| Definition | Candidatus Solibacter usitatus Ellin6076 chromosome, complete genome. |
|---|---|
| Accession | NC_008536 |
| Length | 9,965,640 |
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The map label for this gene is mmlH [H]
Identifier: 116621753
GI number: 116621753
Start: 3332315
End: 3333679
Strand: Reverse
Name: mmlH [H]
Synonym: Acid_2635
Alternate gene names: 116621753
Gene position: 3333679-3332315 (Counterclockwise)
Preceding gene: 116621754
Following gene: 116621750
Centisome position: 33.45
GC content: 62.42
Gene sequence:
>1365_bases ATGTCCCAATCCGGAACAACACCTGGGCTCGCTTCCGGCGGCCAGAATTACGCGTGGTACCGAGAGCTTACCGGCTACCA TTGGTTCGTGCTGAGCGTGGCCAGCATGGGTTGGATGTTCGATACCATGGCGCAGCAGTTGTTTAACCTGGCGCGCAAGC CCGCGATCAAGGAACTGCTTGGCGCCGGCGCGAGCAATGCCACGATCGACCAGCAGGCCGCGTGGGCAACCTCGATATTC ATGATTGGTTGGGCCATCGGCGGCGTCTTCTTCGGCATCCTCGGCGATCGCCTGGGGCGCGCCAAGACGATGACCATCAC GATCCTGAGCTACACCATCTTCACCGGCCTCAGCGTACTTTCCACCTCCGTGTGGGACTTCAATGTCTATCGGTTCCTTT GCGGCCTCGGCGTCGGCGGACAGTTCGCGGTGGGCGTGGCGCTGGTGGCGGAGGTGGTGCCGCAGCGGGCGCGGCCGTAC GCGCTCGGCTTCGTGCAGGCGGCGTCGGCAATCGGCAACATGATGGCCGCGTTCACCGGGATTATTGTCGGGCAGATGGA AGTCGCCGGCACCATCACAGGCGCGTGGCGCTGGGAATTCCTGGCGGGCGCGATCCCCGCCCCGCTCGCCTTCATCGTAT TTAAGAAGCTCAAAGAGCCCGAACAGTGGCTCAAGGCGCGGGCGGAAAAGAAGCAGATGGGCTCGTATAGCGAGCTGTTC AATGACCCGCGGTGGCGCAAGAACGCCATCGTCGGCTTTCTGCTGGCCTTCGCCGGAGTGGTCGGATTGTGGGGTATCGG CTTCTTCAGCTACGATCTCTTCCGCCCGGTGCTGGAGCGCACGTTCGCCGCAGAAGGTCTGGCGGGCAAAGCACTTTCAG GCAAAGTGACTACCTGGATCGGCATCACTTCGCTGCTGCAAAACATCGGCTGCTTTTTCGGCATCTACGCGTTCACTTAC CTGACGCACTACACCGGCCGCAAGAAGGCCTTTGCGATCGCGTTCCTGGCAGCGATGGGAATGACCGCGTACACCTTCTG GAACCTCAAGCAGATCAGCGACATCTTCTGGATGATCCCGCTGATGGGCTTCGCGCAGCTCTCGCTCTTCGGCGGCTATT CCATCTATCTCGCGGAGTTGTTCCCCACGCGATTGCGCAGCACCGGCACCAGTTTCTGCTACAACGTGGGGCGGTTCGCC GCCGCCGCGGGGCCCTTCACGCTCGGGTACCTGACGAAGGACGTCTTCGGCGGGTATGCGGAGCCCATGCGCTATGCGGG CGTCGCCATGAGCCTGGTCTTTTTGGTTGGATTGGCCGCGCTGCCCTTCGCGCCGGAGACCAAAGGCAAGCCGCTGCCGG AGTAG
Upstream 100 bases:
>100_bases TCTGGAAGGAATTAACGATACCGATGCCGTGGCCCTTCCGGCCGACATACCGTTAAAGACCGGCGACCGCGTCAGCGCCA CGATGTAGAATAGCAACTTA
Downstream 100 bases:
>100_bases GGCGGGGCTGCTGGTTGAGGCCGATTACCGGACGCTCCCTAACGGTCGCGGCTCGGATGAGGACGATGCGAAAGGCGGGG ACTCGTTGCGCTGCGTCACG
Product: major facilitator transporter
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 454; Mature: 453
Protein sequence:
>454_residues MSQSGTTPGLASGGQNYAWYRELTGYHWFVLSVASMGWMFDTMAQQLFNLARKPAIKELLGAGASNATIDQQAAWATSIF MIGWAIGGVFFGILGDRLGRAKTMTITILSYTIFTGLSVLSTSVWDFNVYRFLCGLGVGGQFAVGVALVAEVVPQRARPY ALGFVQAASAIGNMMAAFTGIIVGQMEVAGTITGAWRWEFLAGAIPAPLAFIVFKKLKEPEQWLKARAEKKQMGSYSELF NDPRWRKNAIVGFLLAFAGVVGLWGIGFFSYDLFRPVLERTFAAEGLAGKALSGKVTTWIGITSLLQNIGCFFGIYAFTY LTHYTGRKKAFAIAFLAAMGMTAYTFWNLKQISDIFWMIPLMGFAQLSLFGGYSIYLAELFPTRLRSTGTSFCYNVGRFA AAAGPFTLGYLTKDVFGGYAEPMRYAGVAMSLVFLVGLAALPFAPETKGKPLPE
Sequences:
>Translated_454_residues MSQSGTTPGLASGGQNYAWYRELTGYHWFVLSVASMGWMFDTMAQQLFNLARKPAIKELLGAGASNATIDQQAAWATSIF MIGWAIGGVFFGILGDRLGRAKTMTITILSYTIFTGLSVLSTSVWDFNVYRFLCGLGVGGQFAVGVALVAEVVPQRARPY ALGFVQAASAIGNMMAAFTGIIVGQMEVAGTITGAWRWEFLAGAIPAPLAFIVFKKLKEPEQWLKARAEKKQMGSYSELF NDPRWRKNAIVGFLLAFAGVVGLWGIGFFSYDLFRPVLERTFAAEGLAGKALSGKVTTWIGITSLLQNIGCFFGIYAFTY LTHYTGRKKAFAIAFLAAMGMTAYTFWNLKQISDIFWMIPLMGFAQLSLFGGYSIYLAELFPTRLRSTGTSFCYNVGRFA AAAGPFTLGYLTKDVFGGYAEPMRYAGVAMSLVFLVGLAALPFAPETKGKPLPE >Mature_453_residues SQSGTTPGLASGGQNYAWYRELTGYHWFVLSVASMGWMFDTMAQQLFNLARKPAIKELLGAGASNATIDQQAAWATSIFM IGWAIGGVFFGILGDRLGRAKTMTITILSYTIFTGLSVLSTSVWDFNVYRFLCGLGVGGQFAVGVALVAEVVPQRARPYA LGFVQAASAIGNMMAAFTGIIVGQMEVAGTITGAWRWEFLAGAIPAPLAFIVFKKLKEPEQWLKARAEKKQMGSYSELFN DPRWRKNAIVGFLLAFAGVVGLWGIGFFSYDLFRPVLERTFAAEGLAGKALSGKVTTWIGITSLLQNIGCFFGIYAFTYL THYTGRKKAFAIAFLAAMGMTAYTFWNLKQISDIFWMIPLMGFAQLSLFGGYSIYLAELFPTRLRSTGTSFCYNVGRFAA AAGPFTLGYLTKDVFGGYAEPMRYAGVAMSLVFLVGLAALPFAPETKGKPLPE
Specific function: Probable uptake of 4-methylmuconolactone [H]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the major facilitator superfamily. Sugar transporter (TC 2.A.1.1) family [H]
Homologues:
Organism=Homo sapiens, GI24308167, Length=469, Percent_Identity=22.3880597014925, Blast_Score=66, Evalue=8e-11, Organism=Escherichia coli, GI87082404, Length=397, Percent_Identity=26.9521410579345, Blast_Score=113, Evalue=3e-26, Organism=Escherichia coli, GI1786229, Length=399, Percent_Identity=24.5614035087719, Blast_Score=77, Evalue=3e-15, Organism=Escherichia coli, GI87082231, Length=470, Percent_Identity=23.6170212765957, Blast_Score=74, Evalue=3e-14,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR020846 - InterPro: IPR011701 - InterPro: IPR016196 - InterPro: IPR005829 [H]
Pfam domain/function: PF07690 MFS_1 [H]
EC number: NA
Molecular weight: Translated: 49435; Mature: 49304
Theoretical pI: Translated: 9.91; Mature: 9.91
Prosite motif: PS50850 MFS ; PS00217 SUGAR_TRANSPORT_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 3.5 %Met (Translated Protein) 4.2 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 3.3 %Met (Mature Protein) 4.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSQSGTTPGLASGGQNYAWYRELTGYHWFVLSVASMGWMFDTMAQQLFNLARKPAIKELL CCCCCCCCCCCCCCCCCHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHH GAGASNATIDQQAAWATSIFMIGWAIGGVFFGILGDRLGRAKTMTITILSYTIFTGLSVL CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEHHHHHHHHHHHHHHH STSVWDFNVYRFLCGLGVGGQFAVGVALVAEVVPQRARPYALGFVQAASAIGNMMAAFTG HHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHH IIVGQMEVAGTITGAWRWEFLAGAIPAPLAFIVFKKLKEPEQWLKARAEKKQMGSYSELF HHHHHHHHHEEEEHHHHHHHHHCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHCCCHHHHH NDPRWRKNAIVGFLLAFAGVVGLWGIGFFSYDLFRPVLERTFAAEGLAGKALSGKVTTWI CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHH GITSLLQNIGCFFGIYAFTYLTHYTGRKKAFAIAFLAAMGMTAYTFWNLKQISDIFWMIP HHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LMGFAQLSLFGGYSIYLAELFPTRLRSTGTSFCYNVGRFAAAAGPFTLGYLTKDVFGGYA HHHHHHHHHHCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCHHHHHHHHHHHCCHH EPMRYAGVAMSLVFLVGLAALPFAPETKGKPLPE HHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCC >Mature Secondary Structure SQSGTTPGLASGGQNYAWYRELTGYHWFVLSVASMGWMFDTMAQQLFNLARKPAIKELL CCCCCCCCCCCCCCCCHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHH GAGASNATIDQQAAWATSIFMIGWAIGGVFFGILGDRLGRAKTMTITILSYTIFTGLSVL CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEHHHHHHHHHHHHHHH STSVWDFNVYRFLCGLGVGGQFAVGVALVAEVVPQRARPYALGFVQAASAIGNMMAAFTG HHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHH IIVGQMEVAGTITGAWRWEFLAGAIPAPLAFIVFKKLKEPEQWLKARAEKKQMGSYSELF HHHHHHHHHEEEEHHHHHHHHHCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHCCCHHHHH NDPRWRKNAIVGFLLAFAGVVGLWGIGFFSYDLFRPVLERTFAAEGLAGKALSGKVTTWI CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHH GITSLLQNIGCFFGIYAFTYLTHYTGRKKAFAIAFLAAMGMTAYTFWNLKQISDIFWMIP HHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LMGFAQLSLFGGYSIYLAELFPTRLRSTGTSFCYNVGRFAAAAGPFTLGYLTKDVFGGYA HHHHHHHHHHCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCHHHHHHHHHHHCCHH EPMRYAGVAMSLVFLVGLAALPFAPETKGKPLPE HHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 9461415 [H]