| Definition | Candidatus Solibacter usitatus Ellin6076 chromosome, complete genome. |
|---|---|
| Accession | NC_008536 |
| Length | 9,965,640 |
Click here to switch to the map view.
The map label for this gene is 116621459
Identifier: 116621459
GI number: 116621459
Start: 2985012
End: 2987450
Strand: Reverse
Name: 116621459
Synonym: Acid_2341
Alternate gene names: NA
Gene position: 2987450-2985012 (Counterclockwise)
Preceding gene: 116621463
Following gene: 116621455
Centisome position: 29.98
GC content: 62.81
Gene sequence:
>2439_bases ATGAAATTCGATAGAACCGAGCCGAAGTGTGTTTGTGCGTCTCAAGATGCCGCCGGACAGCGGGACGTCGCTCCCCAAAT GAACCCGGCCGCCCCGCCCCGGGCCATGCACGCGGGCGCCAAACGAACCCGGGAGTCCCACTGCGAGCCCTGTCTCCGCA TGCTGGGCGAACCCGGAAATAACCCTGAATCCGAAATGCGCGGGCGCCAAACGAACCCAAGCATCCCATCCTCTGCGATG CGCGCAGATACCAAACGAACCCAAGCCCTTCCCCTGTTGGCGGTCCTCCTCATAGGGTCCACGGTGCCGGCGATGGCAGC CTACCCGAACGGGTACAGTTTCTGTAAGGTGGTAACCACCCAGCACGGCATGGTCTCTGGTTCCAGTGACCTCGCGAATT ACCCGCTCACCGTCGCCCTCACGGATCCCGCCCTGAAGACCGCCTCCAACGGCGGCGGGGTCAATAATTCGAACGGCTAC GATATCGCCTTCTACCCGGATTGCTCCGGATCCGGAACGGCCCTCAAGTGGGAGCTCGAATCCTACTCTCCAACTACCGG CGCAATCGTGGCCCACGTCCTGCGCCCCACCCTCTCGCACACCACGGACGACACGATCGGCATGTACTACGGCGGCGCCT TCAACAGCTTCCAAAGTACGGCCGGCGCCGTATGGGAGAGCGGGTTCAGGGGCGTTTGGCACCTCCCGAACGGGTCCGTG CTGTCGTTGACCGATTCCACCGCCAACGCAAACAACACCACCAACAACGGCGCCGCCGCGGTGCCCGGCATAGTGGACGG CGGAGCAGGCGGCAGCGGTTCCCAGTGGGTCAACCTCGGGACCTCGTCCGCGCTGCAGCCAAACAGTGCGTTCACGCTTT CGGCCTGGGTGAAGCTGAATTCCCTGGCTTCGTACCCGGGCTTGATCACCTCTCCCTACCAGGCGAACACTGCCGCCGGC TATATTCTCGCGGTAGACACCACCGGCAGGCTGGCCCTCTATACCGACCCGAATGGAACCGGCACGGGCTACAATGTGGC TCTCTCCTCCAACACGATTTCCACCGGCGCCTGGTATTACGTCGCCGCCACATGGGATGGCAGCACGCAGCGCTTGTATT TCAACGGAGTTCCTGACGGCGCCCATGCCGCTGCATCAGTGAATTACGGCGCCGTGGTCGCTCCTGGCAGATTGCTGTCG TACCCCAACCAGAATGCCAACGGGTCGATCGATGAAGTCCGTATCTCCGGCGTCGCCCGCTCACCGGACTGGATCCTCAC CGAATACCGCAATCAGAGCTCTCCCTCCACTTACATCTCCGTTGGCCCCCAGCTGACTTCGATCGGTTACTCGAACGGAT ACAGTTACTGCAAAGTCGTCACCACCTTGCACACGATGGTCTCCGGCTCGAACGATCTTGCCAACTACCCGCTCACCGTC AGCCTCACCGACGCCGATCTTAAGACCGCGGCCAACGGCGGCCTGGTCAACAACAGCAACGGCTACGACATCGGTTTCTA CCAGGACTGCTCCGGCGCGGGCGCCCCTCTGAACTGGGAGGTGGAGTCCTACTCTCCCGCCACCGGCGCGCTGGTCGCCC ACGTTCTGCGGCCCGCCCTCTCGCACACGGCCGATGACACGATCGGCATGTACTACGGCGGCGCGTTCAGCAACTTCCAG AGCACCCCAGGCGCCGTGTGGGATGCGAACTATAAACTGGTCTGGCACGCCGCAAACGACGGCGGCCTGGTCCTGACCGA CTCCACGTCCAACGCCAATCCGATTACCAACCACAACGCCGTGGCTGCCGTGGCCGGCAAGATCGGCGGCGGCGCCGGAT TCGCGTCGGGCTCCGCTCAATATCTCGATTTCGGCAGTTCCACCGGCCTCAATCCGGCGAACCTGACCGTCGAAGCCTGG GTAAACTACACTTCCGTAGCCAGCCCCGATGGCTACAATTCCGTGTTCGACCGCGAACATGCCGCGTTTGCCGCCGGCGA TTACTCGCTGCTCATCAAGAACAACGGGAAGATGGCGTACTACCTGAAGGATGCGGCGGGCGCCATGGTAGGCATCGACG GAACCGGCGCAAACACGCTCTCCCCGGGCAACTGGAACCACCTCGTGATGACCTACTCCGCCGGCGGATCGCTGACCGGA TACGTAAATGGCTCGCAGGATGCCGCCACCGCGGCCACGGCCAACGGCCTAAGCAACGGGAGTTCGATCCCCGCGCAGAC CTCATTCTATTCGGCAGGGTTCCCGCGGTACCTGAACGCATCGGTGGACGAAATCCGCGTTTCCAGCATCGCCCGCTCGG CGGATTGGGTGCTCACCGAATTTCGGAATCAGAGTGCTCCCGCCAGTTACCTCTCGGTGGGACCGAGACTCTCCGTAGGC ACGGTCCGCATCCGGCATTCCGTCAAGACCGACCAGTAG
Upstream 100 bases:
>100_bases AACAACTTGCCAGTTTCAACCCCCTTGACACGAAAATCGCCATGTTAATTTCCGGTCAGCGTAATACTGGTCGCCAAGCC CAGTCAGAAAGTGACCCCAA
Downstream 100 bases:
>100_bases GGAAAAGGCGCCGGAGGCGGGCGGGTTCCACTCTCCCGCCTCCCGGCCCGCTACACCTGATGCTCTTCCACCGAATGGAC CACGTAGTTCGGACGGCGGC
Product: LamG domain-containing protein
Products: NA
Alternate protein names: MotA/lQ/ExbB Proton Channel
Number of amino acids: Translated: 812; Mature: 812
Protein sequence:
>812_residues MKFDRTEPKCVCASQDAAGQRDVAPQMNPAAPPRAMHAGAKRTRESHCEPCLRMLGEPGNNPESEMRGRQTNPSIPSSAM RADTKRTQALPLLAVLLIGSTVPAMAAYPNGYSFCKVVTTQHGMVSGSSDLANYPLTVALTDPALKTASNGGGVNNSNGY DIAFYPDCSGSGTALKWELESYSPTTGAIVAHVLRPTLSHTTDDTIGMYYGGAFNSFQSTAGAVWESGFRGVWHLPNGSV LSLTDSTANANNTTNNGAAAVPGIVDGGAGGSGSQWVNLGTSSALQPNSAFTLSAWVKLNSLASYPGLITSPYQANTAAG YILAVDTTGRLALYTDPNGTGTGYNVALSSNTISTGAWYYVAATWDGSTQRLYFNGVPDGAHAAASVNYGAVVAPGRLLS YPNQNANGSIDEVRISGVARSPDWILTEYRNQSSPSTYISVGPQLTSIGYSNGYSYCKVVTTLHTMVSGSNDLANYPLTV SLTDADLKTAANGGLVNNSNGYDIGFYQDCSGAGAPLNWEVESYSPATGALVAHVLRPALSHTADDTIGMYYGGAFSNFQ STPGAVWDANYKLVWHAANDGGLVLTDSTSNANPITNHNAVAAVAGKIGGGAGFASGSAQYLDFGSSTGLNPANLTVEAW VNYTSVASPDGYNSVFDREHAAFAAGDYSLLIKNNGKMAYYLKDAAGAMVGIDGTGANTLSPGNWNHLVMTYSAGGSLTG YVNGSQDAATAATANGLSNGSSIPAQTSFYSAGFPRYLNASVDEIRVSSIARSADWVLTEFRNQSAPASYLSVGPRLSVG TVRIRHSVKTDQ
Sequences:
>Translated_812_residues MKFDRTEPKCVCASQDAAGQRDVAPQMNPAAPPRAMHAGAKRTRESHCEPCLRMLGEPGNNPESEMRGRQTNPSIPSSAM RADTKRTQALPLLAVLLIGSTVPAMAAYPNGYSFCKVVTTQHGMVSGSSDLANYPLTVALTDPALKTASNGGGVNNSNGY DIAFYPDCSGSGTALKWELESYSPTTGAIVAHVLRPTLSHTTDDTIGMYYGGAFNSFQSTAGAVWESGFRGVWHLPNGSV LSLTDSTANANNTTNNGAAAVPGIVDGGAGGSGSQWVNLGTSSALQPNSAFTLSAWVKLNSLASYPGLITSPYQANTAAG YILAVDTTGRLALYTDPNGTGTGYNVALSSNTISTGAWYYVAATWDGSTQRLYFNGVPDGAHAAASVNYGAVVAPGRLLS YPNQNANGSIDEVRISGVARSPDWILTEYRNQSSPSTYISVGPQLTSIGYSNGYSYCKVVTTLHTMVSGSNDLANYPLTV SLTDADLKTAANGGLVNNSNGYDIGFYQDCSGAGAPLNWEVESYSPATGALVAHVLRPALSHTADDTIGMYYGGAFSNFQ STPGAVWDANYKLVWHAANDGGLVLTDSTSNANPITNHNAVAAVAGKIGGGAGFASGSAQYLDFGSSTGLNPANLTVEAW VNYTSVASPDGYNSVFDREHAAFAAGDYSLLIKNNGKMAYYLKDAAGAMVGIDGTGANTLSPGNWNHLVMTYSAGGSLTG YVNGSQDAATAATANGLSNGSSIPAQTSFYSAGFPRYLNASVDEIRVSSIARSADWVLTEFRNQSAPASYLSVGPRLSVG TVRIRHSVKTDQ >Mature_812_residues MKFDRTEPKCVCASQDAAGQRDVAPQMNPAAPPRAMHAGAKRTRESHCEPCLRMLGEPGNNPESEMRGRQTNPSIPSSAM RADTKRTQALPLLAVLLIGSTVPAMAAYPNGYSFCKVVTTQHGMVSGSSDLANYPLTVALTDPALKTASNGGGVNNSNGY DIAFYPDCSGSGTALKWELESYSPTTGAIVAHVLRPTLSHTTDDTIGMYYGGAFNSFQSTAGAVWESGFRGVWHLPNGSV LSLTDSTANANNTTNNGAAAVPGIVDGGAGGSGSQWVNLGTSSALQPNSAFTLSAWVKLNSLASYPGLITSPYQANTAAG YILAVDTTGRLALYTDPNGTGTGYNVALSSNTISTGAWYYVAATWDGSTQRLYFNGVPDGAHAAASVNYGAVVAPGRLLS YPNQNANGSIDEVRISGVARSPDWILTEYRNQSSPSTYISVGPQLTSIGYSNGYSYCKVVTTLHTMVSGSNDLANYPLTV SLTDADLKTAANGGLVNNSNGYDIGFYQDCSGAGAPLNWEVESYSPATGALVAHVLRPALSHTADDTIGMYYGGAFSNFQ STPGAVWDANYKLVWHAANDGGLVLTDSTSNANPITNHNAVAAVAGKIGGGAGFASGSAQYLDFGSSTGLNPANLTVEAW VNYTSVASPDGYNSVFDREHAAFAAGDYSLLIKNNGKMAYYLKDAAGAMVGIDGTGANTLSPGNWNHLVMTYSAGGSLTG YVNGSQDAATAATANGLSNGSSIPAQTSFYSAGFPRYLNASVDEIRVSSIARSADWVLTEFRNQSAPASYLSVGPRLSVG TVRIRHSVKTDQ
Specific function: Unknown
COG id: COG5306
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 84509; Mature: 84509
Theoretical pI: Translated: 5.98; Mature: 5.98
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKFDRTEPKCVCASQDAAGQRDVAPQMNPAAPPRAMHAGAKRTRESHCEPCLRMLGEPGN CCCCCCCCCEEEECCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCC NPESEMRGRQTNPSIPSSAMRADTKRTQALPLLAVLLIGSTVPAMAAYPNGYSFCKVVTT CCHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCHHEECCCCCEEEEEEEE QHGMVSGSSDLANYPLTVALTDPALKTASNGGGVNNSNGYDIAFYPDCSGSGTALKWELE CCCEECCCCCCCCCCEEEEEECCCHHCCCCCCCCCCCCCEEEEEECCCCCCCCEEEEEEC SYSPTTGAIVAHVLRPTLSHTTDDTIGMYYGGAFNSFQSTAGAVWESGFRGVWHLPNGSV CCCCCHHHHHHHHHHHHHHCCCCCCEEEEECCCHHHHHHHHHHHHHCCCCEEEECCCCCE LSLTDSTANANNTTNNGAAAVPGIVDGGAGGSGSQWVNLGTSSALQPNSAFTLSAWVKLN EEEECCCCCCCCCCCCCCEECCCEEECCCCCCCCCEEECCCCCCCCCCCCEEEEEEEEEC SLASYPGLITSPYQANTAAGYILAVDTTGRLALYTDPNGTGTGYNVALSSNTISTGAWYY CHHCCCCCEECCCCCCCCCEEEEEEECCCCEEEEECCCCCCCCEEEEEECCEECCCEEEE VAATWDGSTQRLYFNGVPDGAHAAASVNYGAVVAPGRLLSYPNQNANGSIDEVRISGVAR EEEEECCCCEEEEEECCCCCCCCEEECCCCEEECCCHHEECCCCCCCCCCEEEEEEEECC SPDWILTEYRNQSSPSTYISVGPQLTSIGYSNGYSYCKVVTTLHTMVSGSNDLANYPLTV CCCEEEEECCCCCCCCEEEEECCEEEEEECCCCCHHHHHHHHHHHHHCCCCCCCCCCEEE SLTDADLKTAANGGLVNNSNGYDIGFYQDCSGAGAPLNWEVESYSPATGALVAHVLRPAL EEECCCHHHCCCCCEEECCCCCEEEEEECCCCCCCCEEEEECCCCCHHHHHHHHHHHHHH SHTADDTIGMYYGGAFSNFQSTPGAVWDANYKLVWHAANDGGLVLTDSTSNANPITNHNA HHCCCCCEEEEECCCCCCCCCCCCCEEECCEEEEEEECCCCCEEEECCCCCCCCCCCCCE VAAVAGKIGGGAGFASGSAQYLDFGSSTGLNPANLTVEAWVNYTSVASPDGYNSVFDREH EEEEECCCCCCCCCCCCCCEEEECCCCCCCCCCCEEEEEEECEEECCCCCCCCHHHCCCC AAFAAGDYSLLIKNNGKMAYYLKDAAGAMVGIDGTGANTLSPGNWNHLVMTYSAGGSLTG CEEECCCEEEEEECCCCEEEEEECCCCEEEEECCCCCCCCCCCCCCEEEEEEECCCCEEE YVNGSQDAATAATANGLSNGSSIPAQTSFYSAGFPRYLNASVDEIRVSSIARSADWVLTE EECCCCCHHHHHHHCCCCCCCCCCCCCCEECCCCCHHHCCCHHHHHHHHHHHHHHHHHHH FRNQSAPASYLSVGPRLSVGTVRIRHSVKTDQ HCCCCCCHHHHHCCCCEEEEEEEEEECCCCCC >Mature Secondary Structure MKFDRTEPKCVCASQDAAGQRDVAPQMNPAAPPRAMHAGAKRTRESHCEPCLRMLGEPGN CCCCCCCCCEEEECCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCC NPESEMRGRQTNPSIPSSAMRADTKRTQALPLLAVLLIGSTVPAMAAYPNGYSFCKVVTT CCHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCHHEECCCCCEEEEEEEE QHGMVSGSSDLANYPLTVALTDPALKTASNGGGVNNSNGYDIAFYPDCSGSGTALKWELE CCCEECCCCCCCCCCEEEEEECCCHHCCCCCCCCCCCCCEEEEEECCCCCCCCEEEEEEC SYSPTTGAIVAHVLRPTLSHTTDDTIGMYYGGAFNSFQSTAGAVWESGFRGVWHLPNGSV CCCCCHHHHHHHHHHHHHHCCCCCCEEEEECCCHHHHHHHHHHHHHCCCCEEEECCCCCE LSLTDSTANANNTTNNGAAAVPGIVDGGAGGSGSQWVNLGTSSALQPNSAFTLSAWVKLN EEEECCCCCCCCCCCCCCEECCCEEECCCCCCCCCEEECCCCCCCCCCCCEEEEEEEEEC SLASYPGLITSPYQANTAAGYILAVDTTGRLALYTDPNGTGTGYNVALSSNTISTGAWYY CHHCCCCCEECCCCCCCCCEEEEEEECCCCEEEEECCCCCCCCEEEEEECCEECCCEEEE VAATWDGSTQRLYFNGVPDGAHAAASVNYGAVVAPGRLLSYPNQNANGSIDEVRISGVAR EEEEECCCCEEEEEECCCCCCCCEEECCCCEEECCCHHEECCCCCCCCCCEEEEEEEECC SPDWILTEYRNQSSPSTYISVGPQLTSIGYSNGYSYCKVVTTLHTMVSGSNDLANYPLTV CCCEEEEECCCCCCCCEEEEECCEEEEEECCCCCHHHHHHHHHHHHHCCCCCCCCCCEEE SLTDADLKTAANGGLVNNSNGYDIGFYQDCSGAGAPLNWEVESYSPATGALVAHVLRPAL EEECCCHHHCCCCCEEECCCCCEEEEEECCCCCCCCEEEEECCCCCHHHHHHHHHHHHHH SHTADDTIGMYYGGAFSNFQSTPGAVWDANYKLVWHAANDGGLVLTDSTSNANPITNHNA HHCCCCCEEEEECCCCCCCCCCCCCEEECCEEEEEEECCCCCEEEECCCCCCCCCCCCCE VAAVAGKIGGGAGFASGSAQYLDFGSSTGLNPANLTVEAWVNYTSVASPDGYNSVFDREH EEEEECCCCCCCCCCCCCCEEEECCCCCCCCCCCEEEEEEECEEECCCCCCCCHHHCCCC AAFAAGDYSLLIKNNGKMAYYLKDAAGAMVGIDGTGANTLSPGNWNHLVMTYSAGGSLTG CEEECCCEEEEEECCCCEEEEEECCCCEEEEECCCCCCCCCCCCCCEEEEEEECCCCEEE YVNGSQDAATAATANGLSNGSSIPAQTSFYSAGFPRYLNASVDEIRVSSIARSADWVLTE EECCCCCHHHHHHHCCCCCCCCCCCCCCEECCCCCHHHCCCHHHHHHHHHHHHHHHHHHH FRNQSAPASYLSVGPRLSVGTVRIRHSVKTDQ HCCCCCCHHHHHCCCCEEEEEEEEEECCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA