Click here to switch to the map view.

The map label for this gene is ycjS [C]

Identifier: 116621378

GI number: 116621378

Start: 2886515

End: 2887810

Strand: Direct

Name: ycjS [C]

Synonym: Acid_2259

Alternate gene names: 116621378

Gene position: 2886515-2887810 (Clockwise)

Preceding gene: 116621375

Following gene: 116621379

Centisome position: 28.96

GC content: 66.05

Gene sequence:

>1296_bases
ATGTCCAACGACGGTGTTTCCAGACGGCATTTTTTCTTCGGCAGTCTCCTGGCGGGAGCGGTCCCGGCAGCCGGATTCGG
CAGCGTTCCTTCGCTGCGGGCCCTGGGCTACAAGCCCTTCTACGACAAATTGAACGTCGCTTCCATCGGCTGTGGAGGCC
AGGGCGGCGTGGACTTGAATGATGCCGCCCGGACGGAAAACATCGTAGCGCTGTGCGACGTGGATGAAGCGCGCGCCGCC
GCCAATTTCAAGAAGTTCGAGAAGCAGCCGAAGTACAAGGACTTTCGCGTCATGCTCGAAAAAGAGGGCAAGAACATCGA
CGCGGTCACGATCGGCATCCCGGATTTCATGCACGCCCAGGTGGCGCTCGCCTGCATGCAGCATGGCAAGCACGTCTATT
GCGAAAAGCCGCTGACCCGGACTCCGTGGGAGGCGCGGATCCTGATGGAAGCCGCCGCCAAGTACAAAGTTGCGACCCAG
ATGGGCAACCAGGGCTTCTCACACGAAGCCAACCGCGTGGCCGCCGAGATCGTGTGGTCGGGCGCCATCGGCGACGTCAC
CGAGGCGCACATTTCGACCACGCCCGGCACCCATCCTACCGGCTTGCAGCAGCCGCCGCCCGAGGATTCCGTGCCCGACA
CGCTCGACTGGCAGGACTGGCTTGGCGCCGCCACCATGCGGCCCTACAGCGCCTATTACACGCCGTACAACTGGCGCGGG
TTCCTGGATTTCGGCACGGGCCAGATCGGCAACTGGGCCACCCACACCGCCGGCCCGGTCCATACCGCCCTGCAATTGGG
AGCGCCGACCAGCGTGGAGTGCGTCAGCCTGGTGGGCTCGAGCAAGATCACGTATCCTGATCGCGGCACCGTCCGGCTGG
ATTTCCCGGCGCGCGGCGGCATGGCTCCGGTGAAGGTCTTCTATCACGATGGTCCGCATGCCAACGATCCCGATCTGTAT
CACGTCCCCGGGATGGAGAATGAGACTATCCTGCCGCCGGTCAACAATTTGGTGGATAAGGGCCGCGGGACTGCCGGCCG
CGGCGGCGGCGGACGCGGCCCTGGAGCCGGCGGTGCGGGACGCGGTGCGGGCGCCCCTCCGGCGCGTCCGGCGGGAACTC
CGCGCCAAGGCGCGGGCGGCCCCGGAGTGCGCGTGTTCGGCGAACCCATGGGTCCTGTGCAGCCCGGCGTCCTGACCGGC
AACGGCAGCGTCTTTATCGGTACCAAGGGCATCATGGCGACGTCGAGCCGCGGAGAGGGCGTCCAACTTCTGCCCGCCGC
GCGCTGGGCGGAATAA

Upstream 100 bases:

>100_bases
TGGCATGTGCAGGCGTCCTTAAGAGTTTAACTCACGGTACCGAAGGGCCACGGCGAGAGTTGTTATTATGAGCGGGAACT
CTTTGGGAGGTACTCGCGGC

Downstream 100 bases:

>100_bases
GTTCTGCCGCCGCAGTTGCTGACGCGCTCGCCCGGACACATGCTGGATTGGGTCCGCGCCTGCAAGGGCGGCGAAATGAG
CTGCTCCGATTTCAGCATCT

Product: oxidoreductase domain-containing protein

Products: NA

Alternate protein names: Oxidoreductase Domain-Containing Protein; NADH-Dependent Dehydrogenase; Oxidoreductase; Dehydrogenase; NADH-Dependent Dyhydrogenase; Dehydrogenase-Like Protein; Inositol 2-Dehydrogenase; NADH-Dependent Dihydrogenase; NADH-Dependent Dehydrogenase-Like Protein; NADH-Dependent Deydrogenase; Dehydrogenases And Related Proteins; Hydrogenase; Dehydrogenase And Relate Protein; NADH-Dependent Dyhydrogenase Family Protein; Dehydrogenases Related Protein

Number of amino acids: Translated: 431; Mature: 430

Protein sequence:

>431_residues
MSNDGVSRRHFFFGSLLAGAVPAAGFGSVPSLRALGYKPFYDKLNVASIGCGGQGGVDLNDAARTENIVALCDVDEARAA
ANFKKFEKQPKYKDFRVMLEKEGKNIDAVTIGIPDFMHAQVALACMQHGKHVYCEKPLTRTPWEARILMEAAAKYKVATQ
MGNQGFSHEANRVAAEIVWSGAIGDVTEAHISTTPGTHPTGLQQPPPEDSVPDTLDWQDWLGAATMRPYSAYYTPYNWRG
FLDFGTGQIGNWATHTAGPVHTALQLGAPTSVECVSLVGSSKITYPDRGTVRLDFPARGGMAPVKVFYHDGPHANDPDLY
HVPGMENETILPPVNNLVDKGRGTAGRGGGGRGPGAGGAGRGAGAPPARPAGTPRQGAGGPGVRVFGEPMGPVQPGVLTG
NGSVFIGTKGIMATSSRGEGVQLLPAARWAE

Sequences:

>Translated_431_residues
MSNDGVSRRHFFFGSLLAGAVPAAGFGSVPSLRALGYKPFYDKLNVASIGCGGQGGVDLNDAARTENIVALCDVDEARAA
ANFKKFEKQPKYKDFRVMLEKEGKNIDAVTIGIPDFMHAQVALACMQHGKHVYCEKPLTRTPWEARILMEAAAKYKVATQ
MGNQGFSHEANRVAAEIVWSGAIGDVTEAHISTTPGTHPTGLQQPPPEDSVPDTLDWQDWLGAATMRPYSAYYTPYNWRG
FLDFGTGQIGNWATHTAGPVHTALQLGAPTSVECVSLVGSSKITYPDRGTVRLDFPARGGMAPVKVFYHDGPHANDPDLY
HVPGMENETILPPVNNLVDKGRGTAGRGGGGRGPGAGGAGRGAGAPPARPAGTPRQGAGGPGVRVFGEPMGPVQPGVLTG
NGSVFIGTKGIMATSSRGEGVQLLPAARWAE
>Mature_430_residues
SNDGVSRRHFFFGSLLAGAVPAAGFGSVPSLRALGYKPFYDKLNVASIGCGGQGGVDLNDAARTENIVALCDVDEARAAA
NFKKFEKQPKYKDFRVMLEKEGKNIDAVTIGIPDFMHAQVALACMQHGKHVYCEKPLTRTPWEARILMEAAAKYKVATQM
GNQGFSHEANRVAAEIVWSGAIGDVTEAHISTTPGTHPTGLQQPPPEDSVPDTLDWQDWLGAATMRPYSAYYTPYNWRGF
LDFGTGQIGNWATHTAGPVHTALQLGAPTSVECVSLVGSSKITYPDRGTVRLDFPARGGMAPVKVFYHDGPHANDPDLYH
VPGMENETILPPVNNLVDKGRGTAGRGGGGRGPGAGGAGRGAGAPPARPAGTPRQGAGGPGVRVFGEPMGPVQPGVLTGN
GSVFIGTKGIMATSSRGEGVQLLPAARWAE

Specific function: Unknown

COG id: COG0673

COG function: function code R; Predicted dehydrogenases and related proteins

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: 1.-.-.- [C]

Molecular weight: Translated: 45401; Mature: 45269

Theoretical pI: Translated: 7.96; Mature: 7.96

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSNDGVSRRHFFFGSLLAGAVPAAGFGSVPSLRALGYKPFYDKLNVASIGCGGQGGVDLN
CCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCHHHCCCCCCCCCCCEEEECCCCCCCCCCC
DAARTENIVALCDVDEARAAANFKKFEKQPKYKDFRVMLEKEGKNIDAVTIGIPDFMHAQ
CCCCCCCEEEEECCHHHHHHHHHHHHHCCCCCCCEEEEEECCCCCCCEEEECCCHHHHHH
VALACMQHGKHVYCEKPLTRTPWEARILMEAAAKYKVATQMGNQGFSHEANRVAAEIVWS
HHHHHHHCCCEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHEEEEEEEC
GAIGDVTEAHISTTPGTHPTGLQQPPPEDSVPDTLDWQDWLGAATMRPYSAYYTPYNWRG
CCCCCCHHHEEECCCCCCCCCCCCCCCCCCCCCCCCHHHHHCHHHCCCCCEECCCCCCEE
FLDFGTGQIGNWATHTAGPVHTALQLGAPTSVECVSLVGSSKITYPDRGTVRLDFPARGG
EEECCCCCCCCCCCCCCCCHHHHHCCCCCCCHHHHHHHCCCEECCCCCCEEEEECCCCCC
MAPVKVFYHDGPHANDPDLYHVPGMENETILPPVNNLVDKGRGTAGRGGGGRGPGAGGAG
CCEEEEEECCCCCCCCCCEEECCCCCCCEECCCHHHHHHCCCCCCCCCCCCCCCCCCCCC
RGAGAPPARPAGTPRQGAGGPGVRVFGEPMGPVQPGVLTGNGSVFIGTKGIMATSSRGEG
CCCCCCCCCCCCCCCCCCCCCCEEEECCCCCCCCCCEEECCCCEEEECCCEEEECCCCCC
VQLLPAARWAE
EEEECCCCCCC
>Mature Secondary Structure 
SNDGVSRRHFFFGSLLAGAVPAAGFGSVPSLRALGYKPFYDKLNVASIGCGGQGGVDLN
CCCCCCHHHHHHHHHHHHHCCCCCCCCCCCHHHCCCCCCCCCCCEEEECCCCCCCCCCC
DAARTENIVALCDVDEARAAANFKKFEKQPKYKDFRVMLEKEGKNIDAVTIGIPDFMHAQ
CCCCCCCEEEEECCHHHHHHHHHHHHHCCCCCCCEEEEEECCCCCCCEEEECCCHHHHHH
VALACMQHGKHVYCEKPLTRTPWEARILMEAAAKYKVATQMGNQGFSHEANRVAAEIVWS
HHHHHHHCCCEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHEEEEEEEC
GAIGDVTEAHISTTPGTHPTGLQQPPPEDSVPDTLDWQDWLGAATMRPYSAYYTPYNWRG
CCCCCCHHHEEECCCCCCCCCCCCCCCCCCCCCCCCHHHHHCHHHCCCCCEECCCCCCEE
FLDFGTGQIGNWATHTAGPVHTALQLGAPTSVECVSLVGSSKITYPDRGTVRLDFPARGG
EEECCCCCCCCCCCCCCCCHHHHHCCCCCCCHHHHHHHCCCEECCCCCCEEEEECCCCCC
MAPVKVFYHDGPHANDPDLYHVPGMENETILPPVNNLVDKGRGTAGRGGGGRGPGAGGAG
CCEEEEEECCCCCCCCCCEEECCCCCCCEECCCHHHHHHCCCCCCCCCCCCCCCCCCCCC
RGAGAPPARPAGTPRQGAGGPGVRVFGEPMGPVQPGVLTGNGSVFIGTKGIMATSSRGEG
CCCCCCCCCCCCCCCCCCCCCCEEEECCCCCCCCCCEEECCCCEEEECCCEEEECCCCCC
VQLLPAARWAE
EEEECCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA