| Definition | Candidatus Solibacter usitatus Ellin6076 chromosome, complete genome. |
|---|---|
| Accession | NC_008536 |
| Length | 9,965,640 |
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The map label for this gene is 116621769
Identifier: 116621769
GI number: 116621769
Start: 3356476
End: 3358509
Strand: Direct
Name: 116621769
Synonym: Acid_2651
Alternate gene names: NA
Gene position: 3356476-3358509 (Clockwise)
Preceding gene: 116621766
Following gene: 116621772
Centisome position: 33.68
GC content: 63.91
Gene sequence:
>2034_bases ATGACTCCCGGTTACAGATTGAGACTTTCGCCTATTCTTCGCAGTCTATCAGATAGTCGGAGCTACTGGTATTCAGGATT AGACGCGCGCCGGCGAGTTCCGTCTCGGAATTCCCGTATGCTGGAAAACGTGGCGATAACAAGGCGTGGATTCTTGGGCG GCGCGATCGCGGCGCCGCTCCTGGCGCAGAGTTCTCCGAGTGCGAACCTGTGGAACGGGTATGAGAAACGGGACTTCACC TTTGAAGGCCACGCGGCCTACGTGGTGCTGCCGCGCATCGCGGCGGCCGGGAAGCCGTGGTTCTGGCGCGCGCGATTCCC GGATTATCAGCCGCGCCCGGCGCTCGGCCTCCTGAGTAAGGGGTATCACCTGGCGTATCTGGACCTGCCGAATATCTTCG GCAATCCGGCTGCGGTAGGGGCATGGGAACGGTTCTACGATCACGTGGTGTTGAACTTCGGGCTGTCGCGCAAGATGTCG CTCGAGGGAATCAGCCGCGGCGCCCTGTTCGTGTACAACTGGGCGGCAAAGCATCCGGAACTGGTGAATTCGATTTACTG CGAGTCGCCGGTCTGCGACATGAAGAGCTGGCCGGGTGGCAAGGGCAAGGGTTTGGGCAGCGCGAAGGACTGGGAGGAGG CCCTGGCGGCCTTCAACCTCACGGAAGAGCAGATGATGCACTTCAACGGCAATCCGATTGGAGAACTGGCGCCGCTGGCC GCCCGTAAGATCCCGATCCTGCACGTGGTGAGCGATCGCGACGAGCTGGTGCCCGCGAAGGAGAACAGCGACGTGTTGGC GGAGCGCTACCGCCGAGTGGGCGGCACCATCGAGGTCTATCGGAACACGGGCATGCCGGATAGCTTGAACGGTCATCACT TCCCGCTCGACGATCCCGGCCATATCGTGAACTTCATCACCGGGGGGACCAGCGGGATGACGCCGCATCGCCGCGAGTAT TGCCAGATGCGCGGTGGACTGCGTAACGCGTGGCGCCGCCTGAACGCGGGCGGCAGCGCGCGCGTGGCCTTCCTCGGCGG CTCGATCACGCAGATGGCGGGCTGGCGTGACCTGGTAAGCAAGCAGCTGACCGCGCGGTTTCCAAAGACCAAGTTCGAGT TCGTCAACGCGGGGATCAGCTCCACGGGATCCACGCCGGGCGCCTTCCGGCTGGTGCGCGACGTGTTCGCGGGCGGTCCG GTCGATTTGCTGTTTGTGGAGGCGGCGGTGAACGATTCGACCAACGGGTTTGGGGCGCGGGAGCAGGTGCGCGGGATGGA AGGCATCGTGCGGCACGCGCGGCTGCTGCAGCCGGAGCTCGATATCGTGATGCTGCACTTCGTGGATCCCGAAAAGATGC AGGAACTGCGCGCCGGAAAACGGCCGGAAGTGATCGTGTCGCACGAGCTCGTCGCGGAGCGCTATGGCGTGCCCTCGATC GACCTGGCGCGTGAGGTCACGGAGCGCATCGACGCCGCCGAGTTCACGTGGGACGGCGATTTCAAAAGCCTCCATCCATC GCCGTTCGGGATGAGCGTGTACGCGCGCTCCATCGAGCGGCTGTTCGACGCGGCGTGGAAGCAGCCGCCGATGATCGAAG GCGCGGCGACGGCGCACGCGCTGCCGTCGGCCATCGATGAGCACAGCTACTTCCGAGGACGCCTGGTGAATGTCGGCGAA GTGAAAGGCTGGCGTGTGGATCCGGATTGGACGCCGTCGGACAAGGCGGGCACGCGCGCGGGCTTCGTCCATGTGCCGAT GCTGATCGGCGATACGGTGGGAGAGGAGTGCCGGTTCGCGTTCGAAGGCAACGCGGTGGGGATCTTCGTGGCGGGTCCGG ATGCGGGAGTGGTGGAGTTCCGCGTCGATGGCGGCGAGAGGCGGACGCAGAATCTCGGCCTCGGGGGTTGGAGCAGGACG CTGCACATTCCGTTCGCATACGTGCTAGATGAGGACCTGTCTTCTGGGCCACACGAACTGACGATGCGGGTTTCGATCGG AGTGATCCGGATCGCACAGATGCTAGTGAATTAG
Upstream 100 bases:
>100_bases GGCCCCTTGGCCTGCTGCGCCGGCTTACACGCCGCAAGCGTAAAAAGGCAGACTACGGACAACAGAGTCGCGGTACAACG ATTGATACCCGGCACGATGA
Downstream 100 bases:
>100_bases CGGTGGTGGAGTTTGGGGCTGTAGAGCGTGATGCCCGCGATGAACTGGTTGGCGGTCTGGCCGCCCCAGAGGGCGATGTG CTGGAATGAGAAATCGATCG
Product: putative O-antigen-like protein
Products: NA
Alternate protein names: Acyl-CoA Thioesterase; Sialate O-Acetylesterase; Signal Peptide; O-Antigen-Like Protein; Lipase/Acylhydrolase GDSL Family; Acyl-CoA Thioesterase I; Lipolytic Protein G-D-S-L Family; Alpha/Beta Hydrolase Fold-3 Domain Protein
Number of amino acids: Translated: 677; Mature: 676
Protein sequence:
>677_residues MTPGYRLRLSPILRSLSDSRSYWYSGLDARRRVPSRNSRMLENVAITRRGFLGGAIAAPLLAQSSPSANLWNGYEKRDFT FEGHAAYVVLPRIAAAGKPWFWRARFPDYQPRPALGLLSKGYHLAYLDLPNIFGNPAAVGAWERFYDHVVLNFGLSRKMS LEGISRGALFVYNWAAKHPELVNSIYCESPVCDMKSWPGGKGKGLGSAKDWEEALAAFNLTEEQMMHFNGNPIGELAPLA ARKIPILHVVSDRDELVPAKENSDVLAERYRRVGGTIEVYRNTGMPDSLNGHHFPLDDPGHIVNFITGGTSGMTPHRREY CQMRGGLRNAWRRLNAGGSARVAFLGGSITQMAGWRDLVSKQLTARFPKTKFEFVNAGISSTGSTPGAFRLVRDVFAGGP VDLLFVEAAVNDSTNGFGAREQVRGMEGIVRHARLLQPELDIVMLHFVDPEKMQELRAGKRPEVIVSHELVAERYGVPSI DLAREVTERIDAAEFTWDGDFKSLHPSPFGMSVYARSIERLFDAAWKQPPMIEGAATAHALPSAIDEHSYFRGRLVNVGE VKGWRVDPDWTPSDKAGTRAGFVHVPMLIGDTVGEECRFAFEGNAVGIFVAGPDAGVVEFRVDGGERRTQNLGLGGWSRT LHIPFAYVLDEDLSSGPHELTMRVSIGVIRIAQMLVN
Sequences:
>Translated_677_residues MTPGYRLRLSPILRSLSDSRSYWYSGLDARRRVPSRNSRMLENVAITRRGFLGGAIAAPLLAQSSPSANLWNGYEKRDFT FEGHAAYVVLPRIAAAGKPWFWRARFPDYQPRPALGLLSKGYHLAYLDLPNIFGNPAAVGAWERFYDHVVLNFGLSRKMS LEGISRGALFVYNWAAKHPELVNSIYCESPVCDMKSWPGGKGKGLGSAKDWEEALAAFNLTEEQMMHFNGNPIGELAPLA ARKIPILHVVSDRDELVPAKENSDVLAERYRRVGGTIEVYRNTGMPDSLNGHHFPLDDPGHIVNFITGGTSGMTPHRREY CQMRGGLRNAWRRLNAGGSARVAFLGGSITQMAGWRDLVSKQLTARFPKTKFEFVNAGISSTGSTPGAFRLVRDVFAGGP VDLLFVEAAVNDSTNGFGAREQVRGMEGIVRHARLLQPELDIVMLHFVDPEKMQELRAGKRPEVIVSHELVAERYGVPSI DLAREVTERIDAAEFTWDGDFKSLHPSPFGMSVYARSIERLFDAAWKQPPMIEGAATAHALPSAIDEHSYFRGRLVNVGE VKGWRVDPDWTPSDKAGTRAGFVHVPMLIGDTVGEECRFAFEGNAVGIFVAGPDAGVVEFRVDGGERRTQNLGLGGWSRT LHIPFAYVLDEDLSSGPHELTMRVSIGVIRIAQMLVN >Mature_676_residues TPGYRLRLSPILRSLSDSRSYWYSGLDARRRVPSRNSRMLENVAITRRGFLGGAIAAPLLAQSSPSANLWNGYEKRDFTF EGHAAYVVLPRIAAAGKPWFWRARFPDYQPRPALGLLSKGYHLAYLDLPNIFGNPAAVGAWERFYDHVVLNFGLSRKMSL EGISRGALFVYNWAAKHPELVNSIYCESPVCDMKSWPGGKGKGLGSAKDWEEALAAFNLTEEQMMHFNGNPIGELAPLAA RKIPILHVVSDRDELVPAKENSDVLAERYRRVGGTIEVYRNTGMPDSLNGHHFPLDDPGHIVNFITGGTSGMTPHRREYC QMRGGLRNAWRRLNAGGSARVAFLGGSITQMAGWRDLVSKQLTARFPKTKFEFVNAGISSTGSTPGAFRLVRDVFAGGPV DLLFVEAAVNDSTNGFGAREQVRGMEGIVRHARLLQPELDIVMLHFVDPEKMQELRAGKRPEVIVSHELVAERYGVPSID LAREVTERIDAAEFTWDGDFKSLHPSPFGMSVYARSIERLFDAAWKQPPMIEGAATAHALPSAIDEHSYFRGRLVNVGEV KGWRVDPDWTPSDKAGTRAGFVHVPMLIGDTVGEECRFAFEGNAVGIFVAGPDAGVVEFRVDGGERRTQNLGLGGWSRTL HIPFAYVLDEDLSSGPHELTMRVSIGVIRIAQMLVN
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 74857; Mature: 74726
Theoretical pI: Translated: 8.54; Mature: 8.54
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTPGYRLRLSPILRSLSDSRSYWYSGLDARRRVPSRNSRMLENVAITRRGFLGGAIAAPL CCCCCEEEHHHHHHHHHCCHHHHHCCCHHHHCCCCCHHHHHHHHHHHHCCCCCHHHHHHH LAQSSPSANLWNGYEKRDFTFEGHAAYVVLPRIAAAGKPWFWRARFPDYQPRPALGLLSK HHCCCCCCCCCCCCCCCCCEECCCEEEEEEEHHHHCCCCCEEECCCCCCCCCCCHHHHCC GYHLAYLDLPNIFGNPAAVGAWERFYDHVVLNFGLSRKMSLEGISRGALFVYNWAAKHPE CCEEEEEECCCCCCCCCHHHHHHHHHHHHHHHCCCCCCEECCCCCCCEEEEEECCCCCHH LVNSIYCESPVCDMKSWPGGKGKGLGSAKDWEEALAAFNLTEEQMMHFNGNPIGELAPLA HHHHHHCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCHHHHHHCCCCCCHHHHHHH ARKIPILHVVSDRDELVPAKENSDVLAERYRRVGGTIEVYRNTGMPDSLNGHHFPLDDPG HHCCCEEEEECCCHHCCCCCCCCHHHHHHHHHCCCEEEEEECCCCCCCCCCCCCCCCCCC HIVNFITGGTSGMTPHRREYCQMRGGLRNAWRRLNAGGSARVAFLGGSITQMAGWRDLVS CEEEEEECCCCCCCHHHHHHHHHHCCHHHHHHHHCCCCCEEEEEECCCHHHHHHHHHHHH KQLTARFPKTKFEFVNAGISSTGSTPGAFRLVRDVFAGGPVDLLFVEAAVNDSTNGFGAR HHHHHHCCCCHHHHHHCCCCCCCCCCHHHHHHHHHHCCCCEEEEEEEEECCCCCCCCCCH EQVRGMEGIVRHARLLQPELDIVMLHFVDPEKMQELRAGKRPEVIVSHELVAERYGVPSI HHHHHHHHHHHHHHHCCCCCCEEEEEECCHHHHHHHHCCCCCCEEEHHHHHHHHCCCCCH DLAREVTERIDAAEFTWDGDFKSLHPSPFGMSVYARSIERLFDAAWKQPPMIEGAATAHA HHHHHHHHHCCCCCEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCHHHHH LPSAIDEHSYFRGRLVNVGEVKGWRVDPDWTPSDKAGTRAGFVHVPMLIGDTVGEECRFA HHHHHHHHHHHCCEEEEECCCCCEEECCCCCCCCCCCCCCCEEEEHHHHCCCCCCCCEEE FEGNAVGIFVAGPDAGVVEFRVDGGERRTQNLGLGGWSRTLHIPFAYVLDEDLSSGPHEL ECCCEEEEEEECCCCCEEEEEECCCCCHHCCCCCCCCCEEEECCEEEEECHHHCCCCCEE TMRVSIGVIRIAQMLVN EEEEHHHHHHHHHHHCC >Mature Secondary Structure TPGYRLRLSPILRSLSDSRSYWYSGLDARRRVPSRNSRMLENVAITRRGFLGGAIAAPL CCCCEEEHHHHHHHHHCCHHHHHCCCHHHHCCCCCHHHHHHHHHHHHCCCCCHHHHHHH LAQSSPSANLWNGYEKRDFTFEGHAAYVVLPRIAAAGKPWFWRARFPDYQPRPALGLLSK HHCCCCCCCCCCCCCCCCCEECCCEEEEEEEHHHHCCCCCEEECCCCCCCCCCCHHHHCC GYHLAYLDLPNIFGNPAAVGAWERFYDHVVLNFGLSRKMSLEGISRGALFVYNWAAKHPE CCEEEEEECCCCCCCCCHHHHHHHHHHHHHHHCCCCCCEECCCCCCCEEEEEECCCCCHH LVNSIYCESPVCDMKSWPGGKGKGLGSAKDWEEALAAFNLTEEQMMHFNGNPIGELAPLA HHHHHHCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCHHHHHHCCCCCCHHHHHHH ARKIPILHVVSDRDELVPAKENSDVLAERYRRVGGTIEVYRNTGMPDSLNGHHFPLDDPG HHCCCEEEEECCCHHCCCCCCCCHHHHHHHHHCCCEEEEEECCCCCCCCCCCCCCCCCCC HIVNFITGGTSGMTPHRREYCQMRGGLRNAWRRLNAGGSARVAFLGGSITQMAGWRDLVS CEEEEEECCCCCCCHHHHHHHHHHCCHHHHHHHHCCCCCEEEEEECCCHHHHHHHHHHHH KQLTARFPKTKFEFVNAGISSTGSTPGAFRLVRDVFAGGPVDLLFVEAAVNDSTNGFGAR HHHHHHCCCCHHHHHHCCCCCCCCCCHHHHHHHHHHCCCCEEEEEEEEECCCCCCCCCCH EQVRGMEGIVRHARLLQPELDIVMLHFVDPEKMQELRAGKRPEVIVSHELVAERYGVPSI HHHHHHHHHHHHHHHCCCCCCEEEEEECCHHHHHHHHCCCCCCEEEHHHHHHHHCCCCCH DLAREVTERIDAAEFTWDGDFKSLHPSPFGMSVYARSIERLFDAAWKQPPMIEGAATAHA HHHHHHHHHCCCCCEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCHHHHH LPSAIDEHSYFRGRLVNVGEVKGWRVDPDWTPSDKAGTRAGFVHVPMLIGDTVGEECRFA HHHHHHHHHHHCCEEEEECCCCCEEECCCCCCCCCCCCCCCEEEEHHHHCCCCCCCCEEE FEGNAVGIFVAGPDAGVVEFRVDGGERRTQNLGLGGWSRTLHIPFAYVLDEDLSSGPHEL ECCCEEEEEEECCCCCEEEEEECCCCCHHCCCCCCCCCEEEECCEEEEECHHHCCCCCEE TMRVSIGVIRIAQMLVN EEEEHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA