| Definition | Candidatus Solibacter usitatus Ellin6076 chromosome, complete genome. |
|---|---|
| Accession | NC_008536 |
| Length | 9,965,640 |
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The map label for this gene is 116621665
Identifier: 116621665
GI number: 116621665
Start: 3225493
End: 3226011
Strand: Direct
Name: 116621665
Synonym: Acid_2547
Alternate gene names: NA
Gene position: 3225493-3226011 (Clockwise)
Preceding gene: 116621664
Following gene: 116621666
Centisome position: 32.37
GC content: 66.28
Gene sequence:
>519_bases ATGAAGCATTTGTGTTCGGAAGAGATTACGGCGTGGGTGGCCGGTGAGCGGAGGGCGGCGGCGGAGCGCCATCTCGACGA GTGCGCGCAGTGCGCCGGGGAGGTTGTGAATGCGCAGAACGCGATTGCGCTGTTTGGCGAATCGACCCTGTTGTGGAGTG CGCATCTCGAGAAGTCCGTGCCGCGCGGGCGTGCAGCCTCGAGGGGCCCGGTGCGGTTCGCCTTCACGCTGGCGGCTTGC GTGATTGTGGCACTGGCGCTCAGCAGGCCGGCGGCGCCGAAGCGCGCGAACTCGGGCGAGCCGTTTGTGGCCTTCCCGTA CGTGGCGCCGCTGGCGCCTTACGAGCGTGCGCAGATTCAACGAATGGATATCCCGGTGGCGGCGCTGGCGGCCGCTGGTT TTCAACTGCGCGGGCCGGACACGGCCGGCGTGGTTCGGGCGGACGTACTGCTGGGGCAGGATGGCCGCGCCTATGCATTG CGATTCACATCTCAGCACGATTGGAGTCTCATTCAATGA
Upstream 100 bases:
>100_bases CGGCGGAGATCGAGGCGGCGACCGGGATCAGCCGGGCAGCGATCAAGGTGCACCTGTTCCGGGCGGTTCATGCAATCCGG GAGAAATTGGGGAAAACGCG
Downstream 100 bases:
>100_bases CGAAGCAATTCCTGATACTTCCCGCCTTCGCCGCCCTGGCGGCGGTCTCAGTGTTCGCACAGGCCGCCACCGGGTGGACG TCCACTTTCAGCACTACGGG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 172; Mature: 172
Protein sequence:
>172_residues MKHLCSEEITAWVAGERRAAAERHLDECAQCAGEVVNAQNAIALFGESTLLWSAHLEKSVPRGRAASRGPVRFAFTLAAC VIVALALSRPAAPKRANSGEPFVAFPYVAPLAPYERAQIQRMDIPVAALAAAGFQLRGPDTAGVVRADVLLGQDGRAYAL RFTSQHDWSLIQ
Sequences:
>Translated_172_residues MKHLCSEEITAWVAGERRAAAERHLDECAQCAGEVVNAQNAIALFGESTLLWSAHLEKSVPRGRAASRGPVRFAFTLAAC VIVALALSRPAAPKRANSGEPFVAFPYVAPLAPYERAQIQRMDIPVAALAAAGFQLRGPDTAGVVRADVLLGQDGRAYAL RFTSQHDWSLIQ >Mature_172_residues MKHLCSEEITAWVAGERRAAAERHLDECAQCAGEVVNAQNAIALFGESTLLWSAHLEKSVPRGRAASRGPVRFAFTLAAC VIVALALSRPAAPKRANSGEPFVAFPYVAPLAPYERAQIQRMDIPVAALAAAGFQLRGPDTAGVVRADVLLGQDGRAYAL RFTSQHDWSLIQ
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 18479; Mature: 18479
Theoretical pI: Translated: 8.34; Mature: 8.34
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.3 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 2.3 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKHLCSEEITAWVAGERRAAAERHLDECAQCAGEVVNAQNAIALFGESTLLWSAHLEKSV CCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCEEEEHHHHHHCC PRGRAASRGPVRFAFTLAACVIVALALSRPAAPKRANSGEPFVAFPYVAPLAPYERAQIQ CCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEECCCCCCCCCHHHHHHH RMDIPVAALAAAGFQLRGPDTAGVVRADVLLGQDGRAYALRFTSQHDWSLIQ HCCCCHHHHHHCCEEEECCCCCCEEEEEEEECCCCCEEEEEECCCCCCCCCC >Mature Secondary Structure MKHLCSEEITAWVAGERRAAAERHLDECAQCAGEVVNAQNAIALFGESTLLWSAHLEKSV CCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCEEEEHHHHHHCC PRGRAASRGPVRFAFTLAACVIVALALSRPAAPKRANSGEPFVAFPYVAPLAPYERAQIQ CCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEECCCCCCCCCHHHHHHH RMDIPVAALAAAGFQLRGPDTAGVVRADVLLGQDGRAYALRFTSQHDWSLIQ HCCCCHHHHHHCCEEEECCCCCCEEEEEEEECCCCCEEEEEECCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA