| Definition | Candidatus Solibacter usitatus Ellin6076 chromosome, complete genome. |
|---|---|
| Accession | NC_008536 |
| Length | 9,965,640 |
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The map label for this gene is 116621652
Identifier: 116621652
GI number: 116621652
Start: 3212607
End: 3213266
Strand: Direct
Name: 116621652
Synonym: Acid_2534
Alternate gene names: NA
Gene position: 3212607-3213266 (Clockwise)
Preceding gene: 116621649
Following gene: 116621655
Centisome position: 32.24
GC content: 62.73
Gene sequence:
>660_bases ATGATTTCCCAAAAACGCAGTCAAGCCGCCCGCATCAATGGCGCCAAATCTCGCGGACCCGTCACCGCCGAAGGCAAAGC CATCTCCGCCCGCAACGCCATGCGCCACGGATTCCTCGCCAAAACCGTCGTCCTCTGTAACGAAGACGCAAAAACCTTCG AAGCCCTCTTCTATCTCCTCATCCAACGCTTCAGCCCCGTGGACGATATCGAAATGTCCGCCATCGAGGAAATGGCCGCC GCCCACTGGCGCATGCGCCGCGTCATGAACATGGAGCACGCCCTGCTCGATTCCGTCATCCGCGAGAATCTCGACAATGA AGTACCCGGCGAACAGACCCTCGCCGCCTTCACCGATCCCGCCAGCCAGGCCACCCTCGCTCTTCTCCAACGCTACGAGG CCCGCTTCCAGAACATGTACCACCGTGCCCTCCGCAGCCTCGTCGTCCTCCGCAAACTCCCCGTGCGCACAGCGGAGCCA AACGAACCCAAGACCCCCAATCTTTGCAACACGGAACTCCCCGAACCCACGCCCATCCGTCCCGCCGAACCCGCCGAACC GTCGGCGGCACAGCCTGCGGAGCACACCGACCCCCTGATCCTCCCGCTCATCTCGACCGACCCGGAGTTCCTCCCCCTCG ATCCCGACATTTTCCGCTGA
Upstream 100 bases:
>100_bases TGTCCGTTACTGGGAAATTTTCTTAAAGAACCAATCACTTACAAGAAAAAGACTTGACAGCCCGAATATCGTGAAAGTAG GAAGGGTATTTCACACATTC
Downstream 100 bases:
>100_bases AATCGACGCGGAAATGCCCGGTTTGATCCTCGATCTCAGCTGTCGCGACGCACCGGTCGCGATCCGTGTGTCCCGGCAGC GTAATTCTCAGTAGCGGCGC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 219; Mature: 219
Protein sequence:
>219_residues MISQKRSQAARINGAKSRGPVTAEGKAISARNAMRHGFLAKTVVLCNEDAKTFEALFYLLIQRFSPVDDIEMSAIEEMAA AHWRMRRVMNMEHALLDSVIRENLDNEVPGEQTLAAFTDPASQATLALLQRYEARFQNMYHRALRSLVVLRKLPVRTAEP NEPKTPNLCNTELPEPTPIRPAEPAEPSAAQPAEHTDPLILPLISTDPEFLPLDPDIFR
Sequences:
>Translated_219_residues MISQKRSQAARINGAKSRGPVTAEGKAISARNAMRHGFLAKTVVLCNEDAKTFEALFYLLIQRFSPVDDIEMSAIEEMAA AHWRMRRVMNMEHALLDSVIRENLDNEVPGEQTLAAFTDPASQATLALLQRYEARFQNMYHRALRSLVVLRKLPVRTAEP NEPKTPNLCNTELPEPTPIRPAEPAEPSAAQPAEHTDPLILPLISTDPEFLPLDPDIFR >Mature_219_residues MISQKRSQAARINGAKSRGPVTAEGKAISARNAMRHGFLAKTVVLCNEDAKTFEALFYLLIQRFSPVDDIEMSAIEEMAA AHWRMRRVMNMEHALLDSVIRENLDNEVPGEQTLAAFTDPASQATLALLQRYEARFQNMYHRALRSLVVLRKLPVRTAEP NEPKTPNLCNTELPEPTPIRPAEPAEPSAAQPAEHTDPLILPLISTDPEFLPLDPDIFR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 24519; Mature: 24519
Theoretical pI: Translated: 6.04; Mature: 6.04
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 3.7 %Met (Translated Protein) 4.6 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 3.7 %Met (Mature Protein) 4.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MISQKRSQAARINGAKSRGPVTAEGKAISARNAMRHGFLAKTVVLCNEDAKTFEALFYLL CCCCHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHEECCCHHHHHHHHHHH IQRFSPVDDIEMSAIEEMAAAHWRMRRVMNMEHALLDSVIRENLDNEVPGEQTLAAFTDP HHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHCCC ASQATLALLQRYEARFQNMYHRALRSLVVLRKLPVRTAEPNEPKTPNLCNTELPEPTPIR HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCC PAEPAEPSAAQPAEHTDPLILPLISTDPEFLPLDPDIFR CCCCCCCCCCCCCCCCCCEEEEEECCCCCEECCCHHHCC >Mature Secondary Structure MISQKRSQAARINGAKSRGPVTAEGKAISARNAMRHGFLAKTVVLCNEDAKTFEALFYLL CCCCHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHEECCCHHHHHHHHHHH IQRFSPVDDIEMSAIEEMAAAHWRMRRVMNMEHALLDSVIRENLDNEVPGEQTLAAFTDP HHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHCCC ASQATLALLQRYEARFQNMYHRALRSLVVLRKLPVRTAEPNEPKTPNLCNTELPEPTPIR HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCC PAEPAEPSAAQPAEHTDPLILPLISTDPEFLPLDPDIFR CCCCCCCCCCCCCCCCCCEEEEEECCCCCEECCCHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA