| Definition | Candidatus Solibacter usitatus Ellin6076 chromosome, complete genome. |
|---|---|
| Accession | NC_008536 |
| Length | 9,965,640 |
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The map label for this gene is 116621744
Identifier: 116621744
GI number: 116621744
Start: 3321217
End: 3323307
Strand: Reverse
Name: 116621744
Synonym: Acid_2626
Alternate gene names: NA
Gene position: 3323307-3321217 (Counterclockwise)
Preceding gene: 116621746
Following gene: 116621743
Centisome position: 33.35
GC content: 64.13
Gene sequence:
>2091_bases ATGCAATTCCGAAACTGGCAACGATGGGCACTCTGCCTGACTGCCGCGGCCGTCCTGGCGCGCGGGGAAGAAGGCAAGTG GACGCCGCAGCAGCTGCTGCAGTTCGATGCCGCCTGGCTCAAGAAGCAGGGCCTCGAGCTGCCCGTCTCCCGCCTTTGGG ACCCGGCGCGGGGCACCGGGCTTCTCGCCGCTACCATCAGCACTGGAGGCTGCTCCGCCGGGTTCGTCACCAGTACAGGC CTGTTCCTGACTAATCATCACTGCCTCTTCGGCATCGTGCAGGAGCACAGCTCGCCGGCGCGCGACCTGATCACCAACGG TTTCATCGCCGGCTCCCGCGAGGAAGAACTGCGGGGCAAGGTCGCCCGCATCACGGTGCCGCATCGCTTCACTGACGTCA CCAAAGAAGTCAACGCCGCGGTCGCGGCGGGCGCCAACGATCTCGCGCGTTCCAAGGCCATCGAAGCCAGACAGAAGTCC CTGATTGCCGCCTGCGAGAAAAGCGACGGAATGCACTGCTCCGTCGCCACGTTCGATGGCGGCCTGCAATACGTTCTCAT CACCACCATCGAGCTCAGCGATATCCGCCTGGTGTACGCGCCGCCGCGCGCCATCGGCGAATTCGGCGGCGAGGCCGATA ATTTCCGCTGGCCGCGCCACACCGGCGATTTCGCCATCGGCCGCGCCTATAAGGACGGCAAACCTTACCAGCCGGAATTC TATTTCCCGATCGTGCGCACAGGCGTGAAGCCCAGCGATTTCGTGATGGTGCTCGGCTATCCAGGCCGCACCATCCGCTC TATGACGGCCGCCGAGATGGCCAACGAGCGCGACTTCCGTTTCAAACTCCGCGACGAAATATACGGGGAATGGATCCGCG CCATCGAAGAGAAAAGCAAGGGCAGCCCGCAGGGAGCCATCGCGGTAGCCGCCACACTGAAGACCCTCAACAACAGCCAC ACCAACGCCCAAGGACAGCTGGCCGGCCTGGCTCGCGGCCGCATTCTCGAAAAGCAGCAGGAGCAGGACGCGCTCGTCTC TTCGTGGGCCGGCCAGCACGCCGGCTTCGCGCCGTCCGTCGAAGCCAAGATGGATCTCGACCGGCTGGCTCTTCGCCGAC GCGGCGCCGCCACCCGCGAGTTCCTCTTCCAGATCATCAAGCCTGGTCCGCTCACCCTCTATCAGGCCACCACGCTGGTC CGCCTTTCCTTCGAACGCACCAAACCCGATGCCGAGCGCGATCCCGATTACATGAATCGCGAACTCCCCACGCTGAGCAG TCTTCTGGAACGCCAGCAGAAGAGCTACTACCGTCCCGCCGATGAGGCCATGCTGAAGGTGTGGGTGGATCGCGCCTGGA AACTCGGCGCCGTCGAACGCATTAAAGCTATAGACACACTCGTGCCGCGCGATCGCATTCCACAGACCGTCGCCGCGCTC TATGCCGGGACCAAGGTCACCGATCCCGTGGAGCGCGCCAAGATGTTCGAGGAGACGTCCGCGCAATTGCGCGCGCGCAA AGATCCGATGCTTGATCTCGCCTTCGCGCTCGAGCCCGAACTGCGCGCCTGGCAGGCGGAAACACAGGCCCAGGAGGGCG CCGTCGCCCGCCTGCGTCCGCTGTGGCGCCGCGCTGTGATCGCCCACGCAGGGAAGCCTGTCGCGCCGGACGCCAACAGC ACGCTGCGCGTCAGCTTCGCGCACGTCAAGGGCTATTCGCCCCGCGACGGCGTCCTCTACACGCCGCAAACCACTCTCGC CGGCATGATCGAAAAACGGGCCGACCAGGAGGAGTTCTCTATCCCCAGCTTCGTCCTGGATGCCGCCAGGCTCACCAAAC CCGAGCAGGTTCCACTCGATTTCCTGGCCGATGCCGATACTGCCGGCGGCAATTCCGGCAGCCCCGTGATCAACGGACGC GGCGAACTCGTCGGCCTCAACTTCGACCGCGTCTGGGAAAACGTCGCTAACGATTTCGGCTACAACCCCGATGTCGCGCG CAATGTCAGCGTCGATATCCGATTCATGACGTGGCTCCTCGAAGTGCAAAAAGCCGACTTCGTTTTGAGGGAACTCGCGC CCAAGCGCTGA
Upstream 100 bases:
>100_bases TCCGCCATTCCCCGGCGGCGCCCGCTGCCACGGTCAAACTCAAGCACAGTACTGTACCCGCCAAGATCGAATTCACAATG GCATTATCCTATTACTTCCT
Downstream 100 bases:
>100_bases CCGGCTGGGCAGCGACACTTAAATTACTGTGCTTGAGAGTCTTTGAGTGCCGCGGAGACTCCCAAGCGCCAGCGCGTCAG GCAGGCAAGCTGCACGTCGT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 696; Mature: 696
Protein sequence:
>696_residues MQFRNWQRWALCLTAAAVLARGEEGKWTPQQLLQFDAAWLKKQGLELPVSRLWDPARGTGLLAATISTGGCSAGFVTSTG LFLTNHHCLFGIVQEHSSPARDLITNGFIAGSREEELRGKVARITVPHRFTDVTKEVNAAVAAGANDLARSKAIEARQKS LIAACEKSDGMHCSVATFDGGLQYVLITTIELSDIRLVYAPPRAIGEFGGEADNFRWPRHTGDFAIGRAYKDGKPYQPEF YFPIVRTGVKPSDFVMVLGYPGRTIRSMTAAEMANERDFRFKLRDEIYGEWIRAIEEKSKGSPQGAIAVAATLKTLNNSH TNAQGQLAGLARGRILEKQQEQDALVSSWAGQHAGFAPSVEAKMDLDRLALRRRGAATREFLFQIIKPGPLTLYQATTLV RLSFERTKPDAERDPDYMNRELPTLSSLLERQQKSYYRPADEAMLKVWVDRAWKLGAVERIKAIDTLVPRDRIPQTVAAL YAGTKVTDPVERAKMFEETSAQLRARKDPMLDLAFALEPELRAWQAETQAQEGAVARLRPLWRRAVIAHAGKPVAPDANS TLRVSFAHVKGYSPRDGVLYTPQTTLAGMIEKRADQEEFSIPSFVLDAARLTKPEQVPLDFLADADTAGGNSGSPVINGR GELVGLNFDRVWENVANDFGYNPDVARNVSVDIRFMTWLLEVQKADFVLRELAPKR
Sequences:
>Translated_696_residues MQFRNWQRWALCLTAAAVLARGEEGKWTPQQLLQFDAAWLKKQGLELPVSRLWDPARGTGLLAATISTGGCSAGFVTSTG LFLTNHHCLFGIVQEHSSPARDLITNGFIAGSREEELRGKVARITVPHRFTDVTKEVNAAVAAGANDLARSKAIEARQKS LIAACEKSDGMHCSVATFDGGLQYVLITTIELSDIRLVYAPPRAIGEFGGEADNFRWPRHTGDFAIGRAYKDGKPYQPEF YFPIVRTGVKPSDFVMVLGYPGRTIRSMTAAEMANERDFRFKLRDEIYGEWIRAIEEKSKGSPQGAIAVAATLKTLNNSH TNAQGQLAGLARGRILEKQQEQDALVSSWAGQHAGFAPSVEAKMDLDRLALRRRGAATREFLFQIIKPGPLTLYQATTLV RLSFERTKPDAERDPDYMNRELPTLSSLLERQQKSYYRPADEAMLKVWVDRAWKLGAVERIKAIDTLVPRDRIPQTVAAL YAGTKVTDPVERAKMFEETSAQLRARKDPMLDLAFALEPELRAWQAETQAQEGAVARLRPLWRRAVIAHAGKPVAPDANS TLRVSFAHVKGYSPRDGVLYTPQTTLAGMIEKRADQEEFSIPSFVLDAARLTKPEQVPLDFLADADTAGGNSGSPVINGR GELVGLNFDRVWENVANDFGYNPDVARNVSVDIRFMTWLLEVQKADFVLRELAPKR >Mature_696_residues MQFRNWQRWALCLTAAAVLARGEEGKWTPQQLLQFDAAWLKKQGLELPVSRLWDPARGTGLLAATISTGGCSAGFVTSTG LFLTNHHCLFGIVQEHSSPARDLITNGFIAGSREEELRGKVARITVPHRFTDVTKEVNAAVAAGANDLARSKAIEARQKS LIAACEKSDGMHCSVATFDGGLQYVLITTIELSDIRLVYAPPRAIGEFGGEADNFRWPRHTGDFAIGRAYKDGKPYQPEF YFPIVRTGVKPSDFVMVLGYPGRTIRSMTAAEMANERDFRFKLRDEIYGEWIRAIEEKSKGSPQGAIAVAATLKTLNNSH TNAQGQLAGLARGRILEKQQEQDALVSSWAGQHAGFAPSVEAKMDLDRLALRRRGAATREFLFQIIKPGPLTLYQATTLV RLSFERTKPDAERDPDYMNRELPTLSSLLERQQKSYYRPADEAMLKVWVDRAWKLGAVERIKAIDTLVPRDRIPQTVAAL YAGTKVTDPVERAKMFEETSAQLRARKDPMLDLAFALEPELRAWQAETQAQEGAVARLRPLWRRAVIAHAGKPVAPDANS TLRVSFAHVKGYSPRDGVLYTPQTTLAGMIEKRADQEEFSIPSFVLDAARLTKPEQVPLDFLADADTAGGNSGSPVINGR GELVGLNFDRVWENVANDFGYNPDVARNVSVDIRFMTWLLEVQKADFVLRELAPKR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 77267; Mature: 77267
Theoretical pI: Translated: 9.14; Mature: 9.14
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQFRNWQRWALCLTAAAVLARGEEGKWTPQQLLQFDAAWLKKQGLELPVSRLWDPARGTG CCCCCHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHCCCCCCHHHCCCCCCCCE LLAATISTGGCSAGFVTSTGLFLTNHHCLFGIVQEHSSPARDLITNGFIAGSREEELRGK EEEEEEECCCCCCCCHHHCCEEEECCCCEEEEHHHCCCCHHHHHHCCCCCCCCHHHHCCC VARITVPHRFTDVTKEVNAAVAAGANDLARSKAIEARQKSLIAACEKSDGMHCSVATFDG EEEEECCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEECC GLQYVLITTIELSDIRLVYAPPRAIGEFGGEADNFRWPRHTGDFAIGRAYKDGKPYQPEF CEEEEEEEEEEEECEEEEEECCHHHHHCCCCCCCCCCCCCCCCCEECCCCCCCCCCCCCE YFPIVRTGVKPSDFVMVLGYPGRTIRSMTAAEMANERDFRFKLRDEIYGEWIRAIEEKSK ECHHHHCCCCCCCEEEEEECCCHHHHHHHHHHHCCCCCCEEEHHHHHHHHHHHHHHHHCC GSPQGAIAVAATLKTLNNSHTNAQGQLAGLARGRILEKQQEQDALVSSWAGQHAGFAPSV CCCCCHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCC EAKMDLDRLALRRRGAATREFLFQIIKPGPLTLYQATTLVRLSFERTKPDAERDPDYMNR HHHCCHHHHHHHHCCCHHHHHHHHHHCCCCEEEEEHEEEEEEEECCCCCCCCCCCHHHHC ELPTLSSLLERQQKSYYRPADEAMLKVWVDRAWKLGAVERIKAIDTLVPRDRIPQTVAAL CCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCHHHHHHH YAGTKVTDPVERAKMFEETSAQLRARKDPMLDLAFALEPELRAWQAETQAQEGAVARLRP HCCCCCCCHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCHHHHHHHHHHHHCCHHHHHHH LWRRAVIAHAGKPVAPDANSTLRVSFAHVKGYSPRDGVLYTPQTTLAGMIEKRADQEEFS HHHHHHHHHCCCCCCCCCCCEEEEEEEEECCCCCCCCEEECCCHHHHHHHHHHCCHHHHC IPSFVLDAARLTKPEQVPLDFLADADTAGGNSGSPVINGRGELVGLNFDRVWENVANDFG CHHHHHHHHHCCCCCCCCHHHHCCCCCCCCCCCCCEECCCCCEEECCHHHHHHHHHHHCC YNPDVARNVSVDIRFMTWLLEVQKADFVLRELAPKR CCCCCCCCCEEEHHHHHHHHHHHHHHHHHHHCCCCC >Mature Secondary Structure MQFRNWQRWALCLTAAAVLARGEEGKWTPQQLLQFDAAWLKKQGLELPVSRLWDPARGTG CCCCCHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHCCCCCCHHHCCCCCCCCE LLAATISTGGCSAGFVTSTGLFLTNHHCLFGIVQEHSSPARDLITNGFIAGSREEELRGK EEEEEEECCCCCCCCHHHCCEEEECCCCEEEEHHHCCCCHHHHHHCCCCCCCCHHHHCCC VARITVPHRFTDVTKEVNAAVAAGANDLARSKAIEARQKSLIAACEKSDGMHCSVATFDG EEEEECCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEECC GLQYVLITTIELSDIRLVYAPPRAIGEFGGEADNFRWPRHTGDFAIGRAYKDGKPYQPEF CEEEEEEEEEEEECEEEEEECCHHHHHCCCCCCCCCCCCCCCCCEECCCCCCCCCCCCCE YFPIVRTGVKPSDFVMVLGYPGRTIRSMTAAEMANERDFRFKLRDEIYGEWIRAIEEKSK ECHHHHCCCCCCCEEEEEECCCHHHHHHHHHHHCCCCCCEEEHHHHHHHHHHHHHHHHCC GSPQGAIAVAATLKTLNNSHTNAQGQLAGLARGRILEKQQEQDALVSSWAGQHAGFAPSV CCCCCHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCC EAKMDLDRLALRRRGAATREFLFQIIKPGPLTLYQATTLVRLSFERTKPDAERDPDYMNR HHHCCHHHHHHHHCCCHHHHHHHHHHCCCCEEEEEHEEEEEEEECCCCCCCCCCCHHHHC ELPTLSSLLERQQKSYYRPADEAMLKVWVDRAWKLGAVERIKAIDTLVPRDRIPQTVAAL CCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCHHHHHHH YAGTKVTDPVERAKMFEETSAQLRARKDPMLDLAFALEPELRAWQAETQAQEGAVARLRP HCCCCCCCHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCHHHHHHHHHHHHCCHHHHHHH LWRRAVIAHAGKPVAPDANSTLRVSFAHVKGYSPRDGVLYTPQTTLAGMIEKRADQEEFS HHHHHHHHHCCCCCCCCCCCEEEEEEEEECCCCCCCCEEECCCHHHHHHHHHHCCHHHHC IPSFVLDAARLTKPEQVPLDFLADADTAGGNSGSPVINGRGELVGLNFDRVWENVANDFG CHHHHHHHHHCCCCCCCCHHHHCCCCCCCCCCCCCEECCCCCEEECCHHHHHHHHHHHCC YNPDVARNVSVDIRFMTWLLEVQKADFVLRELAPKR CCCCCCCCCEEEHHHHHHHHHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA