDDFDLSREADDACVLTRRDRTLAIVPLANSALA EECCCCEEECCHHHCCCHHEEEECCCCCCCCCCCCCCCEEEEEECCCEEEEEEECCHHHH RTIQSPTEPTLARFRLDGRQLIAGSQSDRSLTFYDVPTGKTIVRLPLALAPTEFCFTSDG HHHCCCCCCCEEEEEECCCEEEECCCCCCEEEEEECCCCCEEEEEEEEECCCEEEEECCC GQLYVTGDGMDAVVSVFPYRTEVWETLLAGHSPGVMATAEPATPPAYLLVANPGADTVTV CEEEEECCCHHEEHEECCCHHHHHHHHHCCCCCCEEEECCCCCCCEEEEEECCCCCEEEE LDIESGKLIALVTVGSGPGQIVLTPNREYALVLNEKSGDMAVIRIFSLGGNQVGGQRVKR EEECCCCEEEEEEECCCCCEEEEECCCCEEEEEECCCCCEEEEEEEECCCCCCCHHHHHH YKSAPLFTMIPVGERPVSAAVVSLS HCCCCEEEEEECCCCCCEEEEEEEC >Mature Secondary Structure TPSLISRRALLVSSAAALSCARPKAERFFGYCFVANYDGHSIAAVDLSRFKTRRQIPLD CCHHHHHHHHHHCCHHHHHCCCCCCCCEEEEEEEEECCCCEEEEEEHHHHHHHCCCCCC AAPSQILARPKTTRAYALTPANGTIHEIEAGLLTIPRRVKAGNEAVSMRLSRNGDALWVL CCCHHHHCCCCCCEEEEEECCCCCCEEECCCEEECCHHHCCCCCEEEEEEECCCCEEEEE YRDPASLVEIPFDTLRPARRIRLSSAPDDFDLSREADDACVLTRRDRTLAIVPLANSALA EECCCCEEECCHHHCCCHHEEEECCCCCCCCCCCCCCCEEEEEECCCEEEEEEECCHHHH RTIQSPTEPTLARFRLDGRQLIAGSQSDRSLTFYDVPTGKTIVRLPLALAPTEFCFTSDG HHHCCCCCCCEEEEEECCCEEEECCCCCCEEEEEECCCCCEEEEEEEEECCCEEEEECCC GQLYVTGDGMDAVVSVFPYRTEVWETLLAGHSPGVMATAEPATPPAYLLVANPGADTVTV CEEEEECCCHHEEHEECCCHHHHHHHHHCCCCCCEEEECCCCCCCEEEEEECCCCCEEEE LDIESGKLIALVTVGSGPGQIVLTPNREYALVLNEKSGDMAVIRIFSLGGNQVGGQRVKR EEECCCCEEEEEEECCCCCEEEEECCCCEEEEEECCCCCEEEEEEEECCCCCCCHHHHHH YKSAPLFTMIPVGERPVSAAVVSLS HCCCCEEEEEECCCCCCEEEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA