| Definition | Candidatus Solibacter usitatus Ellin6076 chromosome, complete genome. |
|---|---|
| Accession | NC_008536 |
| Length | 9,965,640 |
Click here to switch to the map view.
The map label for this gene is 116621617
Identifier: 116621617
GI number: 116621617
Start: 3172697
End: 3174154
Strand: Reverse
Name: 116621617
Synonym: Acid_2499
Alternate gene names: NA
Gene position: 3174154-3172697 (Counterclockwise)
Preceding gene: 116621621
Following gene: 116621616
Centisome position: 31.85
GC content: 63.58
Gene sequence:
>1458_bases ATGCAATTTGCTTCGTATAAAACCGAAGGCTTCTACGACGAAATGTTCGAAGCGGACGGTCGTGTCCGCCCGCATGTGCA GCTGGTCCTGGACATCATCCAGAACCTGGACCCCGGCCAGCTGCTGCGCTACAAACATGCCGCCGAGCGCTTGCTTTTGC AGCTCGGCATCACCTTCAACGTCTACGGAGATACCGCCGGCACCGAACGCATTTTCCCCTTCGACCTCATTCCGCGCATC ATCACCGCCGCCGAATGGGACCGCGTCGAGCGAGGCCTGAAGCAGCGCATCCACGCCCTCAACGCCTTCATCGACGACAT CTATCATGACCAGAAGATTCTCAAGGACGGCGCCATTCCCGCCGAAGTCGTCACCAGCGCCGTCTCCTATCGCAGGCAGT GCCACGGCCTCAATCCGCCCTTTGGCGTCTGGTGCCACGTCACCGGCACCGACCTGGTCCGCGATTCCGATGGCGAATTC TACGTCCTCGAAGACAACCTGCGCGTCCCCTCCGGCGTCTCCTACGTCCTCGAGAATCGCGAGGTCCTCAAGCGCATCTT CCCCGGCGTCTTTCAGGGACTCTCCGTCCGCCCCGTCAACGAGTACGCCGGCAAGCTGCTCGAGATGCTCGAGTCCCTCG CACCCCGCCCCAGCGGCACGCCCCGCGTCGTCGTCCTCACGCCCGGCATCTACAATTCCGCCTACTTCGAGCACAGCTTT CTCGCGCAGCAGATGGGCGTCCAGCTCGTGGAAGGCAGCGATCTCGTCGTGGATAACAACGACGTCTTCATGCGCACCAC CAAAGGCCTCGAGCGCGTAGACGTCATCTACCGGCGTATCGACGACGATTTCCTCGACCCCGACGCCTTCCGCCCCGATT CTCTCCTCGGCGTCCCCGGCCTCATGGCCGCCTACCGCGCCGGACGCGTCGCCCTCGCCAATGCCCCCGGCAACGGCGTA GCCGATGACAAAGTCATCTACGCCTACGTTCCCGACATGATCCGCTACTACGAAGGCGCGGAGCCCATCCTCCCCAACGT GCCCACCTACCTCTGCTGGCGCGACACCGACCGCGCGTACGTTCTCGAAAATCTCGCCAAGCTCGTCATCAAGGCCGCCA ATGAAAGCGGCGGCTACGGCATGCTCGTCGGCCCCCACTCCACCCTCGCCGACCGCGAGAAATTCGCCGCCCTCATCCAG GCCAACCCGCGCAATTACATCGCGCAGCCCACCCTCGCCCTCTCCCGCGTCCCCACCATAATCGACGAGCACTTCGAGGG ACGCCACGTGGACTTGCGCCCCTACGTCCTCTGCGGCAAGAATATCTACGTCATGCCCGGGGGCCTCACCCGCGTCGCCA TGCGCAAAGGCTCGCTCGTCGTCAACTCTTCCCAGGGCGGCGGCAGCAAGGATACCTGGGTGCTCTCGTCCCCCGAATCC GGAGGTCAGCAGCAATAG
Upstream 100 bases:
>100_bases GATAATGCATATCGCCTGCATAAATAATTTCGCTTTCCCTTCCACCCTCGGGTTGCGTCACGATGGATGCTGGCGATTTT AGAACACAGCGGAGGGGCCT
Downstream 100 bases:
>100_bases CCATGTCAAACACCAAACCGCTTCTCAGCCGGGTTGCCAACGCGGTCTATTGGTTGGGCCGCTACATCGAGCGCGCCGAA AACGTAGCCCGCTTCCTGGA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 485; Mature: 485
Protein sequence:
>485_residues MQFASYKTEGFYDEMFEADGRVRPHVQLVLDIIQNLDPGQLLRYKHAAERLLLQLGITFNVYGDTAGTERIFPFDLIPRI ITAAEWDRVERGLKQRIHALNAFIDDIYHDQKILKDGAIPAEVVTSAVSYRRQCHGLNPPFGVWCHVTGTDLVRDSDGEF YVLEDNLRVPSGVSYVLENREVLKRIFPGVFQGLSVRPVNEYAGKLLEMLESLAPRPSGTPRVVVLTPGIYNSAYFEHSF LAQQMGVQLVEGSDLVVDNNDVFMRTTKGLERVDVIYRRIDDDFLDPDAFRPDSLLGVPGLMAAYRAGRVALANAPGNGV ADDKVIYAYVPDMIRYYEGAEPILPNVPTYLCWRDTDRAYVLENLAKLVIKAANESGGYGMLVGPHSTLADREKFAALIQ ANPRNYIAQPTLALSRVPTIIDEHFEGRHVDLRPYVLCGKNIYVMPGGLTRVAMRKGSLVVNSSQGGGSKDTWVLSSPES GGQQQ
Sequences:
>Translated_485_residues MQFASYKTEGFYDEMFEADGRVRPHVQLVLDIIQNLDPGQLLRYKHAAERLLLQLGITFNVYGDTAGTERIFPFDLIPRI ITAAEWDRVERGLKQRIHALNAFIDDIYHDQKILKDGAIPAEVVTSAVSYRRQCHGLNPPFGVWCHVTGTDLVRDSDGEF YVLEDNLRVPSGVSYVLENREVLKRIFPGVFQGLSVRPVNEYAGKLLEMLESLAPRPSGTPRVVVLTPGIYNSAYFEHSF LAQQMGVQLVEGSDLVVDNNDVFMRTTKGLERVDVIYRRIDDDFLDPDAFRPDSLLGVPGLMAAYRAGRVALANAPGNGV ADDKVIYAYVPDMIRYYEGAEPILPNVPTYLCWRDTDRAYVLENLAKLVIKAANESGGYGMLVGPHSTLADREKFAALIQ ANPRNYIAQPTLALSRVPTIIDEHFEGRHVDLRPYVLCGKNIYVMPGGLTRVAMRKGSLVVNSSQGGGSKDTWVLSSPES GGQQQ >Mature_485_residues MQFASYKTEGFYDEMFEADGRVRPHVQLVLDIIQNLDPGQLLRYKHAAERLLLQLGITFNVYGDTAGTERIFPFDLIPRI ITAAEWDRVERGLKQRIHALNAFIDDIYHDQKILKDGAIPAEVVTSAVSYRRQCHGLNPPFGVWCHVTGTDLVRDSDGEF YVLEDNLRVPSGVSYVLENREVLKRIFPGVFQGLSVRPVNEYAGKLLEMLESLAPRPSGTPRVVVLTPGIYNSAYFEHSF LAQQMGVQLVEGSDLVVDNNDVFMRTTKGLERVDVIYRRIDDDFLDPDAFRPDSLLGVPGLMAAYRAGRVALANAPGNGV ADDKVIYAYVPDMIRYYEGAEPILPNVPTYLCWRDTDRAYVLENLAKLVIKAANESGGYGMLVGPHSTLADREKFAALIQ ANPRNYIAQPTLALSRVPTIIDEHFEGRHVDLRPYVLCGKNIYVMPGGLTRVAMRKGSLVVNSSQGGGSKDTWVLSSPES GGQQQ
Specific function: Unknown
COG id: COG2308
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: To M.tuberculosis RV2411c [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR007297 - InterPro: IPR007302 - InterPro: IPR016450 [H]
Pfam domain/function: PF04169 DUF404; PF04174 DUF407 [H]
EC number: NA
Molecular weight: Translated: 54038; Mature: 54038
Theoretical pI: Translated: 5.66; Mature: 5.66
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQFASYKTEGFYDEMFEADGRVRPHVQLVLDIIQNLDPGQLLRYKHAAERLLLQLGITFN CCCCCCCCCCHHHHHHCCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCEEE VYGDTAGTERIFPFDLIPRIITAAEWDRVERGLKQRIHALNAFIDDIYHDQKILKDGAIP EECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC AEVVTSAVSYRRQCHGLNPPFGVWCHVTGTDLVRDSDGEFYVLEDNLRVPSGVSYVLENR HHHHHHHHHHHHHHCCCCCCCEEEEEEECCCEEECCCCCEEEEECCCCCCCCHHHHHHCH EVLKRIFPGVFQGLSVRPVNEYAGKLLEMLESLAPRPSGTPRVVVLTPGIYNSAYFEHSF HHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCEEEEECCCCCCCHHHHHHH LAQQMGVQLVEGSDLVVDNNDVFMRTTKGLERVDVIYRRIDDDFLDPDAFRPDSLLGVPG HHHHHCCEEECCCEEEEECCCEEEEECCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCH LMAAYRAGRVALANAPGNGVADDKVIYAYVPDMIRYYEGAEPILPNVPTYLCWRDTDRAY HHHHHHCCCEEEECCCCCCCCCCCEEEEEHHHHHHHHCCCCCCCCCCCCEEEEECCCHHH VLENLAKLVIKAANESGGYGMLVGPHSTLADREKFAALIQANPRNYIAQPTLALSRVPTI HHHHHHHHHHHHCCCCCCEEEEECCCHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHCCHH IDEHFEGRHVDLRPYVLCGKNIYVMPGGLTRVAMRKGSLVVNSSQGGGSKDTWVLSSPES HHHCCCCCEECCCEEEEECCEEEEECCCHHEEHEECCCEEEECCCCCCCCCCEEEECCCC GGQQQ CCCCC >Mature Secondary Structure MQFASYKTEGFYDEMFEADGRVRPHVQLVLDIIQNLDPGQLLRYKHAAERLLLQLGITFN CCCCCCCCCCHHHHHHCCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCEEE VYGDTAGTERIFPFDLIPRIITAAEWDRVERGLKQRIHALNAFIDDIYHDQKILKDGAIP EECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC AEVVTSAVSYRRQCHGLNPPFGVWCHVTGTDLVRDSDGEFYVLEDNLRVPSGVSYVLENR HHHHHHHHHHHHHHCCCCCCCEEEEEEECCCEEECCCCCEEEEECCCCCCCCHHHHHHCH EVLKRIFPGVFQGLSVRPVNEYAGKLLEMLESLAPRPSGTPRVVVLTPGIYNSAYFEHSF HHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCEEEEECCCCCCCHHHHHHH LAQQMGVQLVEGSDLVVDNNDVFMRTTKGLERVDVIYRRIDDDFLDPDAFRPDSLLGVPG HHHHHCCEEECCCEEEEECCCEEEEECCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCH LMAAYRAGRVALANAPGNGVADDKVIYAYVPDMIRYYEGAEPILPNVPTYLCWRDTDRAY HHHHHHCCCEEEECCCCCCCCCCCEEEEEHHHHHHHHCCCCCCCCCCCCEEEEECCCHHH VLENLAKLVIKAANESGGYGMLVGPHSTLADREKFAALIQANPRNYIAQPTLALSRVPTI HHHHHHHHHHHHCCCCCCEEEEECCCHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHCCHH IDEHFEGRHVDLRPYVLCGKNIYVMPGGLTRVAMRKGSLVVNSSQGGGSKDTWVLSSPES HHHCCCCCEECCCEEEEECCEEEEECCCHHEEHEECCCEEEECCCCCCCCCCEEEECCCC GGQQQ CCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 1368738; 8590279; 8905231 [H]