| Definition | Candidatus Solibacter usitatus Ellin6076 chromosome, complete genome. |
|---|---|
| Accession | NC_008536 |
| Length | 9,965,640 |
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The map label for this gene is macB [H]
Identifier: 116621526
GI number: 116621526
Start: 3068876
End: 3071230
Strand: Reverse
Name: macB [H]
Synonym: Acid_2408
Alternate gene names: 116621526
Gene position: 3071230-3068876 (Counterclockwise)
Preceding gene: 116621527
Following gene: 116621518
Centisome position: 30.82
GC content: 66.5
Gene sequence:
>2355_bases GTGGACTTCCGTATCGCCCTGCGAACCTTGTGCCGCTACCCCGCATTCACCGCCCTCGCAGTAGTCACGCTCGCTCTCGG CATCGCCTCCACCACCGCGATCTTCAGCGTCGTAAAGGCCGTCCTCCTGACTCAACTCCCCTACCGCGATCCGGACCGCG TGATGGCGTTGTCGCAGGTCGGCGAATGGACCGCCCATGAGTTACCCACACGCACGCAATCCATCGAGAGCATCTCCCTC TACGGCGACACCCAGCGCACTCTGGTAGACAACGGCGACCCTGAAGTCCTGCGCGGCCTGCGCGTGACCCATGAATTCTT CGAGACTCTCGGCGCAACCATGGCGCTCGGTCGCACGTTCACTCCGGCCGAGGATCGGTGGCCTCGCGCCAACGTCGTCA TCCTCAATCACCCCCTCTGGGTTCGGCGCTTCGCCAGCGACCCCCGGATCGTCGGCCGCGTCCTCCAACTCACCGGCGAA CCCTATCTCGTCATCGGAGTCCTGCCCCCCGATTTCCAGCCCTTGCGCATGAGCAATCCCGCCGAGAAGCCGCAAATCTT CATGCCCGCGGGCTATGAACCGCATCGCACCGCGCTCTGCCGCGGCTGCCTGGATGCCCGCGCCATTGCCCGGCTGCGTC GCGGCATCACCCTGGCGGACGCCCGCACCGACCTGAACGCCGCAATGCGCGAGATCGTCCGCCAATATCCTGCCGACTTC GCTCCCGACATCTCCATCCGCATCGCGCCCTTACGGGATCGCATGATCGCTCCGATCCTCACCCCGCTCTACGTGCTTTC GGCCGCCGTCTGCGCCCTTCTCCTGATCGCCTGCGCGAATCTCACAAGCCTGCTGCTCGCTCGTGTGACGGCCCGGTCGC CCGAACTCGCCCTCCGCGCCGCGCTTGGCGCCGGACGCGCTCGCATCGCCGCACACCTGCTGACGGAGAGTTTGATCCTG TCGCTCGCCGGAGGCGCTGCGGGCGCCCTTCTGGCCTGGCCCGCCATCGCCATCCTTACATCGCTCGCCCCCAGGGAATT GCCGCGCCTCGATGAAATCCATCTGGACTCGAGCGTTCTTCTCTTCGCCCTCGGCGCCAGCCTGTTTGCCGGCCTCAGCG TCGCGATCGTGCCCGCCTGGCGCGCGGTCCGCATCGACCTGAACCGCGAGCTCAAGCGCCCCGCACGCGGCGGCCTTCGC AATCTCCTCGTGGTCGCGGAAATCGCCATGGCCTTCGTTCTCGGTGTCGGCGCCGCCCTCCTCGGCAAGAGCCTTCTCCG CCTGACCGCGGTCGATTCCGGCTTCGATCCGCACCACATCCTTACGCTCACCTTGAGCCTTAGCCCGAACCGCTACCGCA CGCAGGACGGCGCCCGACAGTATTACCGCCAAGTCGAACAGAACCTCCGGGCCGTACCCGGAGTTCTGGACATCGGCCTG GTCGATAACGTTCCGCTGAGCCACACCATCCCGGTGAAGTTCCGCCTCTCCGCCGGCGACACCAGCGCGTCGGCCGCAGA TCTCTTCCGCGCATCGCCAGGCTACTTCCGCGTCCTCAAGATTCCCTTGCGCCGCGGCCGCCTCTTCACCGGACAAGACG GCGTTACCGGACCGCCCACCGTGATCGTCAGCGAGTCCTTCGCCAGGTCGCAGTTCCCCGGCACCGACCCGATCGGTCAA TCCATCCAACTCGGTCCCGTCAACGAACACCGCCCCTGGCTGACCATCGCGGGAGTCGTCGGCGATGTACGCCAGGAGGG TTTGGACCGCGCGCCCGATCAGGCAATCTACATTCCGCAGGCCGCCGATCCGCTCGACTATATTCGCCTCCTGGTTCGCA CCACCGGCGACCCGCTGCGCTCCGAGCGCGGCATCCGTAACGCAGTCCGCCTGGCAGACCCGGACCAGCCGGTATTTCAT GTCCAGCCGATGGACGACTACGTGGCGTCCTCTCTCGCCGATCGTACCTTCACGCTCACGCTGATCAGCCTCTTCGGATC CATCGCGCTCCTCCTGGCGGCCATCGGAATCTATGGCGTCATCTCGCACACGGTGGGCCTGCGTACTCGCGAGTTGGGAA TCCGCATGGCGCTGGGAGCCGCCCGGAGCACCGTCGTGAGGATGATCCTCCGCGATGTCCTGATCCTGCTCGTCTCGGGC CTGACCGCCGGCGTCCTCGCCGCGCTCGCGCTAACCCGCTTCCTGTCACATCTGTTATTTGAGGTCCGCCCTACCGATAT CACGACCGCTGCGGGCGTCGCGCTGCTGCTGGCGTGCGTCGCGTTGTTGGCCGCGTCCCTACCCACCTTGCGAGCCGCCG CCATCGACCCCAATCTCGCGCTCCGCTCGGAGTGA
Upstream 100 bases:
>100_bases ACCGTCAGCGCCTCCAAATTGGGCATCACCTGCGCCGCGCTTTTTTGAGAAGTATTCGTTGCTCCTCTTGGGGCTTTCGC CCGCGTGCTATCTCTAAATT
Downstream 100 bases:
>100_bases CCTGCTACTCGATCACTCCCACTAATTTCGACGCGATGATCCGCTGATCCGCAGTTACAAGCCGCAGCCTGTGAATCCGT GCCGTCGCCACAATCACCCG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 784; Mature: 784
Protein sequence:
>784_residues MDFRIALRTLCRYPAFTALAVVTLALGIASTTAIFSVVKAVLLTQLPYRDPDRVMALSQVGEWTAHELPTRTQSIESISL YGDTQRTLVDNGDPEVLRGLRVTHEFFETLGATMALGRTFTPAEDRWPRANVVILNHPLWVRRFASDPRIVGRVLQLTGE PYLVIGVLPPDFQPLRMSNPAEKPQIFMPAGYEPHRTALCRGCLDARAIARLRRGITLADARTDLNAAMREIVRQYPADF APDISIRIAPLRDRMIAPILTPLYVLSAAVCALLLIACANLTSLLLARVTARSPELALRAALGAGRARIAAHLLTESLIL SLAGGAAGALLAWPAIAILTSLAPRELPRLDEIHLDSSVLLFALGASLFAGLSVAIVPAWRAVRIDLNRELKRPARGGLR NLLVVAEIAMAFVLGVGAALLGKSLLRLTAVDSGFDPHHILTLTLSLSPNRYRTQDGARQYYRQVEQNLRAVPGVLDIGL VDNVPLSHTIPVKFRLSAGDTSASAADLFRASPGYFRVLKIPLRRGRLFTGQDGVTGPPTVIVSESFARSQFPGTDPIGQ SIQLGPVNEHRPWLTIAGVVGDVRQEGLDRAPDQAIYIPQAADPLDYIRLLVRTTGDPLRSERGIRNAVRLADPDQPVFH VQPMDDYVASSLADRTFTLTLISLFGSIALLLAAIGIYGVISHTVGLRTRELGIRMALGAARSTVVRMILRDVLILLVSG LTAGVLAALALTRFLSHLLFEVRPTDITTAAGVALLLACVALLAASLPTLRAAAIDPNLALRSE
Sequences:
>Translated_784_residues MDFRIALRTLCRYPAFTALAVVTLALGIASTTAIFSVVKAVLLTQLPYRDPDRVMALSQVGEWTAHELPTRTQSIESISL YGDTQRTLVDNGDPEVLRGLRVTHEFFETLGATMALGRTFTPAEDRWPRANVVILNHPLWVRRFASDPRIVGRVLQLTGE PYLVIGVLPPDFQPLRMSNPAEKPQIFMPAGYEPHRTALCRGCLDARAIARLRRGITLADARTDLNAAMREIVRQYPADF APDISIRIAPLRDRMIAPILTPLYVLSAAVCALLLIACANLTSLLLARVTARSPELALRAALGAGRARIAAHLLTESLIL SLAGGAAGALLAWPAIAILTSLAPRELPRLDEIHLDSSVLLFALGASLFAGLSVAIVPAWRAVRIDLNRELKRPARGGLR NLLVVAEIAMAFVLGVGAALLGKSLLRLTAVDSGFDPHHILTLTLSLSPNRYRTQDGARQYYRQVEQNLRAVPGVLDIGL VDNVPLSHTIPVKFRLSAGDTSASAADLFRASPGYFRVLKIPLRRGRLFTGQDGVTGPPTVIVSESFARSQFPGTDPIGQ SIQLGPVNEHRPWLTIAGVVGDVRQEGLDRAPDQAIYIPQAADPLDYIRLLVRTTGDPLRSERGIRNAVRLADPDQPVFH VQPMDDYVASSLADRTFTLTLISLFGSIALLLAAIGIYGVISHTVGLRTRELGIRMALGAARSTVVRMILRDVLILLVSG LTAGVLAALALTRFLSHLLFEVRPTDITTAAGVALLLACVALLAASLPTLRAAAIDPNLALRSE >Mature_784_residues MDFRIALRTLCRYPAFTALAVVTLALGIASTTAIFSVVKAVLLTQLPYRDPDRVMALSQVGEWTAHELPTRTQSIESISL YGDTQRTLVDNGDPEVLRGLRVTHEFFETLGATMALGRTFTPAEDRWPRANVVILNHPLWVRRFASDPRIVGRVLQLTGE PYLVIGVLPPDFQPLRMSNPAEKPQIFMPAGYEPHRTALCRGCLDARAIARLRRGITLADARTDLNAAMREIVRQYPADF APDISIRIAPLRDRMIAPILTPLYVLSAAVCALLLIACANLTSLLLARVTARSPELALRAALGAGRARIAAHLLTESLIL SLAGGAAGALLAWPAIAILTSLAPRELPRLDEIHLDSSVLLFALGASLFAGLSVAIVPAWRAVRIDLNRELKRPARGGLR NLLVVAEIAMAFVLGVGAALLGKSLLRLTAVDSGFDPHHILTLTLSLSPNRYRTQDGARQYYRQVEQNLRAVPGVLDIGL VDNVPLSHTIPVKFRLSAGDTSASAADLFRASPGYFRVLKIPLRRGRLFTGQDGVTGPPTVIVSESFARSQFPGTDPIGQ SIQLGPVNEHRPWLTIAGVVGDVRQEGLDRAPDQAIYIPQAADPLDYIRLLVRTTGDPLRSERGIRNAVRLADPDQPVFH VQPMDDYVASSLADRTFTLTLISLFGSIALLLAAIGIYGVISHTVGLRTRELGIRMALGAARSTVVRMILRDVLILLVSG LTAGVLAALALTRFLSHLLFEVRPTDITTAAGVALLLACVALLAASLPTLRAAAIDPNLALRSE
Specific function: Part of the ABC transporter complex MacAB involved in macrolide export. Transmembrane domains (TMD) form a pore in the inner membrane and the ATP-binding domain (NBD) is responsible for energy generation [H]
COG id: COG0577
COG function: function code V; ABC-type antimicrobial peptide transport system, permease component
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 ABC transporter domain [H]
Homologues:
Organism=Escherichia coli, GI1787105, Length=313, Percent_Identity=28.7539936102236, Blast_Score=67, Evalue=4e-12,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003439 - InterPro: IPR017871 - InterPro: IPR017911 - InterPro: IPR003593 - InterPro: IPR003838 [H]
Pfam domain/function: PF00005 ABC_tran; PF02687 FtsX [H]
EC number: NA
Molecular weight: Translated: 84768; Mature: 84768
Theoretical pI: Translated: 10.05; Mature: 10.05
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 2.2 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDFRIALRTLCRYPAFTALAVVTLALGIASTTAIFSVVKAVLLTQLPYRDPDRVMALSQV CCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHH GEWTAHELPTRTQSIESISLYGDTQRTLVDNGDPEVLRGLRVTHEFFETLGATMALGRTF CCHHHHHCCCHHHCCCEEEEECCCCHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCC TPAEDRWPRANVVILNHPLWVRRFASDPRIVGRVLQLTGEPYLVIGVLPPDFQPLRMSNP CCCCCCCCCCCEEEECCCHHHHHHCCCHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCC AEKPQIFMPAGYEPHRTALCRGCLDARAIARLRRGITLADARTDLNAAMREIVRQYPADF CCCCEEEECCCCCHHHHHHHHHHHHHHHHHHHHCCCEEEHHHHHHHHHHHHHHHHCCCCC APDISIRIAPLRDRMIAPILTPLYVLSAAVCALLLIACANLTSLLLARVTARSPELALRA CCCCEEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHH ALGAGRARIAAHLLTESLILSLAGGAAGALLAWPAIAILTSLAPRELPRLDEIHLDSSVL HHCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCHHHCCCCCHHCCCCHHH LFALGASLFAGLSVAIVPAWRAVRIDLNRELKRPARGGLRNLLVVAEIAMAFVLGVGAAL HHHHHHHHHHCCCEEEECCCEEEEEECCHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHH LGKSLLRLTAVDSGFDPHHILTLTLSLSPNRYRTQDGARQYYRQVEQNLRAVPGVLDIGL HHHHHHHHHHHCCCCCCCEEEEEEEEECCCCCCCHHHHHHHHHHHHHHHHHCCCEEEECC VDNVPLSHTIPVKFRLSAGDTSASAADLFRASPGYFRVLKIPLRRGRLFTGQDGVTGPPT CCCCCCCCCCCEEEEECCCCCCCHHHHHHHCCCCEEEEEEEEHHCCCEEECCCCCCCCCE VIVSESFARSQFPGTDPIGQSIQLGPVNEHRPWLTIAGVVGDVRQEGLDRAPDQAIYIPQ EEEECHHHHCCCCCCCCCCCCEEECCCCCCCCCEEEHHHHHHHHHHCCCCCCCCEEECCC AADPLDYIRLLVRTTGDPLRSERGIRNAVRLADPDQPVFHVQPMDDYVASSLADRTFTLT CCCHHHHHHHHHHCCCCHHHHHCCHHHHHHCCCCCCCEEEECCHHHHHHHHHHCHHHHHH LISLFGSIALLLAAIGIYGVISHTVGLRTRELGIRMALGAARSTVVRMILRDVLILLVSG HHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LTAGVLAALALTRFLSHLLFEVRPTDITTAAGVALLLACVALLAASLPTLRAAAIDPNLA HHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHCCCCCC LRSE CCCC >Mature Secondary Structure MDFRIALRTLCRYPAFTALAVVTLALGIASTTAIFSVVKAVLLTQLPYRDPDRVMALSQV CCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHH GEWTAHELPTRTQSIESISLYGDTQRTLVDNGDPEVLRGLRVTHEFFETLGATMALGRTF CCHHHHHCCCHHHCCCEEEEECCCCHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCC TPAEDRWPRANVVILNHPLWVRRFASDPRIVGRVLQLTGEPYLVIGVLPPDFQPLRMSNP CCCCCCCCCCCEEEECCCHHHHHHCCCHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCC AEKPQIFMPAGYEPHRTALCRGCLDARAIARLRRGITLADARTDLNAAMREIVRQYPADF CCCCEEEECCCCCHHHHHHHHHHHHHHHHHHHHCCCEEEHHHHHHHHHHHHHHHHCCCCC APDISIRIAPLRDRMIAPILTPLYVLSAAVCALLLIACANLTSLLLARVTARSPELALRA CCCCEEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHH ALGAGRARIAAHLLTESLILSLAGGAAGALLAWPAIAILTSLAPRELPRLDEIHLDSSVL HHCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCHHHCCCCCHHCCCCHHH LFALGASLFAGLSVAIVPAWRAVRIDLNRELKRPARGGLRNLLVVAEIAMAFVLGVGAAL HHHHHHHHHHCCCEEEECCCEEEEEECCHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHH LGKSLLRLTAVDSGFDPHHILTLTLSLSPNRYRTQDGARQYYRQVEQNLRAVPGVLDIGL HHHHHHHHHHHCCCCCCCEEEEEEEEECCCCCCCHHHHHHHHHHHHHHHHHCCCEEEECC VDNVPLSHTIPVKFRLSAGDTSASAADLFRASPGYFRVLKIPLRRGRLFTGQDGVTGPPT CCCCCCCCCCCEEEEECCCCCCCHHHHHHHCCCCEEEEEEEEHHCCCEEECCCCCCCCCE VIVSESFARSQFPGTDPIGQSIQLGPVNEHRPWLTIAGVVGDVRQEGLDRAPDQAIYIPQ EEEECHHHHCCCCCCCCCCCCEEECCCCCCCCCEEEHHHHHHHHHHCCCCCCCCEEECCC AADPLDYIRLLVRTTGDPLRSERGIRNAVRLADPDQPVFHVQPMDDYVASSLADRTFTLT CCCHHHHHHHHHHCCCCHHHHHCCHHHHHHCCCCCCCEEEECCHHHHHHHHHHCHHHHHH LISLFGSIALLLAAIGIYGVISHTVGLRTRELGIRMALGAARSTVVRMILRDVLILLVSG HHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LTAGVLAALALTRFLSHLLFEVRPTDITTAAGVALLLACVALLAASLPTLRAAAIDPNLA HHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHCCCCCC LRSE CCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: NA