| Definition | Candidatus Solibacter usitatus Ellin6076 chromosome, complete genome. |
|---|---|
| Accession | NC_008536 |
| Length | 9,965,640 |
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The map label for this gene is 116621540
Identifier: 116621540
GI number: 116621540
Start: 3085636
End: 3086424
Strand: Reverse
Name: 116621540
Synonym: Acid_2422
Alternate gene names: NA
Gene position: 3086424-3085636 (Counterclockwise)
Preceding gene: 116621541
Following gene: 116621536
Centisome position: 30.97
GC content: 48.92
Gene sequence:
>789_bases ATGCCTATACCGACGATGACGGAAGCTGAGATTATCAGCTACTTAGAGAGAACTCAGTTGCCAACTGTGTTGGTGGAAGG AAAGGATGACGCTTCTATCTATCGTTGGATTGAAAAGCGCCTGGGCGTGATGTCAGGAAGCGTGCTTATTTGCTCTGGCC GTGATGTACTGTTGTCAATATATCGGAAGCGTCACCAATTCAGCCATGCAAGCATTGCTTGGCTCGCAGATCGTGACATG TGGCTATACACATGTCCGCCGGAAGATCTGGGGGATGTGGTCTTTACTGCGGGTTACAGCATTGAAAACGACGTTTACGC AGGTTCAGAGATTGAGTCGCTGCTCGATGGATCGGAGTTAGATAGTCATCGGCGGCTCTTGGCTACATTATCTCGATGGT TCGCCTTTGAGGTAGCCGAGTTTCGTGGGTGTCGGGAGACGCGACAAGCAATCCACATTAACAGGATAGTGGATTTTGGA AATATGGATCTAATTCCAGCGTTTATAGTAGATCGAGGGTATAGCGAGCCCGACGCCGCGATCGTAAACGACGTGTTGAC GAATTACAAATTGTACTTGAGAGGCAAGACTTTACTCCAGGCCATCGTGCATTTTCTTAGTGAGTCCAACCGCACACCAA AGTACAGCCACGCCGCAGTCCTGGATATGAGCCTGAGATTGTACCCTGCCAATCCGTACATTAAGAGAATCGTCCAGGAA GTTCAGTATCAACTAAGCCCCGACACAAAACAGTCACCCCAATGGAATGTAGCTGGGATTTCTGGGTGA
Upstream 100 bases:
>100_bases GACCGGGAATCAATTTATTATTGCTACACACTCACCCTTCATATACTCCAAATTTGCCGACAAGGAGTTGGCGCTCTCAT CCGACCGCGGTGAATAACTT
Downstream 100 bases:
>100_bases ATCAGGAGTTTACAACGGTGGCTGGAGCCTCCAGGAAACCGCGCGCACATAGAGGAAGGGGTTCGCGGAGCAGGTCTACC CTGCCCCGCGACTTACTCAC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 262; Mature: 261
Protein sequence:
>262_residues MPIPTMTEAEIISYLERTQLPTVLVEGKDDASIYRWIEKRLGVMSGSVLICSGRDVLLSIYRKRHQFSHASIAWLADRDM WLYTCPPEDLGDVVFTAGYSIENDVYAGSEIESLLDGSELDSHRRLLATLSRWFAFEVAEFRGCRETRQAIHINRIVDFG NMDLIPAFIVDRGYSEPDAAIVNDVLTNYKLYLRGKTLLQAIVHFLSESNRTPKYSHAAVLDMSLRLYPANPYIKRIVQE VQYQLSPDTKQSPQWNVAGISG
Sequences:
>Translated_262_residues MPIPTMTEAEIISYLERTQLPTVLVEGKDDASIYRWIEKRLGVMSGSVLICSGRDVLLSIYRKRHQFSHASIAWLADRDM WLYTCPPEDLGDVVFTAGYSIENDVYAGSEIESLLDGSELDSHRRLLATLSRWFAFEVAEFRGCRETRQAIHINRIVDFG NMDLIPAFIVDRGYSEPDAAIVNDVLTNYKLYLRGKTLLQAIVHFLSESNRTPKYSHAAVLDMSLRLYPANPYIKRIVQE VQYQLSPDTKQSPQWNVAGISG >Mature_261_residues PIPTMTEAEIISYLERTQLPTVLVEGKDDASIYRWIEKRLGVMSGSVLICSGRDVLLSIYRKRHQFSHASIAWLADRDMW LYTCPPEDLGDVVFTAGYSIENDVYAGSEIESLLDGSELDSHRRLLATLSRWFAFEVAEFRGCRETRQAIHINRIVDFGN MDLIPAFIVDRGYSEPDAAIVNDVLTNYKLYLRGKTLLQAIVHFLSESNRTPKYSHAAVLDMSLRLYPANPYIKRIVQEV QYQLSPDTKQSPQWNVAGISG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 29795; Mature: 29664
Theoretical pI: Translated: 5.65; Mature: 5.65
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPIPTMTEAEIISYLERTQLPTVLVEGKDDASIYRWIEKRLGVMSGSVLICSGRDVLLSI CCCCCCCHHHHHHHHHHCCCCEEEEECCCCHHHHHHHHHHHHHCCCCEEEECCCHHHHHH YRKRHQFSHASIAWLADRDMWLYTCPPEDLGDVVFTAGYSIENDVYAGSEIESLLDGSEL HHHHHHCCCCEEEEEECCCEEEEECCCCCCCCEEEECCCCCCCCCCCCHHHHHHHCCCCH DSHRRLLATLSRWFAFEVAEFRGCRETRQAIHINRIVDFGNMDLIPAFIVDRGYSEPDAA HHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHEECCCCCHHHHHHHHCCCCCCHHH IVNDVLTNYKLYLRGKTLLQAIVHFLSESNRTPKYSHAAVLDMSLRLYPANPYIKRIVQE HHHHHHHCCEEEEECHHHHHHHHHHHHCCCCCCCCCCCEEEEEEEEEECCCHHHHHHHHH VQYQLSPDTKQSPQWNVAGISG HHHHCCCCCCCCCCCCCCCCCC >Mature Secondary Structure PIPTMTEAEIISYLERTQLPTVLVEGKDDASIYRWIEKRLGVMSGSVLICSGRDVLLSI CCCCCCHHHHHHHHHHCCCCEEEEECCCCHHHHHHHHHHHHHCCCCEEEECCCHHHHHH YRKRHQFSHASIAWLADRDMWLYTCPPEDLGDVVFTAGYSIENDVYAGSEIESLLDGSEL HHHHHHCCCCEEEEEECCCEEEEECCCCCCCCEEEECCCCCCCCCCCCHHHHHHHCCCCH DSHRRLLATLSRWFAFEVAEFRGCRETRQAIHINRIVDFGNMDLIPAFIVDRGYSEPDAA HHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHEECCCCCHHHHHHHHCCCCCCHHH IVNDVLTNYKLYLRGKTLLQAIVHFLSESNRTPKYSHAAVLDMSLRLYPANPYIKRIVQE HHHHHHHCCEEEEECHHHHHHHHHHHHCCCCCCCCCCCEEEEEEEEEECCCHHHHHHHHH VQYQLSPDTKQSPQWNVAGISG HHHHCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA