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The map label for this gene is yloC [H]

Identifier: 116621472

GI number: 116621472

Start: 2999950

End: 3000828

Strand: Reverse

Name: yloC [H]

Synonym: Acid_2354

Alternate gene names: 116621472

Gene position: 3000828-2999950 (Counterclockwise)

Preceding gene: 116621473

Following gene: 116621471

Centisome position: 30.11

GC content: 65.42

Gene sequence:

>879_bases
ATGACGGGCTTTGCCCGCGTCCGAAGAGAGATTCCCCAAGGCGAGCTCGTTTTCAGCCTGAAGAGCGTCAACCATCGCGG
CCTGGACCTGCACTTCCACATGCCCAATGAGCTCGACGCCCTCGAAAACGACGTGCGCGCCGTGATCAAGACCGGCGTCG
CGCGCGGGCATCTCCAGATCCATTGCGGCATCACCCGGACCGCGGCCGCGGGCGCCGCGCCCCTGAATCGCACGCTCCTC
ACCGCGTATATGGCGGCTTTCCGCGAGGCCGCGGAAGTCTACGAACTCGAGGGCAGCCCCGATCTCAACAGCGCCTTACG
CATTCCGGGGATGCTCACTACCGGCGAGGAGGAGGAACTCGGCGAAGATGTCGCCAAGGCGCTGCTCGCCGCTGCCGCCG
ATGCCGTGGCCGCCCTGAACAAGGTCCGCGAACGTGAAGGCGCCGCCACCGCCGAGGAAATGCGCCAGCGCTGCCGCAGC
ATCTGCTCACTCGTGGTGCGTATGGAAGAGATCCGCGCCGGAGCCGTCGGCGTCTTCCAGAAGCGCCTGCGCGAAAAGCT
CGCCGACCTGCTCCATGGGGCCGGAATCGAACCCCAGCGCCTCGCCCAGGAGGCCGCCATCCTCGCCGACCGCAGCGATA
TCTCGGAAGAGCTGATGCGCCTTCGCACCCACGCCGGCCAGTTGGAGCAGATGCTCAACGGCGATGGCGAAGTCGGCAAG
CGCCTGGATTTCCTCCTCCAGGAGATGAACCGCGAGTCGAACACGGTGCTCTCCAAAACCGGCGGCCTCGGCGATCTCGG
CCTCACTATCACCGACCTTGCTCTCAGCGCCAAGTCGGAAATCGATAAGATCAGGGAGCAGAGCCTCAACCTCGAGTAG

Upstream 100 bases:

>100_bases
CGCACGAAGAACTCGTGTCTCGTGGTGGAATATATCAGCGCCTCCACGAACTCCAGTTCGAGGACGCCGGAACGGTGGTA
GACCTTTGAGCGTACGCAGC

Downstream 100 bases:

>100_bases
CGATTCTCCATGCACACGACCACCGTCTACATCATTTCCGCCCCTTCCGGCTCCGGCAAATCGACGCTGGTCGCACGCCT
GCTCGAGTCCGTTCCGAACC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 292; Mature: 291

Protein sequence:

>292_residues
MTGFARVRREIPQGELVFSLKSVNHRGLDLHFHMPNELDALENDVRAVIKTGVARGHLQIHCGITRTAAAGAAPLNRTLL
TAYMAAFREAAEVYELEGSPDLNSALRIPGMLTTGEEEELGEDVAKALLAAAADAVAALNKVREREGAATAEEMRQRCRS
ICSLVVRMEEIRAGAVGVFQKRLREKLADLLHGAGIEPQRLAQEAAILADRSDISEELMRLRTHAGQLEQMLNGDGEVGK
RLDFLLQEMNRESNTVLSKTGGLGDLGLTITDLALSAKSEIDKIREQSLNLE

Sequences:

>Translated_292_residues
MTGFARVRREIPQGELVFSLKSVNHRGLDLHFHMPNELDALENDVRAVIKTGVARGHLQIHCGITRTAAAGAAPLNRTLL
TAYMAAFREAAEVYELEGSPDLNSALRIPGMLTTGEEEELGEDVAKALLAAAADAVAALNKVREREGAATAEEMRQRCRS
ICSLVVRMEEIRAGAVGVFQKRLREKLADLLHGAGIEPQRLAQEAAILADRSDISEELMRLRTHAGQLEQMLNGDGEVGK
RLDFLLQEMNRESNTVLSKTGGLGDLGLTITDLALSAKSEIDKIREQSLNLE
>Mature_291_residues
TGFARVRREIPQGELVFSLKSVNHRGLDLHFHMPNELDALENDVRAVIKTGVARGHLQIHCGITRTAAAGAAPLNRTLLT
AYMAAFREAAEVYELEGSPDLNSALRIPGMLTTGEEEELGEDVAKALLAAAADAVAALNKVREREGAATAEEMRQRCRSI
CSLVVRMEEIRAGAVGVFQKRLREKLADLLHGAGIEPQRLAQEAAILADRSDISEELMRLRTHAGQLEQMLNGDGEVGKR
LDFLLQEMNRESNTVLSKTGGLGDLGLTITDLALSAKSEIDKIREQSLNLE

Specific function: Unknown

COG id: COG1561

COG function: function code S; Uncharacterized stress-induced protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0701 family [H]

Homologues:

Organism=Escherichia coli, GI1790075, Length=300, Percent_Identity=33, Blast_Score=113, Evalue=1e-26,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005229
- InterPro:   IPR013551
- InterPro:   IPR013527 [H]

Pfam domain/function: PF08340 DUF1732; PF03755 YicC_N [H]

EC number: NA

Molecular weight: Translated: 31841; Mature: 31710

Theoretical pI: Translated: 5.30; Mature: 5.30

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTGFARVRREIPQGELVFSLKSVNHRGLDLHFHMPNELDALENDVRAVIKTGVARGHLQI
CCCHHHHHHHCCCCCEEEEHHHCCCCCCEEEEECCCHHHHHHHHHHHHHHHHHCCCEEEE
HCGITRTAAAGAAPLNRTLLTAYMAAFREAAEVYELEGSPDLNSALRIPGMLTTGEEEEL
EECCHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHCCCCCCCCCCHHHH
GEDVAKALLAAAADAVAALNKVREREGAATAEEMRQRCRSICSLVVRMEEIRAGAVGVFQ
HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
KRLREKLADLLHGAGIEPQRLAQEAAILADRSDISEELMRLRTHAGQLEQMLNGDGEVGK
HHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHH
RLDFLLQEMNRESNTVLSKTGGLGDLGLTITDLALSAKSEIDKIREQSLNLE
HHHHHHHHHCCCCCHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure 
TGFARVRREIPQGELVFSLKSVNHRGLDLHFHMPNELDALENDVRAVIKTGVARGHLQI
CCHHHHHHHCCCCCEEEEHHHCCCCCCEEEEECCCHHHHHHHHHHHHHHHHHCCCEEEE
HCGITRTAAAGAAPLNRTLLTAYMAAFREAAEVYELEGSPDLNSALRIPGMLTTGEEEEL
EECCHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHCCCCCCCCCCHHHH
GEDVAKALLAAAADAVAALNKVREREGAATAEEMRQRCRSICSLVVRMEEIRAGAVGVFQ
HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
KRLREKLADLLHGAGIEPQRLAQEAAILADRSDISEELMRLRTHAGQLEQMLNGDGEVGK
HHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHH
RLDFLLQEMNRESNTVLSKTGGLGDLGLTITDLALSAKSEIDKIREQSLNLE
HHHHHHHHHCCCCCHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9534248; 9384377 [H]