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The map label for this gene is yliI [H]

Identifier: 116621581

GI number: 116621581

Start: 3128714

End: 3130528

Strand: Reverse

Name: yliI [H]

Synonym: Acid_2463

Alternate gene names: 116621581

Gene position: 3130528-3128714 (Counterclockwise)

Preceding gene: 116621583

Following gene: 116621579

Centisome position: 31.41

GC content: 62.42

Gene sequence:

>1815_bases
ATGCAACGTTGTGCAGCTGCCTTGTTGGCATGTGTAATGAGCGCGGGCGCACAGGAGATTCGCACCACCCAGATTGCGTC
GGGGATCGCGGCGCCGACCGACATTCAGGATCCAAAAGACGGGTCAGGCCGGTTGTTCTTCGTGCAGCAGAATGGTGTTG
TGCGAATTTTTCGGGGCGGGGCGGTGAGTTCGCGACCGTTTCTGGATATCAGCGGCAAGACGCGGGCGGACGGCGAGCGT
GGATTGTTGGGCCTCGCGTTTCCTCCCGGATTCGCCCAGAAGCAGCGCTTCTACGTGGACTATACGGATCTGAACGGCGA
CACGACGATCGCGCGGTACCAGGTCTCGACGGATCGCGAAGCGGCGGATGGCGCAAGCGAAGTTGTGCTGCTGAAGATCG
CACAGCCGTTCGCGAATCACAATGGCGGTCAGATTCGTTTCGGAGGCGACGGCTATCTGTACATCGGTATGGGTGACGGC
GGATCGGCGGGCGATCCGATGGGCAACGGGCAGAACCTGGGAGCGCTGCTGGGCAAAATGCTGCGCATCGATGTGGAGAG
CGATCCGGGGAACGTGCGGATTCCGCCGGACAATCCGTTTGTGAATGCGGCGGGCGCCCGGCCGGAGATCTGGGCATACG
GATTACGCAACCCATGGAGGTACTCGTTCGACCGGGCGAGCGGCGATTTGTGGATCGCGGACGTCGGCCAGGACGCGTAC
GAGGAAGTGGATTTTCAGGCGGCTTCCAGCCGCGGCGGAGAGAACTACGGCTGGAACCGGATGGAGGGAATGCACTGCTA
TCCGGCGAATTGCAGCATGCAGGGGTTGACGCTGCCGGTGGCCGAATATCCACACTCACAAGGCTGCTCCGTGAGCGGCG
GATTCGTATATCGCGGACGATCTTCGCCGGGTCTGCGCGGAATTTATTTATACGGAGACTACTGCAGCGGCCGGATTTGG
GGCACCGAGCGCCAGGGCACCACCTGGCTTACGCGGCAACTGCTCGCCTCGAATTTCGGGATAACGACGTTTGGGGAGGA
CGAAGCAGGCGAAGTGTACGTGGCAAATGCCACTGACGGAACGATTCATCATATAGAAGGCAGCCTCGCGCCGCGGCTCA
CTACAGACGGAGTTACGAATGCGGCGAGCTTTGACCGCGGCCTCACGGCGGGCTCGCTGGCGACAATTTTCGTCGCGGGA
ATTCTGGACGATCCGGGTGTGATGAACGCGGGCGGAATCCCCGCGCCGACGTCGTTGGGAGGGGTCTCGGTAGCGGTGAA
CGGGGTCAACGCGCCGGTGCTATTGATCGCGAACGTCAAGGGCCAGGAGCAGATCAACTTCCAGGCGCCTTTTGAAATAC
GGGGACAATCGACAGTCAAGGTGATGGTGAGGCGCAACAACCAGTCGAGCGCCGCGGTGGATGTGCCGGTGCTGAGCGTG
CAGCCCGCGATATACACGATCCAGGGCGGGGCGGCCGTGGTGCACAATGTCGATTTCTCGCTGGTTACGGCGGCGCAGCC
ACTGGTTCCCGGAGAGTTTGCGTTTTTCTACGCTACGGGATTAGGACAGGTGAAGAACGAGCCGGCGACCGGGGCCGGCG
CGCCGCTGGGATCGCTCGCCACGTTGATTGCGGACGTGGGAGTCACGTTGGGTGGGCAGACATGCGACGTGCAGTATGCG
GGGCTGGCTCCGGGGCTGGTGGGCGTGTACCAGGTGAACTTCCGGGTTCCGCAGAACGCGGCCAGCGGGGCGCAAAGTCT
GGCGATCGCGGTGGCGGGAGCGACGAGCCCCGCGGCGAAGATAGCGATTCGATAA

Upstream 100 bases:

>100_bases
AAGATCGCTCCCTCACGATCGCGGTTCGCAATTAAACAAACTGATGCGCAGGTATGCCGCGCCACATTGTAAACGGCGGG
CGCCGGGATATGTTGGAGGC

Downstream 100 bases:

>100_bases
CACTCAAGACACTGACCGTTTCCGCGGGGCGAGCCGGCTGAAAGCCGGCTCTGGACTTTGGACATTTTTCTAGGCAGCCG
CAGTCTTTCCGAGGCTGATC

Product: glucose/sorbosone dehydrogenase-like protein

Products: NA

Alternate protein names: Asd [H]

Number of amino acids: Translated: 604; Mature: 604

Protein sequence:

>604_residues
MQRCAAALLACVMSAGAQEIRTTQIASGIAAPTDIQDPKDGSGRLFFVQQNGVVRIFRGGAVSSRPFLDISGKTRADGER
GLLGLAFPPGFAQKQRFYVDYTDLNGDTTIARYQVSTDREAADGASEVVLLKIAQPFANHNGGQIRFGGDGYLYIGMGDG
GSAGDPMGNGQNLGALLGKMLRIDVESDPGNVRIPPDNPFVNAAGARPEIWAYGLRNPWRYSFDRASGDLWIADVGQDAY
EEVDFQAASSRGGENYGWNRMEGMHCYPANCSMQGLTLPVAEYPHSQGCSVSGGFVYRGRSSPGLRGIYLYGDYCSGRIW
GTERQGTTWLTRQLLASNFGITTFGEDEAGEVYVANATDGTIHHIEGSLAPRLTTDGVTNAASFDRGLTAGSLATIFVAG
ILDDPGVMNAGGIPAPTSLGGVSVAVNGVNAPVLLIANVKGQEQINFQAPFEIRGQSTVKVMVRRNNQSSAAVDVPVLSV
QPAIYTIQGGAAVVHNVDFSLVTAAQPLVPGEFAFFYATGLGQVKNEPATGAGAPLGSLATLIADVGVTLGGQTCDVQYA
GLAPGLVGVYQVNFRVPQNAASGAQSLAIAVAGATSPAAKIAIR

Sequences:

>Translated_604_residues
MQRCAAALLACVMSAGAQEIRTTQIASGIAAPTDIQDPKDGSGRLFFVQQNGVVRIFRGGAVSSRPFLDISGKTRADGER
GLLGLAFPPGFAQKQRFYVDYTDLNGDTTIARYQVSTDREAADGASEVVLLKIAQPFANHNGGQIRFGGDGYLYIGMGDG
GSAGDPMGNGQNLGALLGKMLRIDVESDPGNVRIPPDNPFVNAAGARPEIWAYGLRNPWRYSFDRASGDLWIADVGQDAY
EEVDFQAASSRGGENYGWNRMEGMHCYPANCSMQGLTLPVAEYPHSQGCSVSGGFVYRGRSSPGLRGIYLYGDYCSGRIW
GTERQGTTWLTRQLLASNFGITTFGEDEAGEVYVANATDGTIHHIEGSLAPRLTTDGVTNAASFDRGLTAGSLATIFVAG
ILDDPGVMNAGGIPAPTSLGGVSVAVNGVNAPVLLIANVKGQEQINFQAPFEIRGQSTVKVMVRRNNQSSAAVDVPVLSV
QPAIYTIQGGAAVVHNVDFSLVTAAQPLVPGEFAFFYATGLGQVKNEPATGAGAPLGSLATLIADVGVTLGGQTCDVQYA
GLAPGLVGVYQVNFRVPQNAASGAQSLAIAVAGATSPAAKIAIR
>Mature_604_residues
MQRCAAALLACVMSAGAQEIRTTQIASGIAAPTDIQDPKDGSGRLFFVQQNGVVRIFRGGAVSSRPFLDISGKTRADGER
GLLGLAFPPGFAQKQRFYVDYTDLNGDTTIARYQVSTDREAADGASEVVLLKIAQPFANHNGGQIRFGGDGYLYIGMGDG
GSAGDPMGNGQNLGALLGKMLRIDVESDPGNVRIPPDNPFVNAAGARPEIWAYGLRNPWRYSFDRASGDLWIADVGQDAY
EEVDFQAASSRGGENYGWNRMEGMHCYPANCSMQGLTLPVAEYPHSQGCSVSGGFVYRGRSSPGLRGIYLYGDYCSGRIW
GTERQGTTWLTRQLLASNFGITTFGEDEAGEVYVANATDGTIHHIEGSLAPRLTTDGVTNAASFDRGLTAGSLATIFVAG
ILDDPGVMNAGGIPAPTSLGGVSVAVNGVNAPVLLIANVKGQEQINFQAPFEIRGQSTVKVMVRRNNQSSAAVDVPVLSV
QPAIYTIQGGAAVVHNVDFSLVTAAQPLVPGEFAFFYATGLGQVKNEPATGAGAPLGSLATLIADVGVTLGGQTCDVQYA
GLAPGLVGVYQVNFRVPQNAASGAQSLAIAVAGATSPAAKIAIR

Specific function: Aldose sugar dehydrogenase with broad substrate specificity. The physiological substrate is unknown. Can oxidize glucose to gluconolactone. Can also utilize D-arabinose, L- arabinose and 2-deoxy-glucose. Has higher activity towards oligomeric sugars, such

COG id: COG2133

COG function: function code G; Glucose/sorbosone dehydrogenases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the PQQ oxidoreductase gdhB family [H]

Homologues:

Organism=Homo sapiens, GI187936953, Length=427, Percent_Identity=39.8126463700234, Blast_Score=254, Evalue=2e-67,
Organism=Homo sapiens, GI187936955, Length=400, Percent_Identity=40.75, Blast_Score=253, Evalue=3e-67,
Organism=Homo sapiens, GI124248546, Length=381, Percent_Identity=40.6824146981627, Blast_Score=251, Evalue=1e-66,
Organism=Homo sapiens, GI20143973, Length=377, Percent_Identity=31.0344827586207, Blast_Score=143, Evalue=5e-34,
Organism=Escherichia coli, GI1787060, Length=292, Percent_Identity=28.7671232876712, Blast_Score=102, Evalue=7e-23,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011042
- InterPro:   IPR012938
- InterPro:   IPR011041 [H]

Pfam domain/function: PF07995 GSDH [H]

EC number: NA

Molecular weight: Translated: 63133; Mature: 63133

Theoretical pI: Translated: 5.05; Mature: 5.05

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQRCAAALLACVMSAGAQEIRTTQIASGIAAPTDIQDPKDGSGRLFFVQQNGVVRIFRGG
CCHHHHHHHHHHHHCCHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEEEECCCEEEEEECC
AVSSRPFLDISGKTRADGERGLLGLAFPPGFAQKQRFYVDYTDLNGDTTIARYQVSTDRE
CCCCCCEEEECCCCCCCCCCCEEEEECCCCCCCCCEEEEEEECCCCCEEEEEEEECCCCC
AADGASEVVLLKIAQPFANHNGGQIRFGGDGYLYIGMGDGGSAGDPMGNGQNLGALLGKM
CCCCCCCEEEEEEECHHHCCCCCEEEECCCEEEEEEECCCCCCCCCCCCCCCHHHHHCEE
LRIDVESDPGNVRIPPDNPFVNAAGARPEIWAYGLRNPWRYSFDRASGDLWIADVGQDAY
EEEEEECCCCCEECCCCCCEEECCCCCCCEEEECCCCCCEEEEECCCCCEEEEECCCHHH
EEVDFQAASSRGGENYGWNRMEGMHCYPANCSMQGLTLPVAEYPHSQGCSVSGGFVYRGR
HHHCCHHHHCCCCCCCCCCCCCCCEEECCCCCCCCEEEEHHHCCCCCCCCCCCCEEEECC
SSPGLRGIYLYGDYCSGRIWGTERQGTTWLTRQLLASNFGITTFGEDEAGEVYVANATDG
CCCCEEEEEEEECCCCCEEECCCCCCCHHHHHHHHHHCCCEEECCCCCCCCEEEEECCCC
TIHHIEGSLAPRLTTDGVTNAASFDRGLTAGSLATIFVAGILDDPGVMNAGGIPAPTSLG
EEEEECCCCCCCEECCCCCCCHHHCCCCCCCCEEEEEEEEECCCCCCCCCCCCCCCCCCC
GVSVAVNGVNAPVLLIANVKGQEQINFQAPFEIRGQSTVKVMVRRNNQSSAAVDVPVLSV
CEEEEEECCCCCEEEEEECCCCCEEEEECCEEECCCCEEEEEEEECCCCCCEEEEEEEEE
QPAIYTIQGGAAVVHNVDFSLVTAAQPLVPGEFAFFYATGLGQVKNEPATGAGAPLGSLA
CCEEEEEECCEEEEEECCEEEEEECCCCCCCCEEEEEEECCCCCCCCCCCCCCCCHHHHH
TLIADVGVTLGGQTCDVQYAGLAPGLVGVYQVNFRVPQNAASGAQSLAIAVAGATSPAAK
HHHHHHCCEECCEEEEEEECCCCCCEEEEEEEEEECCCCCCCCCCEEEEEEECCCCCCEE
IAIR
EEEC
>Mature Secondary Structure
MQRCAAALLACVMSAGAQEIRTTQIASGIAAPTDIQDPKDGSGRLFFVQQNGVVRIFRGG
CCHHHHHHHHHHHHCCHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEEEECCCEEEEEECC
AVSSRPFLDISGKTRADGERGLLGLAFPPGFAQKQRFYVDYTDLNGDTTIARYQVSTDRE
CCCCCCEEEECCCCCCCCCCCEEEEECCCCCCCCCEEEEEEECCCCCEEEEEEEECCCCC
AADGASEVVLLKIAQPFANHNGGQIRFGGDGYLYIGMGDGGSAGDPMGNGQNLGALLGKM
CCCCCCCEEEEEEECHHHCCCCCEEEECCCEEEEEEECCCCCCCCCCCCCCCHHHHHCEE
LRIDVESDPGNVRIPPDNPFVNAAGARPEIWAYGLRNPWRYSFDRASGDLWIADVGQDAY
EEEEEECCCCCEECCCCCCEEECCCCCCCEEEECCCCCCEEEEECCCCCEEEEECCCHHH
EEVDFQAASSRGGENYGWNRMEGMHCYPANCSMQGLTLPVAEYPHSQGCSVSGGFVYRGR
HHHCCHHHHCCCCCCCCCCCCCCCEEECCCCCCCCEEEEHHHCCCCCCCCCCCCEEEECC
SSPGLRGIYLYGDYCSGRIWGTERQGTTWLTRQLLASNFGITTFGEDEAGEVYVANATDG
CCCCEEEEEEEECCCCCEEECCCCCCCHHHHHHHHHHCCCEEECCCCCCCCEEEEECCCC
TIHHIEGSLAPRLTTDGVTNAASFDRGLTAGSLATIFVAGILDDPGVMNAGGIPAPTSLG
EEEEECCCCCCCEECCCCCCCHHHCCCCCCCCEEEEEEEEECCCCCCCCCCCCCCCCCCC
GVSVAVNGVNAPVLLIANVKGQEQINFQAPFEIRGQSTVKVMVRRNNQSSAAVDVPVLSV
CEEEEEECCCCCEEEEEECCCCCEEEEECCEEECCCCEEEEEEEECCCCCCEEEEEEEEE
QPAIYTIQGGAAVVHNVDFSLVTAAQPLVPGEFAFFYATGLGQVKNEPATGAGAPLGSLA
CCEEEEEECCEEEEEECCEEEEEECCCCCCCCEEEEEEECCCCCCCCCCCCCCCCHHHHH
TLIADVGVTLGGQTCDVQYAGLAPGLVGVYQVNFRVPQNAASGAQSLAIAVAGATSPAAK
HHHHHHCCEECCEEEEEEECCCCCCEEEEEEEEEECCCCCCCCCCEEEEEEECCCCCCEE
IAIR
EEEC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8905232; 9278503 [H]