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The map label for this gene is yraN [C]

Identifier: 116621551

GI number: 116621551

Start: 3096491

End: 3096889

Strand: Reverse

Name: yraN [C]

Synonym: Acid_2433

Alternate gene names: 116621551

Gene position: 3096889-3096491 (Counterclockwise)

Preceding gene: 116621552

Following gene: 116621550

Centisome position: 31.08

GC content: 65.41

Gene sequence:

>399_bases
ATGATCGGACTGCTTTACCGCGCCGCGGACCGGCTCCGGCGGCGGCGCTACCCGGAAAATCACGGACGCATCGGCGAAGA
CCTGGCTCACCGCTACCTGCGCTCGCAGGGATGCACGGTGGTGGCGCGCAACTATCGGACACTGGCGGGGACGGGCGAAA
TCGACCTGGTGGTGTGGGACGGCGGGCGGCTCGCATTCGTCGAAGTGAAGACGCGGAGCAGCACGGATTTCGGCCCGCCC
GAATCCGCGGTGGACGCAGAAAAGAGGGACCGATTGCGCACCGCGGCGCGCGATTACGTCCGCCGCGCCGACGTGGACTG
GAAGGCCGTGCGGTTCGACATCGTCAGCGTAATTTTGCAAGCGTCTCCTAAGATCGAATGGCTTCGCGGCGCATTTTGA

Upstream 100 bases:

>100_bases
TCCTGGTGAACCGGTTCCCGCGCTACCGGCGCTTTTGGGAGCACTACCTCTGTTACGTGGTGCGCGGAAAAGTCATGGAA
TTCGAGTTTGAAGTGTTGAA

Downstream 100 bases:

>100_bases
GCGGTAAAATAGAGAACCATGACCTATTACGGAAACAAAGAACTCGCCGCATCTTTTCGCACGGTGAGAGCCAACACGCT
GAAGCTTGCCGAAGACGTGC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 132; Mature: 132

Protein sequence:

>132_residues
MIGLLYRAADRLRRRRYPENHGRIGEDLAHRYLRSQGCTVVARNYRTLAGTGEIDLVVWDGGRLAFVEVKTRSSTDFGPP
ESAVDAEKRDRLRTAARDYVRRADVDWKAVRFDIVSVILQASPKIEWLRGAF

Sequences:

>Translated_132_residues
MIGLLYRAADRLRRRRYPENHGRIGEDLAHRYLRSQGCTVVARNYRTLAGTGEIDLVVWDGGRLAFVEVKTRSSTDFGPP
ESAVDAEKRDRLRTAARDYVRRADVDWKAVRFDIVSVILQASPKIEWLRGAF
>Mature_132_residues
MIGLLYRAADRLRRRRYPENHGRIGEDLAHRYLRSQGCTVVARNYRTLAGTGEIDLVVWDGGRLAFVEVKTRSSTDFGPP
ESAVDAEKRDRLRTAARDYVRRADVDWKAVRFDIVSVILQASPKIEWLRGAF

Specific function: Unknown

COG id: COG0792

COG function: function code L; Predicted endonuclease distantly related to archaeal Holliday junction resolvase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0102 family

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): Y2433_SOLUE (Q025A4)

Other databases:

- EMBL:   CP000473
- RefSeq:   YP_823707.1
- ProteinModelPortal:   Q025A4
- STRING:   Q025A4
- GeneID:   4429364
- GenomeReviews:   CP000473_GR
- KEGG:   sus:Acid_2433
- NMPDR:   fig|234267.9.peg.2329
- eggNOG:   COG0792
- HOGENOM:   HBG710155
- OMA:   MAEHNEL
- HAMAP:   MF_00048
- InterPro:   IPR011856
- InterPro:   IPR011335
- InterPro:   IPR003509
- Gene3D:   G3DSA:3.40.1350.10

Pfam domain/function: PF02021 UPF0102; SSF52980 Restrict_endonuc_II-like_core

EC number: NA

Molecular weight: Translated: 15133; Mature: 15133

Theoretical pI: Translated: 10.48; Mature: 10.48

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
0.8 %Met     (Translated Protein)
1.5 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
0.8 %Met     (Mature Protein)
1.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIGLLYRAADRLRRRRYPENHGRIGEDLAHRYLRSQGCTVVARNYRTLAGTGEIDLVVWD
CCCHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHCCCEEEECCCEEEECCCCEEEEEEC
GGRLAFVEVKTRSSTDFGPPESAVDAEKRDRLRTAARDYVRRADVDWKAVRFDIVSVILQ
CCEEEEEEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHH
ASPKIEWLRGAF
CCCCCHHHCCCC
>Mature Secondary Structure
MIGLLYRAADRLRRRRYPENHGRIGEDLAHRYLRSQGCTVVARNYRTLAGTGEIDLVVWD
CCCHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHCCCEEEECCCEEEECCCCEEEEEEC
GGRLAFVEVKTRSSTDFGPPESAVDAEKRDRLRTAARDYVRRADVDWKAVRFDIVSVILQ
CCEEEEEEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHH
ASPKIEWLRGAF
CCCCCHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA