| Definition | Candidatus Solibacter usitatus Ellin6076 chromosome, complete genome. |
|---|---|
| Accession | NC_008536 |
| Length | 9,965,640 |
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The map label for this gene is nreB [H]
Identifier: 116621569
GI number: 116621569
Start: 3113172
End: 3114194
Strand: Reverse
Name: nreB [H]
Synonym: Acid_2451
Alternate gene names: 116621569
Gene position: 3114194-3113172 (Counterclockwise)
Preceding gene: 116621570
Following gene: 116621568
Centisome position: 31.25
GC content: 62.56
Gene sequence:
>1023_bases ATGCCCGACGCGCAAAGCCAGTCTGAAGAAAATCTGGCGGAACTATTTCTGGAGCAGACTCCTGCCTGCCAGTGGATGGT TTCAGCGTCGGGCATCTTCGACCGGTTTTTCGGTGATCCAACGCCGCTGTTCGGCAAGCGGGCCGCGGACCTCACAGGCA GGCTTCCGGCCGCAGTGCTGGGGAAGGAATCCGGCGTTACGTGGAGCGGCCGTTTTGTGCGCGCGTTGAAGGGCGAGACC CTGCTGCTGAACGAGCGGCGCGGCAAGAACTCATGGTTCGTGACGGTGTTCCCGGTGCGATGCGAAGGGGAGATTCGCTA CGCGGGAGCGCTCGCGCGAGAGATCACGCCTTGGACTCACGCGGAGCAGGAACTGCGTCACACGGTGTTGGGGGCGCTCA GGGCGCAGGAGTTCGAGCGCACGATGGTCTCCAAATTCCTGCACGATTCGGTGGGGCAAAACCTGACGGCGCTCGGGCTG CAACTGGACCTGATCCGGATGGACATGGAGAGCATTTCGCCGGAGACATGCGCGCGCGCGATCGAAGTGCAGAAGCTGCT GGAAGAGATGATGGAGAGCGTGCGCGAGTACAGCTACGAACTCAATCCATCGACGGTGGAGCGGGCGGGGCTGCGGGCGG CGCTGGACCGGCTGGCGACGCGGATTCGCGGGCGCTATCCCGGAGCATTGCGAGTCAACGTGGATCCGTTCCTGAAGATC GATCCGTCACTGGCGCGGCCGATGTACCAGATCGGGCAGGAAGCGGTGGAGAACGCGGTGCAACATTCGAGTTGCTCGAC AATCGAAATCGCGGTAAAGTCCACGCGTACTGGTACTGTATTAGAGGTGCGTGATAATGGACGGGGGTTCGATCCGGCCG ATTTGATAGCCGGACGGCGCGGGCTGGGGCTGCTGAGCATGGAGCATTACGCAGCGGAGGCGGGCCTGGAACTTTCGATC ACGAGTACGCGGGAATTTGGAACTACGGTGCGGGCCGCGACGCCGGAAGCCGCCGAGAGATAA
Upstream 100 bases:
>100_bases GGGGCAGCCGGAGGAGTTGCTGGAGAAATACCACCTGGTGGCTCCGGACATCGCCGACGCGGCACGCAAAGCGCTATCGC GTAAGCGGTAATCTGTAGAG
Downstream 100 bases:
>100_bases ATATGCCGTTCGACATTGTTCTTGTCGATGATCACAAGCTGGTTCGGGATGGAGTGCGAATGATCCTCGAGAGGGGATCG GAATTCCTGGTGGTGGGCGA
Product: histidine kinase
Products: NA
Alternate protein names: Nitrogen regulation protein B [H]
Number of amino acids: Translated: 340; Mature: 339
Protein sequence:
>340_residues MPDAQSQSEENLAELFLEQTPACQWMVSASGIFDRFFGDPTPLFGKRAADLTGRLPAAVLGKESGVTWSGRFVRALKGET LLLNERRGKNSWFVTVFPVRCEGEIRYAGALAREITPWTHAEQELRHTVLGALRAQEFERTMVSKFLHDSVGQNLTALGL QLDLIRMDMESISPETCARAIEVQKLLEEMMESVREYSYELNPSTVERAGLRAALDRLATRIRGRYPGALRVNVDPFLKI DPSLARPMYQIGQEAVENAVQHSSCSTIEIAVKSTRTGTVLEVRDNGRGFDPADLIAGRRGLGLLSMEHYAAEAGLELSI TSTREFGTTVRAATPEAAER
Sequences:
>Translated_340_residues MPDAQSQSEENLAELFLEQTPACQWMVSASGIFDRFFGDPTPLFGKRAADLTGRLPAAVLGKESGVTWSGRFVRALKGET LLLNERRGKNSWFVTVFPVRCEGEIRYAGALAREITPWTHAEQELRHTVLGALRAQEFERTMVSKFLHDSVGQNLTALGL QLDLIRMDMESISPETCARAIEVQKLLEEMMESVREYSYELNPSTVERAGLRAALDRLATRIRGRYPGALRVNVDPFLKI DPSLARPMYQIGQEAVENAVQHSSCSTIEIAVKSTRTGTVLEVRDNGRGFDPADLIAGRRGLGLLSMEHYAAEAGLELSI TSTREFGTTVRAATPEAAER >Mature_339_residues PDAQSQSEENLAELFLEQTPACQWMVSASGIFDRFFGDPTPLFGKRAADLTGRLPAAVLGKESGVTWSGRFVRALKGETL LLNERRGKNSWFVTVFPVRCEGEIRYAGALAREITPWTHAEQELRHTVLGALRAQEFERTMVSKFLHDSVGQNLTALGLQ LDLIRMDMESISPETCARAIEVQKLLEEMMESVREYSYELNPSTVERAGLRAALDRLATRIRGRYPGALRVNVDPFLKID PSLARPMYQIGQEAVENAVQHSSCSTIEIAVKSTRTGTVLEVRDNGRGFDPADLIAGRRGLGLLSMEHYAAEAGLELSIT STREFGTTVRAATPEAAER
Specific function: Member of the two-component regulatory system nreB/nreC involved in the control of dissimilatory nitrate/nitrite reduction in response to oxygen. NreB functions as a direct oxygen sensor histidine kinase which is autophosphorylated, in the absence of oxyg
COG id: COG4585
COG function: function code T; Signal transduction histidine kinase
Gene ontology:
Cell location: Cytoplasm (Potential) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 histidine kinase domain [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003594 - InterPro: IPR004358 - InterPro: IPR011712 - InterPro: IPR005467 - InterPro: IPR017203 [H]
Pfam domain/function: PF02518 HATPase_c; PF07730 HisKA_3 [H]
EC number: =2.7.13.3 [H]
Molecular weight: Translated: 37645; Mature: 37514
Theoretical pI: Translated: 5.53; Mature: 5.53
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPDAQSQSEENLAELFLEQTPACQWMVSASGIFDRFFGDPTPLFGKRAADLTGRLPAAVL CCCCCCCCHHHHHHHHHHCCCCCEEEEHHHHHHHHHCCCCCCCCCCHHHHHCCCCCHHHH GKESGVTWSGRFVRALKGETLLLNERRGKNSWFVTVFPVRCEGEIRYAGALAREITPWTH CCCCCCEECCHHHHHHCCCEEEEECCCCCCCEEEEEEEEEECCCEEHHHHHHHHCCCCCH AEQELRHTVLGALRAQEFERTMVSKFLHDSVGQNLTALGLQLDLIRMDMESISPETCARA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCHHHHHHH IEVQKLLEEMMESVREYSYELNPSTVERAGLRAALDRLATRIRGRYPGALRVNVDPFLKI HHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCEEEECCCCCEEE DPSLARPMYQIGQEAVENAVQHSSCSTIEIAVKSTRTGTVLEVRDNGRGFDPADLIAGRR CHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCCEEEEECCCCCCCCHHHHHCCCC GLGLLSMEHYAAEAGLELSITSTREFGTTVRAATPEAAER CCCCHHHHHHHHHCCCEEEEECCHHHCCEEECCCCHHCCC >Mature Secondary Structure PDAQSQSEENLAELFLEQTPACQWMVSASGIFDRFFGDPTPLFGKRAADLTGRLPAAVL CCCCCCCHHHHHHHHHHCCCCCEEEEHHHHHHHHHCCCCCCCCCCHHHHHCCCCCHHHH GKESGVTWSGRFVRALKGETLLLNERRGKNSWFVTVFPVRCEGEIRYAGALAREITPWTH CCCCCCEECCHHHHHHCCCEEEEECCCCCCCEEEEEEEEEECCCEEHHHHHHHHCCCCCH AEQELRHTVLGALRAQEFERTMVSKFLHDSVGQNLTALGLQLDLIRMDMESISPETCARA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCHHHHHHH IEVQKLLEEMMESVREYSYELNPSTVERAGLRAALDRLATRIRGRYPGALRVNVDPFLKI HHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCEEEECCCCCEEE DPSLARPMYQIGQEAVENAVQHSSCSTIEIAVKSTRTGTVLEVRDNGRGFDPADLIAGRR CHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCCEEEEECCCCCCCCHHHHHCCCC GLGLLSMEHYAAEAGLELSITSTREFGTTVRAATPEAAER CCCCHHHHHHHHHCCCEEEEECCHHHCCEEECCCCHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA