Click here to switch to the map view.

The map label for this gene is 116621742

Identifier: 116621742

GI number: 116621742

Start: 3316985

End: 3318511

Strand: Reverse

Name: 116621742

Synonym: Acid_2624

Alternate gene names: NA

Gene position: 3318511-3316985 (Counterclockwise)

Preceding gene: 116621743

Following gene: 116621741

Centisome position: 33.3

GC content: 63.98

Gene sequence:

>1527_bases
ATGCGCTGGCACACGCTATTTTTCCTTATCATTCTGTCTACACCTTCCGCCGGACAAATCGGCGCACCTCAATCTCCCGG
TCAGTTGCCCCGGGCGCAACCCGTGCCCCTGTCGGGCAAGCCACAAATTGGTAGCGTCGTTCCCCAGCAAACGCCCACTC
CCGGCGCCACCAACTCCGTCAACACCATCAATCCGTCCGTTCAAGTACAAGGCGCCTACCAGGGTAGCGTTCCCGCAGGC
ACCTCGACCTCCACGCCGCTCGCCCTCTCGCTGGAGGACGCGGTCAAGCGCGGCATCCAATACAATCTCGGATCCGTCAC
CGCGTCCGACGCCACTCGCCAGGCGCGCGCCCTGCGTCTTGCCGCGCTCGCCGAATTATTGCCGGACCTCACCGGTAATG
TTCGCGAGACTGTGCAACAAATCGACCTCGCCATCACCGGCCTGCGCCTCAACCTACCCCTCCCCGGCTTTCGATTTCCT
GCCATCGTCGGTCCTTTCAACTACTTCGATACCCGCGCGAATTTCACTGAGAGCCTCAGCGTCACCGGCGTACGCAACTG
GCAAGCCAGCCGTGAAAATCTTAGCTCGTCCGAGTTCAACATACAGGACAGCCGCGACCTTGTCGCCTTCGCGGTCGCCG
GCACATACCTCCAGATCCTCGCCTCCGCCGCCCGCATCCTGACCGCCAACGCCCAGATCGAAACCTCGCGCGCCGTCTAC
ACGCAGGCGGTCGATCGCAATCGGAGCGGCCTCATTGCCCACATCGATGTCAGCCGCAGTCTCGTCGAACTGCAGACTCA
GCAGCAGCGCCTCACTTCCCTCACCAACGATTTCGAAAAGCAAAAACTTACTCTCGCCAGATTGATCGGCCTCCCCATGG
CCCAGCCCTTCACACTCTCCGACGCCATCCCCTATCGCGAAATGCCGCCCGTCGATATCGCCGCCCTTATTCACACCGCT
ATTAGCGCGCGCCACGACGTGCAGGCGGCCGCCGCCCAAGTCAAAGCCGCCGAACTATCCCGCAAGGCCGCCGTCGCCGA
GCACCTCCCCTTCCTCGACGTCGCCGCCGACTACGGCATCACCGGTATCAACCCTTCGCAATCCCACGGCACCTTCGCGG
TCACCGGCTCTGTCCGTTTCCCGATCTACCGCTCCGGCCGCATTCGCGCCGATATCGAGCAGGCCGACGCCGCGCTCTCG
CAGCGCCGAGCCGAGTACGAGGATACGAAGGCGCGCGCGGAGCAGGACGTCCGCAATGCCGTGCTCGATCTCAACGCCGC
ATCGCAGCAGGTTCGCGTCGCCGAATCCAATCGCGGCCTTGCCGCCGAAACCCTGCAACAGTCCCGCGACCGCTTCCGCG
CCGGGGTAACCGATACCGTCGAACTCGTGCAGGCGCAGGAATCCGTGGCCACCGCCGAGCAGGATTTCATCAGCGCGCTC
TTCGCCTTCAACCTCGCGCGCGTGGCCCTCGCCCGCGCCACCGCGCAAACCGAGCAAGGCGTTACCCGCCTGCTGCGAGA
AAGGTGA

Upstream 100 bases:

>100_bases
GCGAGGCAGTGAATCCTGGCTGCAGCGCCTCTGCGTATTCCTCTGAATTTGTTCGTTCCGCAACTGCGGCCTCCTACGTG
CCCGCGCAGAATAGATCGCC

Downstream 100 bases:

>100_bases
GCCATGGTAGACGACCGAACCCCTTATGCATCGCACCAGGAAATCGAACAACTGCGCGACGAGCTTCGCCGTCTGAAAGA
AGAGCAGGAAAAGCAAAAGA

Product: outer membrane efflux protein

Products: NA

Alternate protein names: Outer Membrane Efflux Protein Family

Number of amino acids: Translated: 508; Mature: 508

Protein sequence:

>508_residues
MRWHTLFFLIILSTPSAGQIGAPQSPGQLPRAQPVPLSGKPQIGSVVPQQTPTPGATNSVNTINPSVQVQGAYQGSVPAG
TSTSTPLALSLEDAVKRGIQYNLGSVTASDATRQARALRLAALAELLPDLTGNVRETVQQIDLAITGLRLNLPLPGFRFP
AIVGPFNYFDTRANFTESLSVTGVRNWQASRENLSSSEFNIQDSRDLVAFAVAGTYLQILASAARILTANAQIETSRAVY
TQAVDRNRSGLIAHIDVSRSLVELQTQQQRLTSLTNDFEKQKLTLARLIGLPMAQPFTLSDAIPYREMPPVDIAALIHTA
ISARHDVQAAAAQVKAAELSRKAAVAEHLPFLDVAADYGITGINPSQSHGTFAVTGSVRFPIYRSGRIRADIEQADAALS
QRRAEYEDTKARAEQDVRNAVLDLNAASQQVRVAESNRGLAAETLQQSRDRFRAGVTDTVELVQAQESVATAEQDFISAL
FAFNLARVALARATAQTEQGVTRLLRER

Sequences:

>Translated_508_residues
MRWHTLFFLIILSTPSAGQIGAPQSPGQLPRAQPVPLSGKPQIGSVVPQQTPTPGATNSVNTINPSVQVQGAYQGSVPAG
TSTSTPLALSLEDAVKRGIQYNLGSVTASDATRQARALRLAALAELLPDLTGNVRETVQQIDLAITGLRLNLPLPGFRFP
AIVGPFNYFDTRANFTESLSVTGVRNWQASRENLSSSEFNIQDSRDLVAFAVAGTYLQILASAARILTANAQIETSRAVY
TQAVDRNRSGLIAHIDVSRSLVELQTQQQRLTSLTNDFEKQKLTLARLIGLPMAQPFTLSDAIPYREMPPVDIAALIHTA
ISARHDVQAAAAQVKAAELSRKAAVAEHLPFLDVAADYGITGINPSQSHGTFAVTGSVRFPIYRSGRIRADIEQADAALS
QRRAEYEDTKARAEQDVRNAVLDLNAASQQVRVAESNRGLAAETLQQSRDRFRAGVTDTVELVQAQESVATAEQDFISAL
FAFNLARVALARATAQTEQGVTRLLRER
>Mature_508_residues
MRWHTLFFLIILSTPSAGQIGAPQSPGQLPRAQPVPLSGKPQIGSVVPQQTPTPGATNSVNTINPSVQVQGAYQGSVPAG
TSTSTPLALSLEDAVKRGIQYNLGSVTASDATRQARALRLAALAELLPDLTGNVRETVQQIDLAITGLRLNLPLPGFRFP
AIVGPFNYFDTRANFTESLSVTGVRNWQASRENLSSSEFNIQDSRDLVAFAVAGTYLQILASAARILTANAQIETSRAVY
TQAVDRNRSGLIAHIDVSRSLVELQTQQQRLTSLTNDFEKQKLTLARLIGLPMAQPFTLSDAIPYREMPPVDIAALIHTA
ISARHDVQAAAAQVKAAELSRKAAVAEHLPFLDVAADYGITGINPSQSHGTFAVTGSVRFPIYRSGRIRADIEQADAALS
QRRAEYEDTKARAEQDVRNAVLDLNAASQQVRVAESNRGLAAETLQQSRDRFRAGVTDTVELVQAQESVATAEQDFISAL
FAFNLARVALARATAQTEQGVTRLLRER

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 54809; Mature: 54809

Theoretical pI: Translated: 9.21; Mature: 9.21

Prosite motif: PS00018 EF_HAND_1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
0.6 %Met     (Translated Protein)
0.6 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.6 %Met     (Mature Protein)
0.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRWHTLFFLIILSTPSAGQIGAPQSPGQLPRAQPVPLSGKPQIGSVVPQQTPTPGATNSV
CCHHHEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
NTINPSVQVQGAYQGSVPAGTSTSTPLALSLEDAVKRGIQYNLGSVTASDATRQARALRL
CCCCCCEEEEEEECCCCCCCCCCCCCEEEEHHHHHHCCCEECCCCEEHHHHHHHHHHHHH
AALAELLPDLTGNVRETVQQIDLAITGLRLNLPLPGFRFPAIVGPFNYFDTRANFTESLS
HHHHHHHHHCCCHHHHHHHHHHHHEEEEEEECCCCCCCCCHHCCCCHHHCCCCCCCCCEE
VTGVRNWQASRENLSSSEFNIQDSRDLVAFAVAGTYLQILASAARILTANAQIETSRAVY
EEEECCCHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCEEHHHHHH
TQAVDRNRSGLIAHIDVSRSLVELQTQQQRLTSLTNDFEKQKLTLARLIGLPMAQPFTLS
HHHHCCCCCCEEEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCC
DAIPYREMPPVDIAALIHTAISARHDVQAAAAQVKAAELSRKAAVAEHLPFLDVAADYGI
CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHCCCC
TGINPSQSHGTFAVTGSVRFPIYRSGRIRADIEQADAALSQRRAEYEDTKARAEQDVRNA
CCCCCCCCCCCEEEECCEEECEEECCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VLDLNAASQQVRVAESNRGLAAETLQQSRDRFRAGVTDTVELVQAQESVATAEQDFISAL
HHCCCCCCHHEEEECCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHH
FAFNLARVALARATAQTEQGVTRLLRER
HHHHHHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MRWHTLFFLIILSTPSAGQIGAPQSPGQLPRAQPVPLSGKPQIGSVVPQQTPTPGATNSV
CCHHHEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
NTINPSVQVQGAYQGSVPAGTSTSTPLALSLEDAVKRGIQYNLGSVTASDATRQARALRL
CCCCCCEEEEEEECCCCCCCCCCCCCEEEEHHHHHHCCCEECCCCEEHHHHHHHHHHHHH
AALAELLPDLTGNVRETVQQIDLAITGLRLNLPLPGFRFPAIVGPFNYFDTRANFTESLS
HHHHHHHHHCCCHHHHHHHHHHHHEEEEEEECCCCCCCCCHHCCCCHHHCCCCCCCCCEE
VTGVRNWQASRENLSSSEFNIQDSRDLVAFAVAGTYLQILASAARILTANAQIETSRAVY
EEEECCCHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCEEHHHHHH
TQAVDRNRSGLIAHIDVSRSLVELQTQQQRLTSLTNDFEKQKLTLARLIGLPMAQPFTLS
HHHHCCCCCCEEEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCC
DAIPYREMPPVDIAALIHTAISARHDVQAAAAQVKAAELSRKAAVAEHLPFLDVAADYGI
CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHCCCC
TGINPSQSHGTFAVTGSVRFPIYRSGRIRADIEQADAALSQRRAEYEDTKARAEQDVRNA
CCCCCCCCCCCEEEECCEEECEEECCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VLDLNAASQQVRVAESNRGLAAETLQQSRDRFRAGVTDTVELVQAQESVATAEQDFISAL
HHCCCCCCHHEEEECCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHH
FAFNLARVALARATAQTEQGVTRLLRER
HHHHHHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA