| Definition | Candidatus Solibacter usitatus Ellin6076 chromosome, complete genome. |
|---|---|
| Accession | NC_008536 |
| Length | 9,965,640 |
Click here to switch to the map view.
The map label for this gene is 116621789
Identifier: 116621789
GI number: 116621789
Start: 3383998
End: 3385638
Strand: Direct
Name: 116621789
Synonym: Acid_2671
Alternate gene names: NA
Gene position: 3383998-3385638 (Clockwise)
Preceding gene: 116621788
Following gene: 116621790
Centisome position: 33.96
GC content: 65.33
Gene sequence:
>1641_bases ATGCCCGCGACTCTGACTATCAACGGACAGTCCGCGGCGGCCGACCCGAAGGTTCCGCTGTTTGACCTGGCGGCCTCGAT CGGCATTCCGGTGCCGACCTCCTGCCGCAAGCAGGGCAAGTGCAAGGAGTGCATCGTCGAGATCTCCGAGGGGATGGAGT CACTCACCGCGCGCACAGAGGCCGAGCGCCACCTGCGCGGCAATTTCCGTCTTTCGTGCCAGGCAGCGATTGAGGGGAAC GGGCCGGTGCGTTGCCACACGATGCGCCGCGGCCACATGCGCATCGAGCGCCACGCCATCGGACTTCCGGCGCACGCGGG CGGGCGGCCCGACCCCACGGTAACTCGCGACGGCGACCGCATCCTGATCGATGGCGAAGAGGTGGAGCGTTCCAGCGGAT CCAGTATCGGCCCCATCCACGGGATCGCGATGGACCTGGGCACCACCACGGTGGTACTCCGGCTGATCGATCTGGAAACC GGCGAGTGCATCGCCGACGCATCGTTCGAAAATCCGCAGCGCTTCGGCGGATCGGACGTGATGGCGCGCATTGGCTACGA TGGCGAACACCGCGGCCTGATGATGCGCACGCTGGCTGGATATCTCACGCACGCCATCGAAGACTTCCCGGTGGACCCGC TCACTATTTATGAGATGGTGGTCGCGGGCAATTCCACCATGCGCGATTTGTTTTTCTGGCAGAGCGTGCATTCAATCGGC CAAACTCCGTACCGGTCGATCACCGAGATCGAGATGCAGGAGGGGCGGCGCGCCACCACCGCGCTGACTTCCACGGGACG TCGCAGTTTGTTGCCGATTCATCCGCGGGCGCGGGTTTACGGGCTGCCCATCATCAGCGGCCACGTGGGCGCGGATGCCG CGGCCTGCATGCTCGCGATCGACCTGGCGCATGAAGAGCGCCTGGTCGCCATCATGGACATCGGCACCAACACGGAGTTG ATCCTGGGCAACCGCCACCGCATCGTCGCGGCGTCCTGTCCGGCGGGTCCGGCTTTCGAGGGCGGTGCGATCTCCTGCGG CATGCCCGCGCTCGAGGGCGCGATCGAAAGGGTGGCGATCGATCGCGATGGCGCATTCCATCTCGGCGTGGTCGGCGATC GCGCTCCGCAAGGGATCTGCGGGTCGGGCCTGGTGGACCTGATGAGCGAACTCCTGCGCACCGGGCGGATGAACTCCATG GGGCGCTTCGCGGACGACGAAAGCCGAATCGAGCTCCCTGGCGGCATCGCGTTCCTGGAGAGCGACGTCAACGAACTGGC GCAGGCGAAGGCGGCCAACGTCGCGGGGTTGCAGGTGGTGATCGACAATTTCGGCCTCGGCTTCGGCCAGATTGAAGTGT TTTACCTGGGCGGAGCTTTTGGCCGCCATATGAGCATCGAAGCCGCGCAGCGCATCGGGCTGATTCCGCGGATTGCCGAA TCGCGCATCGTGCAGGTTGGCAATGCGGCAATCGAGGGCGCAAGCATCGCGCTGCTCTCCGGCTCGCGCCGCGCGGAACT GGAGCGGATGGTGCGGATGGTGGAGCATTGCCGCCTGGAAACCCATCCGGATTTCTTCGACTTCTTCGTCGAAGGCTGCC AGTTCAAGCCGGTGGAAGCGGCCAAAGGGGCGGCGGGATGA
Upstream 100 bases:
>100_bases GGAAGTGGAGCGAAGAGGAAGAGCGCGAAGGCTCGGCGGAGGATGTGGCCGAAGCCGTGAAAGCCGAGTTGGAGTCACAG GCCGAGTGGTAGACCCGGAA
Downstream 100 bases:
>100_bases TCCAACTCGCCGAGCTTTGTCCCGAGGTGACGGTGCAGGAATCCGAATACCTGCGCCTGCTCGGATATCCGCGCGATCAC GAATTGGAAGGCCGCGCGCG
Product: ferredoxin
Products: NA
Alternate protein names: Electron Transfer Protein; Flavoprotein; Vitamin; Corrinoid Activation/Regeneration Protein; Ferredoxin Domain-Containing Protein; Iron-Sulfur Protein; Ferredoxin-Containing Protein; ATP Synthase F0 A Subunit; Methyltransferase Activation Protein MapA; Activating; Methylamine Methyltransferase Corrinoid Activation Protein
Number of amino acids: Translated: 546; Mature: 545
Protein sequence:
>546_residues MPATLTINGQSAAADPKVPLFDLAASIGIPVPTSCRKQGKCKECIVEISEGMESLTARTEAERHLRGNFRLSCQAAIEGN GPVRCHTMRRGHMRIERHAIGLPAHAGGRPDPTVTRDGDRILIDGEEVERSSGSSIGPIHGIAMDLGTTTVVLRLIDLET GECIADASFENPQRFGGSDVMARIGYDGEHRGLMMRTLAGYLTHAIEDFPVDPLTIYEMVVAGNSTMRDLFFWQSVHSIG QTPYRSITEIEMQEGRRATTALTSTGRRSLLPIHPRARVYGLPIISGHVGADAAACMLAIDLAHEERLVAIMDIGTNTEL ILGNRHRIVAASCPAGPAFEGGAISCGMPALEGAIERVAIDRDGAFHLGVVGDRAPQGICGSGLVDLMSELLRTGRMNSM GRFADDESRIELPGGIAFLESDVNELAQAKAANVAGLQVVIDNFGLGFGQIEVFYLGGAFGRHMSIEAAQRIGLIPRIAE SRIVQVGNAAIEGASIALLSGSRRAELERMVRMVEHCRLETHPDFFDFFVEGCQFKPVEAAKGAAG
Sequences:
>Translated_546_residues MPATLTINGQSAAADPKVPLFDLAASIGIPVPTSCRKQGKCKECIVEISEGMESLTARTEAERHLRGNFRLSCQAAIEGN GPVRCHTMRRGHMRIERHAIGLPAHAGGRPDPTVTRDGDRILIDGEEVERSSGSSIGPIHGIAMDLGTTTVVLRLIDLET GECIADASFENPQRFGGSDVMARIGYDGEHRGLMMRTLAGYLTHAIEDFPVDPLTIYEMVVAGNSTMRDLFFWQSVHSIG QTPYRSITEIEMQEGRRATTALTSTGRRSLLPIHPRARVYGLPIISGHVGADAAACMLAIDLAHEERLVAIMDIGTNTEL ILGNRHRIVAASCPAGPAFEGGAISCGMPALEGAIERVAIDRDGAFHLGVVGDRAPQGICGSGLVDLMSELLRTGRMNSM GRFADDESRIELPGGIAFLESDVNELAQAKAANVAGLQVVIDNFGLGFGQIEVFYLGGAFGRHMSIEAAQRIGLIPRIAE SRIVQVGNAAIEGASIALLSGSRRAELERMVRMVEHCRLETHPDFFDFFVEGCQFKPVEAAKGAAG >Mature_545_residues PATLTINGQSAAADPKVPLFDLAASIGIPVPTSCRKQGKCKECIVEISEGMESLTARTEAERHLRGNFRLSCQAAIEGNG PVRCHTMRRGHMRIERHAIGLPAHAGGRPDPTVTRDGDRILIDGEEVERSSGSSIGPIHGIAMDLGTTTVVLRLIDLETG ECIADASFENPQRFGGSDVMARIGYDGEHRGLMMRTLAGYLTHAIEDFPVDPLTIYEMVVAGNSTMRDLFFWQSVHSIGQ TPYRSITEIEMQEGRRATTALTSTGRRSLLPIHPRARVYGLPIISGHVGADAAACMLAIDLAHEERLVAIMDIGTNTELI LGNRHRIVAASCPAGPAFEGGAISCGMPALEGAIERVAIDRDGAFHLGVVGDRAPQGICGSGLVDLMSELLRTGRMNSMG RFADDESRIELPGGIAFLESDVNELAQAKAANVAGLQVVIDNFGLGFGQIEVFYLGGAFGRHMSIEAAQRIGLIPRIAES RIVQVGNAAIEGASIALLSGSRRAELERMVRMVEHCRLETHPDFFDFFVEGCQFKPVEAAKGAAG
Specific function: Unknown
COG id: COG3894
COG function: function code R; Uncharacterized metal-binding protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 58542; Mature: 58411
Theoretical pI: Translated: 5.84; Mature: 5.84
Prosite motif: PS00592 GLYCOSYL_HYDROL_F9_1 ; PS51085 2FE2S_FER_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.2 %Cys (Translated Protein) 3.7 %Met (Translated Protein) 5.9 %Cys+Met (Translated Protein) 2.2 %Cys (Mature Protein) 3.5 %Met (Mature Protein) 5.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPATLTINGQSAAADPKVPLFDLAASIGIPVPTSCRKQGKCKECIVEISEGMESLTARTE CCCEEEECCCCCCCCCCCCHHHHHHHCCCCCCCCHHCCCCHHHHHHHHHHHHHHHHHHHH AERHLRGNFRLSCQAAIEGNGPVRCHTMRRGHMRIERHAIGLPAHAGGRPDPTVTRDGDR HHHHHCCCEEEEEEEEECCCCCEEEEEECCCCEEEEHHCCCCCCCCCCCCCCCEECCCCE ILIDGEEVERSSGSSIGPIHGIAMDLGTTTVVLRLIDLETGECIADASFENPQRFGGSDV EEECCHHHHHCCCCCCCCHHHEEECCCCCEEEEEEEECCCCCEEECCCCCCHHHCCCCHH MARIGYDGEHRGLMMRTLAGYLTHAIEDFPVDPLTIYEMVVAGNSTMRDLFFWQSVHSIG EEEECCCCCCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCCCHHHHHHHHHHHHHHC QTPYRSITEIEMQEGRRATTALTSTGRRSLLPIHPRARVYGLPIISGHVGADAAACMLAI CCCCCHHHHHHHHCCCCHHHHHHHCCCCCEEECCCCCEEEECEEEECCCCCHHHHHHHHH DLAHEERLVAIMDIGTNTELILGNRHRIVAASCPAGPAFEGGAISCGMPALEGAIERVAI HHCCCCCEEEEEECCCCCEEEECCCCEEEEEECCCCCCCCCCCEECCCHHHHHHHHHEEE DRDGAFHLGVVGDRAPQGICGSGLVDLMSELLRTGRMNSMGRFADDESRIELPGGIAFLE CCCCCEEEEEECCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCEECCCCHHHHH SDVNELAQAKAANVAGLQVVIDNFGLGFGQIEVFYLGGAFGRHMSIEAAQRIGLIPRIAE HHHHHHHHHHHCCCCEEEEEEECCCCCCCCEEEEEECCCCCCCCCHHHHHHCCCCHHHHH SRIVQVGNAAIEGASIALLSGSRRAELERMVRMVEHCRLETHPDFFDFFVEGCQFKPVEA HHHEECCCCEECCCEEEEECCCCHHHHHHHHHHHHHCCCCCCCCHHHHHHCCCCCCCCCC AKGAAG CCCCCC >Mature Secondary Structure PATLTINGQSAAADPKVPLFDLAASIGIPVPTSCRKQGKCKECIVEISEGMESLTARTE CCEEEECCCCCCCCCCCCHHHHHHHCCCCCCCCHHCCCCHHHHHHHHHHHHHHHHHHHH AERHLRGNFRLSCQAAIEGNGPVRCHTMRRGHMRIERHAIGLPAHAGGRPDPTVTRDGDR HHHHHCCCEEEEEEEEECCCCCEEEEEECCCCEEEEHHCCCCCCCCCCCCCCCEECCCCE ILIDGEEVERSSGSSIGPIHGIAMDLGTTTVVLRLIDLETGECIADASFENPQRFGGSDV EEECCHHHHHCCCCCCCCHHHEEECCCCCEEEEEEEECCCCCEEECCCCCCHHHCCCCHH MARIGYDGEHRGLMMRTLAGYLTHAIEDFPVDPLTIYEMVVAGNSTMRDLFFWQSVHSIG EEEECCCCCCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCCCHHHHHHHHHHHHHHC QTPYRSITEIEMQEGRRATTALTSTGRRSLLPIHPRARVYGLPIISGHVGADAAACMLAI CCCCCHHHHHHHHCCCCHHHHHHHCCCCCEEECCCCCEEEECEEEECCCCCHHHHHHHHH DLAHEERLVAIMDIGTNTELILGNRHRIVAASCPAGPAFEGGAISCGMPALEGAIERVAI HHCCCCCEEEEEECCCCCEEEECCCCEEEEEECCCCCCCCCCCEECCCHHHHHHHHHEEE DRDGAFHLGVVGDRAPQGICGSGLVDLMSELLRTGRMNSMGRFADDESRIELPGGIAFLE CCCCCEEEEEECCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCEECCCCHHHHH SDVNELAQAKAANVAGLQVVIDNFGLGFGQIEVFYLGGAFGRHMSIEAAQRIGLIPRIAE HHHHHHHHHHHCCCCEEEEEEECCCCCCCCEEEEEECCCCCCCCCHHHHHHCCCCHHHHH SRIVQVGNAAIEGASIALLSGSRRAELERMVRMVEHCRLETHPDFFDFFVEGCQFKPVEA HHHEECCCCEECCCEEEEECCCCHHHHHHHHHHHHHCCCCCCCCHHHHHHCCCCCCCCCC AKGAAG CCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA