| Definition | Candidatus Solibacter usitatus Ellin6076 chromosome, complete genome. |
|---|---|
| Accession | NC_008536 |
| Length | 9,965,640 |
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The map label for this gene is pucG [H]
Identifier: 116621633
GI number: 116621633
Start: 3188332
End: 3189456
Strand: Direct
Name: pucG [H]
Synonym: Acid_2515
Alternate gene names: 116621633
Gene position: 3188332-3189456 (Clockwise)
Preceding gene: 116621632
Following gene: 116621635
Centisome position: 31.99
GC content: 64.89
Gene sequence:
>1125_bases ATGCCGCAAAGCTATCCTGCGATTCAGGCGCCGCCGCGCCTTCTCTTCGGACCCGGACCCAGCATGGTCGCGCCCCGCGT CTATCAGGCGATGTCACAGCCCGTGGTGGGGCATCTGGATCCATTCTTTTTTCAGGTGGTGGAAGAGGTCCGCGGCCTGC TCGGGTATGCCTACTCGACGAAGAATCATTTCAACCTCGCGACCTCTGGTACCGGCACCTCGGGGATGGAATGCGCGGTC GCGAACTTCACCGAGCCCGGCGATAAATTTGCGCTGCTGACCAACGGATTTTTCGGCGATCGCATCGGCGATATGGCGCG GCGTCATGGCGGCGAGGTGGTGCGGCTCACGAAGCCTTGGGGCGAGCCGTTCGATGCGCAGGAGGTCCGCGAATTCATCC GCCGGGAACGGCCGCGGGTGGTGGCGTTCGTGCAGGCCGAGACCTCGACCGGGATGTTCAACCAGGCGAAGCCGATCTGC GACGCGGCGCGCGAAGTGGACGCGGTGACGATCGCCGATTGCGTCACGTCGCTGGGCGGAATGCCGGTGCTGGTGGATGA GAACGGGATCGACATCGCGTACAGCTGCTCGCAGAAGGGCCTCGGGTGCCCGCCCGGACTGGCGCCGATGACGGTGGGGC CGCGCGCGCTGGGGCGGCTGAAGGAGCGCAAGGCTCCGGTGCAGTCCTTCTACCTGGACCTGCAGCTGCTCGACAGTTTC TATTGCGGAAAGAAGTATCACCACACCGCGTCGGCCACGATGTTCTACGCGCTGCGCGAGGGCCTGGCGATTGTCGCGGA GGAGGGGCTGGAGGCGCGGTGGGCGCGTCACAAGGCAAACCACGAGGCGTTCGTGAAGGGGATCGAGGCGATGGGTTTGA GCATGCTGGTGCCGGAAGGCCACCGGCTGTGGACGTTGAATACGCCGCGGATTCCCGAGGGCGTGGACGATGCCAAGGTG CGGCAGTTCCTGCTGGAGCAGTACAACATGGAAATCGCCGGGGGCTTCGGTCCTCTGGCGGGCAAGGTCTTCCGCATCGG CACCATGGGCTATAGCTCAACGGCGGAGAACGTGCAGCTCATTCTCCAGGCGCTGGAAGAGGCGCTGAAGGCGGCGAAGG CATAG
Upstream 100 bases:
>100_bases CAGCGTGGCCGAGCAGCTGGCGGCTTCCTGCGCGCAGATGCAAAGATAACGGCAACGTAGCCGCAACGTCTTTTTCTGCC GCGGGCTACACTAGTTGCTT
Downstream 100 bases:
>100_bases AGATCTCCGATCGCCTGCGCGATTCGCTCACCCCATCAGAGCCGCGACCGTCAGGGAGCGTCCTTGCTAACTCAACTAAC CGCCCAGCCTGGCGGCGAAA
Product: alanine-glyoxylate aminotransferase
Products: pyruvate; glycine
Alternate protein names: NA
Number of amino acids: Translated: 374; Mature: 373
Protein sequence:
>374_residues MPQSYPAIQAPPRLLFGPGPSMVAPRVYQAMSQPVVGHLDPFFFQVVEEVRGLLGYAYSTKNHFNLATSGTGTSGMECAV ANFTEPGDKFALLTNGFFGDRIGDMARRHGGEVVRLTKPWGEPFDAQEVREFIRRERPRVVAFVQAETSTGMFNQAKPIC DAAREVDAVTIADCVTSLGGMPVLVDENGIDIAYSCSQKGLGCPPGLAPMTVGPRALGRLKERKAPVQSFYLDLQLLDSF YCGKKYHHTASATMFYALREGLAIVAEEGLEARWARHKANHEAFVKGIEAMGLSMLVPEGHRLWTLNTPRIPEGVDDAKV RQFLLEQYNMEIAGGFGPLAGKVFRIGTMGYSSTAENVQLILQALEEALKAAKA
Sequences:
>Translated_374_residues MPQSYPAIQAPPRLLFGPGPSMVAPRVYQAMSQPVVGHLDPFFFQVVEEVRGLLGYAYSTKNHFNLATSGTGTSGMECAV ANFTEPGDKFALLTNGFFGDRIGDMARRHGGEVVRLTKPWGEPFDAQEVREFIRRERPRVVAFVQAETSTGMFNQAKPIC DAAREVDAVTIADCVTSLGGMPVLVDENGIDIAYSCSQKGLGCPPGLAPMTVGPRALGRLKERKAPVQSFYLDLQLLDSF YCGKKYHHTASATMFYALREGLAIVAEEGLEARWARHKANHEAFVKGIEAMGLSMLVPEGHRLWTLNTPRIPEGVDDAKV RQFLLEQYNMEIAGGFGPLAGKVFRIGTMGYSSTAENVQLILQALEEALKAAKA >Mature_373_residues PQSYPAIQAPPRLLFGPGPSMVAPRVYQAMSQPVVGHLDPFFFQVVEEVRGLLGYAYSTKNHFNLATSGTGTSGMECAVA NFTEPGDKFALLTNGFFGDRIGDMARRHGGEVVRLTKPWGEPFDAQEVREFIRRERPRVVAFVQAETSTGMFNQAKPICD AAREVDAVTIADCVTSLGGMPVLVDENGIDIAYSCSQKGLGCPPGLAPMTVGPRALGRLKERKAPVQSFYLDLQLLDSFY CGKKYHHTASATMFYALREGLAIVAEEGLEARWARHKANHEAFVKGIEAMGLSMLVPEGHRLWTLNTPRIPEGVDDAKVR QFLLEQYNMEIAGGFGPLAGKVFRIGTMGYSSTAENVQLILQALEEALKAAKA
Specific function: Could encode ureidoglycolase or L-alanine:glyoxylate aminotransferase, or perhaps both activities [H]
COG id: COG0075
COG function: function code E; Serine-pyruvate aminotransferase/archaeal aspartate aminotransferase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the class-V pyridoxal-phosphate-dependent aminotransferase family [H]
Homologues:
Organism=Homo sapiens, GI4557289, Length=369, Percent_Identity=35.7723577235772, Blast_Score=247, Evalue=1e-65, Organism=Caenorhabditis elegans, GI17536281, Length=364, Percent_Identity=40.1098901098901, Blast_Score=276, Evalue=1e-74, Organism=Saccharomyces cerevisiae, GI6321079, Length=370, Percent_Identity=26.7567567567568, Blast_Score=107, Evalue=4e-24, Organism=Drosophila melanogaster, GI17530823, Length=372, Percent_Identity=39.7849462365591, Blast_Score=280, Evalue=1e-75,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000192 - InterPro: IPR020578 - InterPro: IPR015424 - InterPro: IPR015421 - InterPro: IPR015422 [H]
Pfam domain/function: PF00266 Aminotran_5 [H]
EC number: 2.6.1.44
Molecular weight: Translated: 40833; Mature: 40702
Theoretical pI: Translated: 6.94; Mature: 6.94
Prosite motif: PS00595 AA_TRANSFER_CLASS_5
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 3.5 %Met (Translated Protein) 5.1 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 3.2 %Met (Mature Protein) 4.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPQSYPAIQAPPRLLFGPGPSMVAPRVYQAMSQPVVGHLDPFFFQVVEEVRGLLGYAYST CCCCCCCCCCCCCEEECCCCCHHHHHHHHHHCCCCHHCCCHHHHHHHHHHHHHHHHHCCC KNHFNLATSGTGTSGMECAVANFTEPGDKFALLTNGFFGDRIGDMARRHGGEVVRLTKPW CCCEEEEECCCCCCCCEEEEECCCCCCCCEEEEECCCCHHHHHHHHHHCCCCEEEEECCC GEPFDAQEVREFIRRERPRVVAFVQAETSTGMFNQAKPICDAAREVDAVTIADCVTSLGG CCCCCHHHHHHHHHHCCCCEEEEEEECCCCCCCCCCCHHHHHHHHCCHHHHHHHHHHHCC MPVLVDENGIDIAYSCSQKGLGCPPGLAPMTVGPRALGRLKERKAPVQSFYLDLQLLDSF EEEEECCCCCEEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHH YCGKKYHHTASATMFYALREGLAIVAEEGLEARWARHKANHEAFVKGIEAMGLSMLVPEG HCCCHHCCHHHHHHHHHHHHCHHEEHHCCHHHHHHHHHCCHHHHHHHHHHCCCEEECCCC HRLWTLNTPRIPEGVDDAKVRQFLLEQYNMEIAGGFGPLAGKVFRIGTMGYSSTAENVQL CEEEEECCCCCCCCCCHHHHHHHHHHHHCCEEECCCCCCCCCEEEEECCCCCCHHHHHHH ILQALEEALKAAKA HHHHHHHHHHHHCC >Mature Secondary Structure PQSYPAIQAPPRLLFGPGPSMVAPRVYQAMSQPVVGHLDPFFFQVVEEVRGLLGYAYST CCCCCCCCCCCCEEECCCCCHHHHHHHHHHCCCCHHCCCHHHHHHHHHHHHHHHHHCCC KNHFNLATSGTGTSGMECAVANFTEPGDKFALLTNGFFGDRIGDMARRHGGEVVRLTKPW CCCEEEEECCCCCCCCEEEEECCCCCCCCEEEEECCCCHHHHHHHHHHCCCCEEEEECCC GEPFDAQEVREFIRRERPRVVAFVQAETSTGMFNQAKPICDAAREVDAVTIADCVTSLGG CCCCCHHHHHHHHHHCCCCEEEEEEECCCCCCCCCCCHHHHHHHHCCHHHHHHHHHHHCC MPVLVDENGIDIAYSCSQKGLGCPPGLAPMTVGPRALGRLKERKAPVQSFYLDLQLLDSF EEEEECCCCCEEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHH YCGKKYHHTASATMFYALREGLAIVAEEGLEARWARHKANHEAFVKGIEAMGLSMLVPEG HCCCHHCCHHHHHHHHHHHHCHHEEHHCCHHHHHHHHHCCHHHHHHHHHHCCCEEECCCC HRLWTLNTPRIPEGVDDAKVRQFLLEQYNMEIAGGFGPLAGKVFRIGTMGYSSTAENVQL CEEEEECCCCCCCCCCHHHHHHHHHHHHCCEEECCCCCCCCCEEEEECCCCCCHHHHHHH ILQALEEALKAAKA HHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: L-alanine; glyoxylate
Specific reaction: L-alanine + glyoxylate = pyruvate + glycine
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 9384377; 11344136 [H]