| Definition | Candidatus Solibacter usitatus Ellin6076 chromosome, complete genome. |
|---|---|
| Accession | NC_008536 |
| Length | 9,965,640 |
Click here to switch to the map view.
The map label for this gene is 116621602
Identifier: 116621602
GI number: 116621602
Start: 3153144
End: 3153776
Strand: Reverse
Name: 116621602
Synonym: Acid_2484
Alternate gene names: NA
Gene position: 3153776-3153144 (Counterclockwise)
Preceding gene: 116621604
Following gene: 116621601
Centisome position: 31.65
GC content: 69.35
Gene sequence:
>633_bases TTGTCCCACTACGACCTCGCGGACGATGTCCGCGAAGCCCTCGACCTCGGTCGCGTCCTAGGTCAACGACGCGCCCTCGC CGCCGTCGGCGGACGCTGCTCCGCCGCCCACGCCCAACTCCTCCGCCGCATCCGCGACGAAAAACTTTATCGCCCGGTCG CCCCCTCCTGGCGCGCCTTCTGTGCCGCCTACCTCGCCCGCAGCCGCCGCCACGCCGATCGCCTGATCGCCCTCCTCAAT CGCTTCGGGCCCGTCTTCTTCGAGCTCTCCGAGCTCACCGGTATCTCTGCCGTCCAATATCCGGCCGTCCAACCCGCCAT CCAGGAGGACAGCCTCCTCATCGACGGCCAGGCCATCAGCCTCATCCCGGATAACGCCCCGAAGCTCATCGAAGCCGTCG ATCGCCTGCTCGCCCGCGCGCCTTCCCGTCCTGCGCGCAATCCACAATCCACGGGTGCCCGCCTCGCCGATCTCGCCGCC CGCGGCCGCGTCATCGCCAGCCAGCTCGTCGCTCTCTACGAGTCCACCTGCTCCGCCGGCGATCGCGAAGCCATCCTCGA AGTCGCCACCGAGCTCCGCCTCATCCTTCTCCAACCCGGTACCCAGTCCCCCGACCGCCGGAGGGGGGCTTGA
Upstream 100 bases:
>100_bases CCTGAAACGCGCAAGCGGGCCGCCGTGGCCCGCTTTTGTCGTTCTTGGCCCGATCAACTTCTTTCTTATGAATAACTGCT GTCAGGAAACCGGGACAAGC
Downstream 100 bases:
>100_bases CAAGAGCATGAGCAACGGTAGAATAAACTTCATCTAAGCGCTGTTATGCAACCCGCTTGTGAGCACGCCCGCACCCAGAT GATCGCCCGAAGAGACGGCG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 210; Mature: 209
Protein sequence:
>210_residues MSHYDLADDVREALDLGRVLGQRRALAAVGGRCSAAHAQLLRRIRDEKLYRPVAPSWRAFCAAYLARSRRHADRLIALLN RFGPVFFELSELTGISAVQYPAVQPAIQEDSLLIDGQAISLIPDNAPKLIEAVDRLLARAPSRPARNPQSTGARLADLAA RGRVIASQLVALYESTCSAGDREAILEVATELRLILLQPGTQSPDRRRGA
Sequences:
>Translated_210_residues MSHYDLADDVREALDLGRVLGQRRALAAVGGRCSAAHAQLLRRIRDEKLYRPVAPSWRAFCAAYLARSRRHADRLIALLN RFGPVFFELSELTGISAVQYPAVQPAIQEDSLLIDGQAISLIPDNAPKLIEAVDRLLARAPSRPARNPQSTGARLADLAA RGRVIASQLVALYESTCSAGDREAILEVATELRLILLQPGTQSPDRRRGA >Mature_209_residues SHYDLADDVREALDLGRVLGQRRALAAVGGRCSAAHAQLLRRIRDEKLYRPVAPSWRAFCAAYLARSRRHADRLIALLNR FGPVFFELSELTGISAVQYPAVQPAIQEDSLLIDGQAISLIPDNAPKLIEAVDRLLARAPSRPARNPQSTGARLADLAAR GRVIASQLVALYESTCSAGDREAILEVATELRLILLQPGTQSPDRRRGA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 22954; Mature: 22822
Theoretical pI: Translated: 9.88; Mature: 9.88
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 0.5 %Met (Translated Protein) 1.9 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 0.0 %Met (Mature Protein) 1.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSHYDLADDVREALDLGRVLGQRRALAAVGGRCSAAHAQLLRRIRDEKLYRPVAPSWRAF CCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCCHHHHH CAAYLARSRRHADRLIALLNRFGPVFFELSELTGISAVQYPAVQPAIQEDSLLIDGQAIS HHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHCCCCHHHCCCCCCCCCCCCEEECCCEEE LIPDNAPKLIEAVDRLLARAPSRPARNPQSTGARLADLAARGRVIASQLVALYESTCSAG ECCCCCHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC DREAILEVATELRLILLQPGTQSPDRRRGA CHHHHHHHHHHHHEEEECCCCCCCCCCCCC >Mature Secondary Structure SHYDLADDVREALDLGRVLGQRRALAAVGGRCSAAHAQLLRRIRDEKLYRPVAPSWRAF CCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCCHHHHH CAAYLARSRRHADRLIALLNRFGPVFFELSELTGISAVQYPAVQPAIQEDSLLIDGQAIS HHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHCCCCHHHCCCCCCCCCCCCEEECCCEEE LIPDNAPKLIEAVDRLLARAPSRPARNPQSTGARLADLAARGRVIASQLVALYESTCSAG ECCCCCHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC DREAILEVATELRLILLQPGTQSPDRRRGA CHHHHHHHHHHHHEEEECCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA