| Definition | Candidatus Solibacter usitatus Ellin6076 chromosome, complete genome. |
|---|---|
| Accession | NC_008536 |
| Length | 9,965,640 |
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The map label for this gene is 116621733
Identifier: 116621733
GI number: 116621733
Start: 3300871
End: 3301854
Strand: Direct
Name: 116621733
Synonym: Acid_2615
Alternate gene names: NA
Gene position: 3300871-3301854 (Clockwise)
Preceding gene: 116621731
Following gene: 116621735
Centisome position: 33.12
GC content: 62.7
Gene sequence:
>984_bases ATGGCAGTCAGATTGATACTTCCCGCCCTCTTCGCAGCGGCGCTTTCCGCGCAGTCGATTGACCGTACCTTCTACTTCAC GCATGGCGAATCGCCGCAGAACCTGCAGGAGATCGTGAACATCGTCCGCGGCGTCGGGATCATTTCCCAGGTCACCTCCC AGCCCGCGAAAGACTCCGTCACGGTCACCGGTACTGCCGAGCAGATCGCCCTCGCCGACTGGCTTTGCCACCAGCTGAGC CAGCCCGGCGACGGCCAGCAGCCCCAGGAGTACCGCGTTCCCGGCAGCGATCTACCCGTGGTGCACGTCTATTTCCTTGC CAACGTGATCACCCCGCAAGACCTGCAGGAAGTCACCAACGCGACGCGCTCCATCACCGACATCCAACGCGCATTCCCGT ACGCCCACCTGCAAGCCCTCGCGCTTCGCGGCACCGCGGATCAGATCGGGGCGGCCGACTGGATGGTCCGCGAACTGAAC CAGGCCGGACCCGGTCAAAACTCGCAGGAGTTTCCGCTGCCGCTCGCCGCCCCGCGCAAAGAGGTCGCCAAAGTCTTCTA CGTGAAGAACACGCTGACACTGCAGGGTATCCAGGAAATGGTGAACATGACGCGTTCGATCGCCGATATTCAGCGCTTCT TCCCGTACAATGCCCGTCACGCAATCGTGGCGCGCGGTTCGGCGGAACAGATCGCTCTCGCCTCCTGGCTGGTGCAATTG CTGGATCAGTCATTAATGGATCGACCCACCGGCCAGCCGGTGAACGAATACCGGGTGACCGGCGACCGGAATCCGATCGT CAGCCTCGTCTACCTCGCCGACAACCAGCCGCCGCAATCCGTGCAGGAGATCGTTAGCACGGTGCGCACGGCCACCGAGA TGCAGCGTATCTTCGGCAGTCCGTTTTGCCATGCTGTTGCCATGCGCGGTACCGCCGACCAAGTCGCCCGCGCCGGCGAG CTCATCAAAACGCTCACCAGATAG
Upstream 100 bases:
>100_bases CCAGACCCGATAACCACACTTTCCACATGGCGAACTCCATTCTACTTTCCCTCCACGCTTTTCCCCAATCCCGCGTCATC CGCACAGAGGCCCGTTCCAT
Downstream 100 bases:
>100_bases TCAGGCCTTCGTCACCGCCGCGATCTCGTAATCGGCGATCGAGGGAAGCGTGAACTCGAGCGTCTGTCCCGTCATCTTGT GTTTCACATCCACTCCCGCG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 327; Mature: 326
Protein sequence:
>327_residues MAVRLILPALFAAALSAQSIDRTFYFTHGESPQNLQEIVNIVRGVGIISQVTSQPAKDSVTVTGTAEQIALADWLCHQLS QPGDGQQPQEYRVPGSDLPVVHVYFLANVITPQDLQEVTNATRSITDIQRAFPYAHLQALALRGTADQIGAADWMVRELN QAGPGQNSQEFPLPLAAPRKEVAKVFYVKNTLTLQGIQEMVNMTRSIADIQRFFPYNARHAIVARGSAEQIALASWLVQL LDQSLMDRPTGQPVNEYRVTGDRNPIVSLVYLADNQPPQSVQEIVSTVRTATEMQRIFGSPFCHAVAMRGTADQVARAGE LIKTLTR
Sequences:
>Translated_327_residues MAVRLILPALFAAALSAQSIDRTFYFTHGESPQNLQEIVNIVRGVGIISQVTSQPAKDSVTVTGTAEQIALADWLCHQLS QPGDGQQPQEYRVPGSDLPVVHVYFLANVITPQDLQEVTNATRSITDIQRAFPYAHLQALALRGTADQIGAADWMVRELN QAGPGQNSQEFPLPLAAPRKEVAKVFYVKNTLTLQGIQEMVNMTRSIADIQRFFPYNARHAIVARGSAEQIALASWLVQL LDQSLMDRPTGQPVNEYRVTGDRNPIVSLVYLADNQPPQSVQEIVSTVRTATEMQRIFGSPFCHAVAMRGTADQVARAGE LIKTLTR >Mature_326_residues AVRLILPALFAAALSAQSIDRTFYFTHGESPQNLQEIVNIVRGVGIISQVTSQPAKDSVTVTGTAEQIALADWLCHQLSQ PGDGQQPQEYRVPGSDLPVVHVYFLANVITPQDLQEVTNATRSITDIQRAFPYAHLQALALRGTADQIGAADWMVRELNQ AGPGQNSQEFPLPLAAPRKEVAKVFYVKNTLTLQGIQEMVNMTRSIADIQRFFPYNARHAIVARGSAEQIALASWLVQLL DQSLMDRPTGQPVNEYRVTGDRNPIVSLVYLADNQPPQSVQEIVSTVRTATEMQRIFGSPFCHAVAMRGTADQVARAGEL IKTLTR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 35942; Mature: 35811
Theoretical pI: Translated: 6.52; Mature: 6.52
Prosite motif: PS00430 TONB_DEPENDENT_REC_1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAVRLILPALFAAALSAQSIDRTFYFTHGESPQNLQEIVNIVRGVGIISQVTSQPAKDSV CCHHHHHHHHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCE TVTGTAEQIALADWLCHQLSQPGDGQQPQEYRVPGSDLPVVHVYFLANVITPQDLQEVTN EEECCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCHHHHHHHHH ATRSITDIQRAFPYAHLQALALRGTADQIGAADWMVRELNQAGPGQNSQEFPLPLAAPRK HHHHHHHHHHHCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHH EVAKVFYVKNTLTLQGIQEMVNMTRSIADIQRFFPYNARHAIVARGSAEQIALASWLVQL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCHHHHHHHHHHHHH LDQSLMDRPTGQPVNEYRVTGDRNPIVSLVYLADNQPPQSVQEIVSTVRTATEMQRIFGS HHHHHHCCCCCCCCHHEEECCCCCCEEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHCC PFCHAVAMRGTADQVARAGELIKTLTR HHHHHHHHCCCHHHHHHHHHHHHHHCC >Mature Secondary Structure AVRLILPALFAAALSAQSIDRTFYFTHGESPQNLQEIVNIVRGVGIISQVTSQPAKDSV CHHHHHHHHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCE TVTGTAEQIALADWLCHQLSQPGDGQQPQEYRVPGSDLPVVHVYFLANVITPQDLQEVTN EEECCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCHHHHHHHHH ATRSITDIQRAFPYAHLQALALRGTADQIGAADWMVRELNQAGPGQNSQEFPLPLAAPRK HHHHHHHHHHHCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHH EVAKVFYVKNTLTLQGIQEMVNMTRSIADIQRFFPYNARHAIVARGSAEQIALASWLVQL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCHHHHHHHHHHHHH LDQSLMDRPTGQPVNEYRVTGDRNPIVSLVYLADNQPPQSVQEIVSTVRTATEMQRIFGS HHHHHHCCCCCCCCHHEEECCCCCCEEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHCC PFCHAVAMRGTADQVARAGELIKTLTR HHHHHHHHCCCHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA