| Definition | Candidatus Solibacter usitatus Ellin6076 chromosome, complete genome. |
|---|---|
| Accession | NC_008536 |
| Length | 9,965,640 |
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The map label for this gene is macB [H]
Identifier: 116621607
GI number: 116621607
Start: 3155884
End: 3158298
Strand: Direct
Name: macB [H]
Synonym: Acid_2489
Alternate gene names: 116621607
Gene position: 3155884-3158298 (Clockwise)
Preceding gene: 116621605
Following gene: 116621609
Centisome position: 31.67
GC content: 67.33
Gene sequence:
>2415_bases ATGAACGACATTCGGTATGCACTTCGGGGGTTTGCGCGGAATCCCGGATTTGTGGCGGCGGCGGTGTTGTCGCTGGGGAT CGGGATCGGCGCCAACACCGCCATTTTCAGTGTGGCGGATGCGCTGCTACTGCGGCCGCTGCCTTACCGGGACGCGGACA GGCTCGCGATTTTGTGGAACCGGTCGCCGGGGTTGAACATCGCACAGGACTGGTTTTCGACGGCGCAATATCTCGACATT CGCAACGGCCATCACGGGTTCGAAGAACTGGCGCTCGCGCTCGGCGGGAATGCGAACCTGACCGGCACAGGAGAGCCGGA GCGGGTGGGTGTGGTGCGGGTATCTTCAGGATTGCTGCCGATGCTGGGCGCGCGGACGGCGATGGGGCGATTGTTCGAGG CGCGCGAGGATACGGAACTGCCGGCGGCCACCGCGATCCTCAGTTATGGAACGTGGATGCGGCGGTACGGCGGCGACGCA CGGGTGCTTGACCGGGCGATCACGCTGGATGGGCGGAGGTACCGTGTGGTGGGAGTGATGGCGCGGGGCTTCGCTTTGCC GCACGAAGTGCTGCCGACGCTGGGCGGTCCGGAAGAGCCGGATATCCTCCTGCCGCTGCCGCTGGCGGCCTCGGCTGTGC AGGCGCGCAATCGCGAGGACTACAACGTGATCGGGCGGTTGAAGCGTGGGGTGACGCTGCAGGGGGCGCAGGCGGAGATG GACGCGATTACGGCGCGGCTGCGGGCGGCTCACGCCGATTTGTATCCGCCCAACGGAGGGCTGACGTTCGGGATCGTGCC GCTGAAGGAGCAGGTGGTGGGGGATTCGCGGAGGACGGTCCTGATCCTGATGGGTGCGGTGGTGTTCGTGCTGACGATTG CATGCGCGAATGTGGCGAACCTGATGCTCTCGCGCGGAATGGCGCGGAGCCGCGAGATGGCGGTGCGCGCGGCGCTGGGC GCGGGGCGCGCGCGGATCGTGCGGCAACTGTTGACGGAGAGCGTAGTGCTTGGGATCGCGGGCGGTACGCTTGGGGTCGC GCTGGCGGCGTGGAGCGTGCAGTGGATCCGGGTGCTGGGCCCGAAGAGCGTGCCGCGCGTGGGCGAGATCGCAATCAACG GGACGGTGCTCGGCTTCACGCTCGGTGTCAGCGTGCTATCGGGCGTGCTGTTCGGTCTAGCTCCGGCGCTGCGGGTGTCG CGCGCCGATTTGCATGCGGGGATGAGTAGGGCGGGACGCGGGGATCGATTGCGGCGACTGCTCGTGGTGAGCGAACTGGC GCTCTCGGTGGTCCTGCTGATCGGGTCGGGGCTGCTGCTGCGCAGCTTCGCGCGGCTGCTCGAGGTGGCGCCGGGTTTCG ACGCGAAGAACGTGTTGACGCTGGGGCTGACGATGACCGGCGCGAAGTACGGCAACAGCACGATGGTGCTCGCGACATAC CGCGAGTTGTGGCAGCGGCTGGCTCGGCTGCCGGGGATCGCGGCGGCCGGCGGGGTCTCGGCGCTGCCGTTGAGCGAGGT GTACGCGTGGGGTCCGATCATCGTGGAAGGGCGGACGCCGCCGCGGGGCGAGAGCTTTCTGAATGCCGATGAACGGATCG CGGCGGGAGATTATTTTCTGGCGATGCAGATTCCGCTTCGGCGCGGGAGGTATTTCAACGAGCAGGACACGGCGGACAAG CCGCGGGTGGCGATTGTGGACGAGTATATGGCGCAGCAATTGTGGCCGGGGCAGGACGCGATCGGGAAGCGGTTCCGTCC GGGCGGAGTGGACAATGCGCAGCGGTGGATCACGGTGGTGGGAGTGGTGGGGCGGGTGAAGCAGTACACGCTCGACGCGG ATTCGCGGATCGCGCTATACCTTGCGCACACGCAATCGCCGCGCCGCGAGATGAGCGTGGTGGTGCGGGGCGTGGGACCG GCGGCCCCAGCGGTGCGGCGGGAGATCCGCGCGGTGGATGCGGATTTGCCCGTCTACCAGGTACGGACGATGGAGGCGCA GGTAGCTGAATCGCTGGCGCGGCGCAAGTTTACGCTGACGATGCTGGGGCTGTTCGCGGCGCTGGCGTTGGGATTGGCGG GGATCGGAATATACGGCGTGATGGCGTTTCTGGTGACGCAGGGGACGCGGGAGATCGGGATCCGGATGGCGTTGGGGGCG AGCAGCGGCGGAATTTTGGGGTGGGTGTTGAAGCGAGCGGTGGGAATGGCGGCGGTGGGGATCGCGATCGGGCTGGCGGC GGCGATCCCGTTGGCGCGATTGCTGCGGAGCTTGCTGTTTGGAGTGCGGGAGAGCGATGCATTGACGTTCGCGGCGGCGT CGGTGGTGCTGGGTGCGATCGCTCTGGCGGCGAGTTATGTGCCGGCGAGAAGGGCGTCGCGGATTGATCCGATGGTGTCG TTGCGAGCGGAGTGA
Upstream 100 bases:
>100_bases GCGTTCCACGGGGAACATGTAGGGGTAGAGGTCGCGCCAGAGGTCTTCGTTTTCGAACCAGGACATACTTCAGGCTAACA GTGTCAGAATCGATTTACGC
Downstream 100 bases:
>100_bases GCTCCAAGAGATCGCTCCCTGACGGTCGCGGTTCGCGGGACGGAGTCCGTGTGCGTAGACGCCGGCCCCACAAAAAACAG ACTAAAGGGACAGGCCGGGA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 804; Mature: 804
Protein sequence:
>804_residues MNDIRYALRGFARNPGFVAAAVLSLGIGIGANTAIFSVADALLLRPLPYRDADRLAILWNRSPGLNIAQDWFSTAQYLDI RNGHHGFEELALALGGNANLTGTGEPERVGVVRVSSGLLPMLGARTAMGRLFEAREDTELPAATAILSYGTWMRRYGGDA RVLDRAITLDGRRYRVVGVMARGFALPHEVLPTLGGPEEPDILLPLPLAASAVQARNREDYNVIGRLKRGVTLQGAQAEM DAITARLRAAHADLYPPNGGLTFGIVPLKEQVVGDSRRTVLILMGAVVFVLTIACANVANLMLSRGMARSREMAVRAALG AGRARIVRQLLTESVVLGIAGGTLGVALAAWSVQWIRVLGPKSVPRVGEIAINGTVLGFTLGVSVLSGVLFGLAPALRVS RADLHAGMSRAGRGDRLRRLLVVSELALSVVLLIGSGLLLRSFARLLEVAPGFDAKNVLTLGLTMTGAKYGNSTMVLATY RELWQRLARLPGIAAAGGVSALPLSEVYAWGPIIVEGRTPPRGESFLNADERIAAGDYFLAMQIPLRRGRYFNEQDTADK PRVAIVDEYMAQQLWPGQDAIGKRFRPGGVDNAQRWITVVGVVGRVKQYTLDADSRIALYLAHTQSPRREMSVVVRGVGP AAPAVRREIRAVDADLPVYQVRTMEAQVAESLARRKFTLTMLGLFAALALGLAGIGIYGVMAFLVTQGTREIGIRMALGA SSGGILGWVLKRAVGMAAVGIAIGLAAAIPLARLLRSLLFGVRESDALTFAAASVVLGAIALAASYVPARRASRIDPMVS LRAE
Sequences:
>Translated_804_residues MNDIRYALRGFARNPGFVAAAVLSLGIGIGANTAIFSVADALLLRPLPYRDADRLAILWNRSPGLNIAQDWFSTAQYLDI RNGHHGFEELALALGGNANLTGTGEPERVGVVRVSSGLLPMLGARTAMGRLFEAREDTELPAATAILSYGTWMRRYGGDA RVLDRAITLDGRRYRVVGVMARGFALPHEVLPTLGGPEEPDILLPLPLAASAVQARNREDYNVIGRLKRGVTLQGAQAEM DAITARLRAAHADLYPPNGGLTFGIVPLKEQVVGDSRRTVLILMGAVVFVLTIACANVANLMLSRGMARSREMAVRAALG AGRARIVRQLLTESVVLGIAGGTLGVALAAWSVQWIRVLGPKSVPRVGEIAINGTVLGFTLGVSVLSGVLFGLAPALRVS RADLHAGMSRAGRGDRLRRLLVVSELALSVVLLIGSGLLLRSFARLLEVAPGFDAKNVLTLGLTMTGAKYGNSTMVLATY RELWQRLARLPGIAAAGGVSALPLSEVYAWGPIIVEGRTPPRGESFLNADERIAAGDYFLAMQIPLRRGRYFNEQDTADK PRVAIVDEYMAQQLWPGQDAIGKRFRPGGVDNAQRWITVVGVVGRVKQYTLDADSRIALYLAHTQSPRREMSVVVRGVGP AAPAVRREIRAVDADLPVYQVRTMEAQVAESLARRKFTLTMLGLFAALALGLAGIGIYGVMAFLVTQGTREIGIRMALGA SSGGILGWVLKRAVGMAAVGIAIGLAAAIPLARLLRSLLFGVRESDALTFAAASVVLGAIALAASYVPARRASRIDPMVS LRAE >Mature_804_residues MNDIRYALRGFARNPGFVAAAVLSLGIGIGANTAIFSVADALLLRPLPYRDADRLAILWNRSPGLNIAQDWFSTAQYLDI RNGHHGFEELALALGGNANLTGTGEPERVGVVRVSSGLLPMLGARTAMGRLFEAREDTELPAATAILSYGTWMRRYGGDA RVLDRAITLDGRRYRVVGVMARGFALPHEVLPTLGGPEEPDILLPLPLAASAVQARNREDYNVIGRLKRGVTLQGAQAEM DAITARLRAAHADLYPPNGGLTFGIVPLKEQVVGDSRRTVLILMGAVVFVLTIACANVANLMLSRGMARSREMAVRAALG AGRARIVRQLLTESVVLGIAGGTLGVALAAWSVQWIRVLGPKSVPRVGEIAINGTVLGFTLGVSVLSGVLFGLAPALRVS RADLHAGMSRAGRGDRLRRLLVVSELALSVVLLIGSGLLLRSFARLLEVAPGFDAKNVLTLGLTMTGAKYGNSTMVLATY RELWQRLARLPGIAAAGGVSALPLSEVYAWGPIIVEGRTPPRGESFLNADERIAAGDYFLAMQIPLRRGRYFNEQDTADK PRVAIVDEYMAQQLWPGQDAIGKRFRPGGVDNAQRWITVVGVVGRVKQYTLDADSRIALYLAHTQSPRREMSVVVRGVGP AAPAVRREIRAVDADLPVYQVRTMEAQVAESLARRKFTLTMLGLFAALALGLAGIGIYGVMAFLVTQGTREIGIRMALGA SSGGILGWVLKRAVGMAAVGIAIGLAAAIPLARLLRSLLFGVRESDALTFAAASVVLGAIALAASYVPARRASRIDPMVS LRAE
Specific function: Part of the ABC transporter complex MacAB involved in macrolide export. Transmembrane domains (TMD) form a pore in the membrane and the ATP-binding domain (NBD) is responsible for energy generation [H]
COG id: COG0577
COG function: function code V; ABC-type antimicrobial peptide transport system, permease component
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 ABC transporter domain [H]
Homologues:
Organism=Escherichia coli, GI1787105, Length=289, Percent_Identity=25.9515570934256, Blast_Score=75, Evalue=1e-14,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003439 - InterPro: IPR017871 - InterPro: IPR017911 - InterPro: IPR003593 - InterPro: IPR003838 [H]
Pfam domain/function: PF00005 ABC_tran; PF02687 FtsX [H]
EC number: NA
Molecular weight: Translated: 85733; Mature: 85733
Theoretical pI: Translated: 11.03; Mature: 11.03
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.1 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 0.1 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNDIRYALRGFARNPGFVAAAVLSLGIGIGANTAIFSVADALLLRPLPYRDADRLAILWN CCHHHHHHHHHCCCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCCCCCCCEEEEEE RSPGLNIAQDWFSTAQYLDIRNGHHGFEELALALGGNANLTGTGEPERVGVVRVSSGLLP CCCCCCHHHHHHHHHHHHCCCCCCCCHHHHHHHHCCCCCCCCCCCCCEEEEEEECCCCHH MLGARTAMGRLFEAREDTELPAATAILSYGTWMRRYGGDARVLDRAITLDGRRYRVVGVM HHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHEECCCCEEEEEEEH ARGFALPHEVLPTLGGPEEPDILLPLPLAASAVQARNREDYNVIGRLKRGVTLQGAQAEM HHCCCCCHHHHHCCCCCCCCCEEEECCHHHHHHHHCCCCCHHHHHHHHCCCEECCCHHHH DAITARLRAAHADLYPPNGGLTFGIVPLKEQVVGDSRRTVLILMGAVVFVLTIACANVAN HHHHHHHHHHHCCCCCCCCCEEEEEEECHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHH LMLSRGMARSREMAVRAALGAGRARIVRQLLTESVVLGIAGGTLGVALAAWSVQWIRVLG HHHHHCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHEEECCHHHHHHHHHHHHHHHHHCC PKSVPRVGEIAINGTVLGFTLGVSVLSGVLFGLAPALRVSRADLHAGMSRAGRGDRLRRL CCCCCCCCEEEECCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHH LVVSELALSVVLLIGSGLLLRSFARLLEVAPGFDAKNVLTLGLTMTGAKYGNSTMVLATY HHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCCCEEEEEEEEECCCCCCCEEEHHHH RELWQRLARLPGIAAAGGVSALPLSEVYAWGPIIVEGRTPPRGESFLNADERIAAGDYFL HHHHHHHHHCCCCCCCCCCCCCCHHHHHCCCCEEEECCCCCCCCHHCCCCCCEECCCEEE AMQIPLRRGRYFNEQDTADKPRVAIVDEYMAQQLWPGQDAIGKRFRPGGVDNAQRWITVV EEECCHHCCCCCCCCCCCCCCCEEHHHHHHHHHCCCCCHHHCCCCCCCCCCCHHHHHHHH GVVGRVKQYTLDADSRIALYLAHTQSPRREMSVVVRGVGPAAPAVRREIRAVDADLPVYQ HHHHHHHHEEECCCCEEEEEEEECCCCHHHHHHHEECCCCCCHHHHHHHHHHCCCCCHHH VRTMEAQVAESLARRKFTLTMLGLFAALALGLAGIGIYGVMAFLVTQGTREIGIRMALGA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHCEEEEECC SSGGILGWVLKRAVGMAAVGIAIGLAAAIPLARLLRSLLFGVRESDALTFAAASVVLGAI CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHH ALAASYVPARRASRIDPMVSLRAE HHHHHHCCHHHHHCCCCCCEECCC >Mature Secondary Structure MNDIRYALRGFARNPGFVAAAVLSLGIGIGANTAIFSVADALLLRPLPYRDADRLAILWN CCHHHHHHHHHCCCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCCCCCCCEEEEEE RSPGLNIAQDWFSTAQYLDIRNGHHGFEELALALGGNANLTGTGEPERVGVVRVSSGLLP CCCCCCHHHHHHHHHHHHCCCCCCCCHHHHHHHHCCCCCCCCCCCCCEEEEEEECCCCHH MLGARTAMGRLFEAREDTELPAATAILSYGTWMRRYGGDARVLDRAITLDGRRYRVVGVM HHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHEECCCCEEEEEEEH ARGFALPHEVLPTLGGPEEPDILLPLPLAASAVQARNREDYNVIGRLKRGVTLQGAQAEM HHCCCCCHHHHHCCCCCCCCCEEEECCHHHHHHHHCCCCCHHHHHHHHCCCEECCCHHHH DAITARLRAAHADLYPPNGGLTFGIVPLKEQVVGDSRRTVLILMGAVVFVLTIACANVAN HHHHHHHHHHHCCCCCCCCCEEEEEEECHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHH LMLSRGMARSREMAVRAALGAGRARIVRQLLTESVVLGIAGGTLGVALAAWSVQWIRVLG HHHHHCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHEEECCHHHHHHHHHHHHHHHHHCC PKSVPRVGEIAINGTVLGFTLGVSVLSGVLFGLAPALRVSRADLHAGMSRAGRGDRLRRL CCCCCCCCEEEECCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHH LVVSELALSVVLLIGSGLLLRSFARLLEVAPGFDAKNVLTLGLTMTGAKYGNSTMVLATY HHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCCCEEEEEEEEECCCCCCCEEEHHHH RELWQRLARLPGIAAAGGVSALPLSEVYAWGPIIVEGRTPPRGESFLNADERIAAGDYFL HHHHHHHHHCCCCCCCCCCCCCCHHHHHCCCCEEEECCCCCCCCHHCCCCCCEECCCEEE AMQIPLRRGRYFNEQDTADKPRVAIVDEYMAQQLWPGQDAIGKRFRPGGVDNAQRWITVV EEECCHHCCCCCCCCCCCCCCCEEHHHHHHHHHCCCCCHHHCCCCCCCCCCCHHHHHHHH GVVGRVKQYTLDADSRIALYLAHTQSPRREMSVVVRGVGPAAPAVRREIRAVDADLPVYQ HHHHHHHHEEECCCCEEEEEEEECCCCHHHHHHHEECCCCCCHHHHHHHHHHCCCCCHHH VRTMEAQVAESLARRKFTLTMLGLFAALALGLAGIGIYGVMAFLVTQGTREIGIRMALGA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHCEEEEECC SSGGILGWVLKRAVGMAAVGIAIGLAAAIPLARLLRSLLFGVRESDALTFAAASVVLGAI CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHH ALAASYVPARRASRIDPMVSLRAE HHHHHHCCHHHHHCCCCCCEECCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: NA