| Definition | Candidatus Solibacter usitatus Ellin6076 chromosome, complete genome. |
|---|---|
| Accession | NC_008536 |
| Length | 9,965,640 |
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The map label for this gene is 116621586
Identifier: 116621586
GI number: 116621586
Start: 3137047
End: 3138159
Strand: Reverse
Name: 116621586
Synonym: Acid_2468
Alternate gene names: NA
Gene position: 3138159-3137047 (Counterclockwise)
Preceding gene: 116621587
Following gene: 116621585
Centisome position: 31.49
GC content: 60.65
Gene sequence:
>1113_bases ATGATCGATTGTCCTGAGTCAACGACCGTCCAGACGATTGTCATCGGAGGGGGACAGGCGGGGCTTTCGGTTGGATTTCA CCTGGCGAAACTGGGCCTGCCCTTCCAGATCCTGGACGCGAACGAGCGGGTGGGCGATGCATGGCGGAAGCGTTGGGACT CGCTTCGCGTTTTCCATCCGGCCCGGTATGTGGGACTTCCCGGGATGCGATTTCCGGGCAGGGGCGACGCTTTTCCCACG AAGGATCAGATGGCCGACTATCTTGTCGAGTACGCGCGGCGCTTCCGCTTGCCCGTCCGAAACGGCATCAAAGTGAACCG CCTTTGGAAAGAAGCCGACCAATTTGTGATCGCCGCGGGGGATCAGGTGATTCGGTCCGAGAACGTCGTAGTGGCGATGG CGAACTACCAGCAACCGAGGGTGCCTGCTTTCGCCGCGGAACTCGACCCTGCCATTGTCCAACTGCACTCTCATGAGTAC CGAAACCTCTCACAGCTGCGGGAGGGTGGTGTGCTTGTGGTGGGAGCGGGCAACTCCGGCGCGGAGATCGCGATCGAAGC CGCGCGCTCGCATCCGACCTGGATTTCCGGACAGGAGTCGGGTCATATTCCCTGGCAGAACGATGGGTTTATCGGAAGGT TTTTCCTGGTGCGCCTGCTGCGTTTCTTCTACCACCATATTCTCACCGTGAAAACGCCGTTGGGCCGGAAGCTTCGCCCC AAGCTGATAGCGGCCACGGCTCCACTTATCCGGGTAAAGCCCGAGGGACTGACCGGCTGCGGAGTTACCAGGGTGCCCAG GATGGCCGGTGTAAGGACCGGGCTGCCCCTCCTGGCAGACGGTTCCACGCTCGATGTGAAGAATGTGATCTGGTGCACGG GCTACCATCGCGGTTTTGGGTGGATCGAGCTTCCCATCTTTCAGGAGAACGGCGAGCCGGAACATGAAGAAGGGACGGTA AGGAGCGTTCCGGGAATGTACTTCGTCGGCTTGCACTTTCTCTATTCGATGACGTCGGCATCCTTGGTCGGCGTGGGGCG GGACGCAGAGCGAGTGGCCAAGGCCATCGCCTCGAGAGCGCGGATCTTGAAGCCCGGGCTGACTCAAAGGTGA
Upstream 100 bases:
>100_bases CGGGCGGCGAAGTGATGCAGGGGTCCGCTCGCCCGCGCAATCGCCATGCTGGCCTGAGGTATCTTGATGATCGACAGAGA ACTTTCCAGAGGTTGATGAA
Downstream 100 bases:
>100_bases CGAAGACGGTACTCGCGCGGCTGCAAAGTGTCTATTCACTCAAGGCCCTGGATCCGTCGCCTACTCCGATGACCAGGCTC GAAGCCTTTGGCGCGGACAA
Product: Trk family potassium transport protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 370; Mature: 370
Protein sequence:
>370_residues MIDCPESTTVQTIVIGGGQAGLSVGFHLAKLGLPFQILDANERVGDAWRKRWDSLRVFHPARYVGLPGMRFPGRGDAFPT KDQMADYLVEYARRFRLPVRNGIKVNRLWKEADQFVIAAGDQVIRSENVVVAMANYQQPRVPAFAAELDPAIVQLHSHEY RNLSQLREGGVLVVGAGNSGAEIAIEAARSHPTWISGQESGHIPWQNDGFIGRFFLVRLLRFFYHHILTVKTPLGRKLRP KLIAATAPLIRVKPEGLTGCGVTRVPRMAGVRTGLPLLADGSTLDVKNVIWCTGYHRGFGWIELPIFQENGEPEHEEGTV RSVPGMYFVGLHFLYSMTSASLVGVGRDAERVAKAIASRARILKPGLTQR
Sequences:
>Translated_370_residues MIDCPESTTVQTIVIGGGQAGLSVGFHLAKLGLPFQILDANERVGDAWRKRWDSLRVFHPARYVGLPGMRFPGRGDAFPT KDQMADYLVEYARRFRLPVRNGIKVNRLWKEADQFVIAAGDQVIRSENVVVAMANYQQPRVPAFAAELDPAIVQLHSHEY RNLSQLREGGVLVVGAGNSGAEIAIEAARSHPTWISGQESGHIPWQNDGFIGRFFLVRLLRFFYHHILTVKTPLGRKLRP KLIAATAPLIRVKPEGLTGCGVTRVPRMAGVRTGLPLLADGSTLDVKNVIWCTGYHRGFGWIELPIFQENGEPEHEEGTV RSVPGMYFVGLHFLYSMTSASLVGVGRDAERVAKAIASRARILKPGLTQR >Mature_370_residues MIDCPESTTVQTIVIGGGQAGLSVGFHLAKLGLPFQILDANERVGDAWRKRWDSLRVFHPARYVGLPGMRFPGRGDAFPT KDQMADYLVEYARRFRLPVRNGIKVNRLWKEADQFVIAAGDQVIRSENVVVAMANYQQPRVPAFAAELDPAIVQLHSHEY RNLSQLREGGVLVVGAGNSGAEIAIEAARSHPTWISGQESGHIPWQNDGFIGRFFLVRLLRFFYHHILTVKTPLGRKLRP KLIAATAPLIRVKPEGLTGCGVTRVPRMAGVRTGLPLLADGSTLDVKNVIWCTGYHRGFGWIELPIFQENGEPEHEEGTV RSVPGMYFVGLHFLYSMTSASLVGVGRDAERVAKAIASRARILKPGLTQR
Specific function: Unknown
COG id: COG2072
COG function: function code P; Predicted flavoprotein involved in K+ transport
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR013027 - InterPro: IPR000103 [H]
Pfam domain/function: PF07992 Pyr_redox_2 [H]
EC number: NA
Molecular weight: Translated: 40934; Mature: 40934
Theoretical pI: Translated: 10.25; Mature: 10.25
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIDCPESTTVQTIVIGGGQAGLSVGFHLAKLGLPFQILDANERVGDAWRKRWDSLRVFHP CCCCCCCCCEEEEEEECCCCHHHHHHHHHHHCCCEEEECCCCHHHHHHHHHHHCEEEECC ARYVGLPGMRFPGRGDAFPTKDQMADYLVEYARRFRLPVRNGIKVNRLWKEADQFVIAAG HHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHCCEEEECC DQVIRSENVVVAMANYQQPRVPAFAAELDPAIVQLHSHEYRNLSQLREGGVLVVGAGNSG CHHEECCCEEEEEECCCCCCCCHHHHHCCHHHEEECCHHHHHHHHHHCCCEEEEECCCCC AEIAIEAARSHPTWISGQESGHIPWQNDGFIGRFFLVRLLRFFYHHILTVKTPLGRKLRP CEEEEEECCCCCCEECCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHEEECCCCCCCCCC KLIAATAPLIRVKPEGLTGCGVTRVPRMAGVRTGLPLLADGSTLDVKNVIWCTGYHRGFG HHEEECCCEEEECCCCCCCCCCHHCCHHHHHHCCCCEEECCCEECCCCEEEECCCCCCCC WIELPIFQENGEPEHEEGTVRSVPGMYFVGLHFLYSMTSASLVGVGRDAERVAKAIASRA EEEEEEEECCCCCCCCCCCEECCCCHHHHHHHHHHHHHHHHEEECCCCHHHHHHHHHHHH RILKPGLTQR HHCCCCCCCC >Mature Secondary Structure MIDCPESTTVQTIVIGGGQAGLSVGFHLAKLGLPFQILDANERVGDAWRKRWDSLRVFHP CCCCCCCCCEEEEEEECCCCHHHHHHHHHHHCCCEEEECCCCHHHHHHHHHHHCEEEECC ARYVGLPGMRFPGRGDAFPTKDQMADYLVEYARRFRLPVRNGIKVNRLWKEADQFVIAAG HHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHCCEEEECC DQVIRSENVVVAMANYQQPRVPAFAAELDPAIVQLHSHEYRNLSQLREGGVLVVGAGNSG CHHEECCCEEEEEECCCCCCCCHHHHHCCHHHEEECCHHHHHHHHHHCCCEEEEECCCCC AEIAIEAARSHPTWISGQESGHIPWQNDGFIGRFFLVRLLRFFYHHILTVKTPLGRKLRP CEEEEEECCCCCCEECCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHEEECCCCCCCCCC KLIAATAPLIRVKPEGLTGCGVTRVPRMAGVRTGLPLLADGSTLDVKNVIWCTGYHRGFG HHEEECCCEEEECCCCCCCCCCHHCCHHHHHHCCCCEEECCCEECCCCEEEECCCCCCCC WIELPIFQENGEPEHEEGTVRSVPGMYFVGLHFLYSMTSASLVGVGRDAERVAKAIASRA EEEEEEEECCCCCCCCCCCEECCCCHHHHHHHHHHHHHHHHEEECCCCHHHHHHHHHHHH RILKPGLTQR HHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA