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The map label for this gene is per1 [H]

Identifier: 116621403

GI number: 116621403

Start: 2919545

End: 2920390

Strand: Direct

Name: per1 [H]

Synonym: Acid_2285

Alternate gene names: 116621403

Gene position: 2919545-2920390 (Clockwise)

Preceding gene: 116621398

Following gene: 116621404

Centisome position: 29.3

GC content: 67.38

Gene sequence:

>846_bases
ATGCTCGCACTCCTCCTCCTCTTCTTCGCGCCCGGTCTTTCCACTCATTTCGCCGACCTCGCACGTCCCGCCGCCGGCAA
GGTCGGTGCATCCGTCCTCGTAATCGAAACCGGTGAGCGCGCGGGTTTCCATGCCCGCGACCCTTTCCCTATGCAGAGCG
TCTACAAGTTCCCGATCGCCATGGCGACCCTCCACCTGGTCGATACCGGGAAGCTCAAACTCGACCAGCCGGTCCCGATT
GCCAAAGCCGAACTCGCGCCGCCCGGCTTGCACAGCCCCATCCGCGACCAGCATCCCGAAGGCGCCACGCTCAGCCTCCG
CGAAGTGATCCGCTTCGCCGTCGCCGAGAGCGACGGCACCGCATCCGACGTGCTGCTGCGTCTCTCCGGCGGCCCATCGG
CCGTCACAGCCTACCTCCGCGGCCTCGGCATCAATGGCGTCATCGTCGCCACCTCCGAACTCGAAATGTCGCGCGGCCCC
ATGGTGCAATATCGCAACTGGGCGACGCCCGATTCCATGGTTGACCTGCTGCGCGCCTTCCACGCCGGCCGCGGCCTCTC
GCCCGCCGCCCGCACCCTGCTCGAGGACTTCATGGCGCAAAGTACCCCCGGACCCAAGCGCCTGAAGGGCCTGCTTCCCC
CCGGGACCCGCGTTGCGCACAAAACCGGAACCTCGGGCACCGACGGCGCTCTCACCCGCGCCACCAACGACGTCGGCATC
GTGACCCTCCCCAACGGACGCCACCTCGCCATCGCCGTCTTCGTCTCCGATTCCACGGCCTCGCTTGACCTCCGCGAAGA
GGCCATCGCGAAAATCGCCCGCGCCGCCTGGGATGCCTTTCAGTGA

Upstream 100 bases:

>100_bases
ACTAGGGCCTCTCTGCGGCTTGCTCCCGACATCGATTTATCGAGGACGCCGCGCTCGGGTTGCGGAAATGATTCTTCGAA
CTCAGCGAGAATAGGGAGCG

Downstream 100 bases:

>100_bases
TGTCTCCAAGGGAACACAGGACCTTCACGTGCTCGGTACAGGCCTCGTGAGGAAATTTCTTGCTGCCGCCCTGCTGCTGA
CGGCATCCGCCTTCGGCCAG

Product: beta-lactamase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 281; Mature: 281

Protein sequence:

>281_residues
MLALLLLFFAPGLSTHFADLARPAAGKVGASVLVIETGERAGFHARDPFPMQSVYKFPIAMATLHLVDTGKLKLDQPVPI
AKAELAPPGLHSPIRDQHPEGATLSLREVIRFAVAESDGTASDVLLRLSGGPSAVTAYLRGLGINGVIVATSELEMSRGP
MVQYRNWATPDSMVDLLRAFHAGRGLSPAARTLLEDFMAQSTPGPKRLKGLLPPGTRVAHKTGTSGTDGALTRATNDVGI
VTLPNGRHLAIAVFVSDSTASLDLREEAIAKIARAAWDAFQ

Sequences:

>Translated_281_residues
MLALLLLFFAPGLSTHFADLARPAAGKVGASVLVIETGERAGFHARDPFPMQSVYKFPIAMATLHLVDTGKLKLDQPVPI
AKAELAPPGLHSPIRDQHPEGATLSLREVIRFAVAESDGTASDVLLRLSGGPSAVTAYLRGLGINGVIVATSELEMSRGP
MVQYRNWATPDSMVDLLRAFHAGRGLSPAARTLLEDFMAQSTPGPKRLKGLLPPGTRVAHKTGTSGTDGALTRATNDVGI
VTLPNGRHLAIAVFVSDSTASLDLREEAIAKIARAAWDAFQ
>Mature_281_residues
MLALLLLFFAPGLSTHFADLARPAAGKVGASVLVIETGERAGFHARDPFPMQSVYKFPIAMATLHLVDTGKLKLDQPVPI
AKAELAPPGLHSPIRDQHPEGATLSLREVIRFAVAESDGTASDVLLRLSGGPSAVTAYLRGLGINGVIVATSELEMSRGP
MVQYRNWATPDSMVDLLRAFHAGRGLSPAARTLLEDFMAQSTPGPKRLKGLLPPGTRVAHKTGTSGTDGALTRATNDVGI
VTLPNGRHLAIAVFVSDSTASLDLREEAIAKIARAAWDAFQ

Specific function: Unknown

COG id: COG2367

COG function: function code V; Beta-lactamase class A

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the class-A beta-lactamase family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR012338
- InterPro:   IPR001466
- InterPro:   IPR000871 [H]

Pfam domain/function: PF00144 Beta-lactamase [H]

EC number: =3.5.2.6 [H]

Molecular weight: Translated: 29726; Mature: 29726

Theoretical pI: Translated: 9.53; Mature: 9.53

Prosite motif: PS00146 BETA_LACTAMASE_A

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLALLLLFFAPGLSTHFADLARPAAGKVGASVLVIETGERAGFHARDPFPMQSVYKFPIA
CHHHHHHHHCCCCHHHHHHHHCCCCCCCCCEEEEEECCCCCCCCCCCCCCHHHHHHHHHH
MATLHLVDTGKLKLDQPVPIAKAELAPPGLHSPIRDQHPEGATLSLREVIRFAVAESDGT
HHEEEEEECCCEEECCCCCCCHHCCCCCCCCCCCCCCCCCCCEEHHHHHHHHHHHCCCCC
ASDVLLRLSGGPSAVTAYLRGLGINGVIVATSELEMSRGPMVQYRNWATPDSMVDLLRAF
HHHEEEEECCCHHHHHHHHHHCCCCEEEEEECCHHCCCCCEEEECCCCCHHHHHHHHHHH
HAGRGLSPAARTLLEDFMAQSTPGPKRLKGLLPPGTRVAHKTGTSGTDGALTRATNDVGI
HCCCCCCHHHHHHHHHHHHHCCCCHHHHHCCCCCCCEEEECCCCCCCCCCEEECCCCEEE
VTLPNGRHLAIAVFVSDSTASLDLREEAIAKIARAAWDAFQ
EECCCCCEEEEEEEEECCCCCCHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MLALLLLFFAPGLSTHFADLARPAAGKVGASVLVIETGERAGFHARDPFPMQSVYKFPIA
CHHHHHHHHCCCCHHHHHHHHCCCCCCCCCEEEEEECCCCCCCCCCCCCCHHHHHHHHHH
MATLHLVDTGKLKLDQPVPIAKAELAPPGLHSPIRDQHPEGATLSLREVIRFAVAESDGT
HHEEEEEECCCEEECCCCCCCHHCCCCCCCCCCCCCCCCCCCEEHHHHHHHHHHHCCCCC
ASDVLLRLSGGPSAVTAYLRGLGINGVIVATSELEMSRGPMVQYRNWATPDSMVDLLRAF
HHHEEEEECCCHHHHHHHHHHCCCCEEEEEECCHHCCCCCEEEECCCCCHHHHHHHHHHH
HAGRGLSPAARTLLEDFMAQSTPGPKRLKGLLPPGTRVAHKTGTSGTDGALTRATNDVGI
HCCCCCCHHHHHHHHHHHHHCCCCHHHHHCCCCCCCEEEECCCCCCCCCCEEECCCCEEE
VTLPNGRHLAIAVFVSDSTASLDLREEAIAKIARAAWDAFQ
EECCCCCEEEEEEEEECCCCCCHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8141562 [H]