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The map label for this gene is 116621468

Identifier: 116621468

GI number: 116621468

Start: 2997064

End: 2997798

Strand: Reverse

Name: 116621468

Synonym: Acid_2350

Alternate gene names: NA

Gene position: 2997798-2997064 (Counterclockwise)

Preceding gene: 116621469

Following gene: 116621466

Centisome position: 30.08

GC content: 62.04

Gene sequence:

>735_bases
ATGGACGCTGACTCTCTCCGCCAATATCTCGAGTTCTACCAGGATCTGCACATACAGACCCTCTACCGCCGCACCGCGCC
GCCCGTAGCCGCGGTGACGCCGGCACCCATCGCCCTCGCAGCGCCCGAACCCAAAATGGAACTGCCTCCTCTCGCTCCGC
CCAACGATTCGCTCCTTAAGATCATCCAGGACATTGGCGATTGCCACCGCTGCAAACTCGGCGACGCGCGCAACAAAATC
GTCTTCGGCGTGGGCGACGAAAAGGCCCAACTGGTCTTCGTCGGCGAAGGACCCGGCGCCGATGAAGACGAGCAGGGCAT
CCCCTTCGTCGGCCGCGCCGGCCAGCTGCTCACGCAGATGATCGAGAACACCTCGAAGAAGGAAGGCATACCGCTCAAAC
GCGGCGACGTCTACATCTGCAACGTCGTCAAATGCCGCCCGCCCGGAAACCGCACCCCCGAGCCCGAGGAAATGGAGATC
TGCGGCGAGTTCCTCTACCGCCAGCTTTCCACCATACGCCCGAAGGCGATCTGCGCTCTCGGCGGCACCGCCGCGCGCGC
CGTCACCGGCCACAAGGAAGGCGTCACCAAAATGCGCGGCAAGTGGTTTAAGTGGCAGGATATTCCGGTGATGGTGACCT
ATCACCCGTCCTATTTGCTGCGCCCGTTCAACGAAAACGCCAAGCGCGAAGCCTGGGAAGACCTCAAGAAAGTCCTCCAC
TTCGTCTACGACTGA

Upstream 100 bases:

>100_bases
CAGGGCGAACCGATCCAGATTCCCCGCGCCTCCAAGCGCCACATCGCGGACCGCATCTTCGACGAAATCCTGGCCCTGCG
CCTGACCCTACACGCCACCG

Downstream 100 bases:

>100_bases
TCACCTTCACAGCCCGAGCCCTAGTCCCTTGTGTCGCCCCCACCGCGAACCGCGACGGTCAGGGAGCGATCTACACTCTC
TTCCCTGCTCCACGCCAACC

Product: phage SPO1 DNA polymerase-like protein

Products: diphosphate; DNAn+1

Alternate protein names: Uracil-DNA Glycosylase; Phage SPO1 DNA Polymerase-Like Protein; DNA Polymerase; DNA Polymerase Bacteriophage-Type; Uracil DNA Glycosylase Superfamily Protein; DNA-Directed DNA Polymerase; DNA Polymerase-Related Protein Bacteriophage-Type; Phage Spo1 DNA Polymerase-Related Protein; DNA Polymerase-Related Protein; Uracil-DNA Glycosylase Family 4 Protein; Bacteriophage-Related DNA Polymerase; Bacteriophage-Type DNA Polymerase N-Terminal Domain Protein; Phage SPO1 DNA Polymerase Domain-Containing Protein; DNA Polymerase Domain-Containing Protein; Phage Related DNA Polymerase; DNA Glycosylase; Phage SpO1 DNA Polymerase-Related Protein; Bacteriophage-Type DNA Polymerase; DNA Polymerase Related Protein; Uracil DNA Glycosylase; DNA-Directed DNA Polymerase Bacteriophage-Type; Uracil-DNA Glycosylase Phage-Related Protein; Uracil-DNA Glycosylase Superfamily Protein; Phage Shock Protein E; C-Terminal Part Of DNA Polymerase Bacteriophage-Type; Phage DNA Polymerase; Phage Spo1 DNA Polymerase Domain Protein; Uracil-DNA Glycosylase-Like Protein; Uracil-DNA Glycosylase-Related Protein; N-Terminus Of Phage SPO1 DNA Polymerase

Number of amino acids: Translated: 244; Mature: 244

Protein sequence:

>244_residues
MDADSLRQYLEFYQDLHIQTLYRRTAPPVAAVTPAPIALAAPEPKMELPPLAPPNDSLLKIIQDIGDCHRCKLGDARNKI
VFGVGDEKAQLVFVGEGPGADEDEQGIPFVGRAGQLLTQMIENTSKKEGIPLKRGDVYICNVVKCRPPGNRTPEPEEMEI
CGEFLYRQLSTIRPKAICALGGTAARAVTGHKEGVTKMRGKWFKWQDIPVMVTYHPSYLLRPFNENAKREAWEDLKKVLH
FVYD

Sequences:

>Translated_244_residues
MDADSLRQYLEFYQDLHIQTLYRRTAPPVAAVTPAPIALAAPEPKMELPPLAPPNDSLLKIIQDIGDCHRCKLGDARNKI
VFGVGDEKAQLVFVGEGPGADEDEQGIPFVGRAGQLLTQMIENTSKKEGIPLKRGDVYICNVVKCRPPGNRTPEPEEMEI
CGEFLYRQLSTIRPKAICALGGTAARAVTGHKEGVTKMRGKWFKWQDIPVMVTYHPSYLLRPFNENAKREAWEDLKKVLH
FVYD
>Mature_244_residues
MDADSLRQYLEFYQDLHIQTLYRRTAPPVAAVTPAPIALAAPEPKMELPPLAPPNDSLLKIIQDIGDCHRCKLGDARNKI
VFGVGDEKAQLVFVGEGPGADEDEQGIPFVGRAGQLLTQMIENTSKKEGIPLKRGDVYICNVVKCRPPGNRTPEPEEMEI
CGEFLYRQLSTIRPKAICALGGTAARAVTGHKEGVTKMRGKWFKWQDIPVMVTYHPSYLLRPFNENAKREAWEDLKKVLH
FVYD

Specific function: Unknown

COG id: COG1573

COG function: function code L; Uracil-DNA glycosylase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: 2.7.7.7

Molecular weight: Translated: 27328; Mature: 27328

Theoretical pI: Translated: 7.42; Mature: 7.42

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.5 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
4.9 %Cys+Met (Translated Protein)
2.5 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
4.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDADSLRQYLEFYQDLHIQTLYRRTAPPVAAVTPAPIALAAPEPKMELPPLAPPNDSLLK
CCHHHHHHHHHHHHHHHHHHHHHHCCCCEEECCCCCEEEECCCCCCCCCCCCCCCHHHHH
IIQDIGDCHRCKLGDARNKIVFGVGDEKAQLVFVGEGPGADEDEQGIPFVGRAGQLLTQM
HHHHHCHHHHCCCCCCCCEEEEEECCCCEEEEEEECCCCCCCCCCCCCCCCHHHHHHHHH
IENTSKKEGIPLKRGDVYICNVVKCRPPGNRTPEPEEMEICGEFLYRQLSTIRPKAICAL
HHCCCHHCCCCCCCCCEEEEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHCCCHHEEEE
GGTAARAVTGHKEGVTKMRGKWFKWQDIPVMVTYHPSYLLRPFNENAKREAWEDLKKVLH
CCCHHHHHCCCHHHHHHHCCCCEEECCCCEEEEECCHHEECCCCCCHHHHHHHHHHHHHH
FVYD
HHCC
>Mature Secondary Structure
MDADSLRQYLEFYQDLHIQTLYRRTAPPVAAVTPAPIALAAPEPKMELPPLAPPNDSLLK
CCHHHHHHHHHHHHHHHHHHHHHHCCCCEEECCCCCEEEECCCCCCCCCCCCCCCHHHHH
IIQDIGDCHRCKLGDARNKIVFGVGDEKAQLVFVGEGPGADEDEQGIPFVGRAGQLLTQM
HHHHHCHHHHCCCCCCCCEEEEEECCCCEEEEEEECCCCCCCCCCCCCCCCHHHHHHHHH
IENTSKKEGIPLKRGDVYICNVVKCRPPGNRTPEPEEMEICGEFLYRQLSTIRPKAICAL
HHCCCHHCCCCCCCCCEEEEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHCCCHHEEEE
GGTAARAVTGHKEGVTKMRGKWFKWQDIPVMVTYHPSYLLRPFNENAKREAWEDLKKVLH
CCCHHHHHCCCHHHHHHHCCCCEEECCCCEEEEECCHHEECCCCCCHHHHHHHHHHHHHH
FVYD
HHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: deoxynucleoside triphosphate; DNAn

Specific reaction: deoxynucleoside triphosphate + DNA(n) = diphosphate + DNA(n+1)

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA