| Definition | Candidatus Solibacter usitatus Ellin6076 chromosome, complete genome. |
|---|---|
| Accession | NC_008536 |
| Length | 9,965,640 |
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The map label for this gene is 116621316
Identifier: 116621316
GI number: 116621316
Start: 2815734
End: 2817623
Strand: Direct
Name: 116621316
Synonym: Acid_2197
Alternate gene names: NA
Gene position: 2815734-2817623 (Clockwise)
Preceding gene: 116621310
Following gene: 116621317
Centisome position: 28.25
GC content: 66.03
Gene sequence:
>1890_bases GTGAGGTTCACATCGAACAGAAGTTCGGCGTCGTCACCGGCAGGCCGGCGACCCTACGCATCCGCTACTACAATATCCAG CCCGATCGCTTCTCCTGGACCGCCGACCGCTCAATGGACGGCGGCAAAACCTGGTCCAAAGAAGACCAGAAGATCGAGGC GCACCGCATTGGCCCGGCGCGTTCGCTCGGCGCGCTGGCGCCCGCGCGATAGTCTTGCTGGTATGCCGGAAAATCCCATT TCCGACCCGAGGTCCGAATTCATCAACGTGTCGGTTTGGCACGGGTCGCTCGATCGGGCGCGGGAGATCCTCAGCGCGCA TCCCGAAGTCGCAAGCAGCGACATCCACACAGCCGCGCTGCTCGGCGACCACGAGGCAGTCGCACGGTTCCTCGCCGAGG ATCCGGCGACCGCCACCGCCAAGGGGGGGCCGCGCAATTGGGACGCGCTGACCTACCTCTGTTTCTCCAAATTTCTGCGG CTCGAGCTGGTTCGCACGCCGGGCTTTCTCAAATCCGCGGCCGTCCTGCTGGATGCGGGCGCCAACCCCAACACCGGCTT CTTCGAAGAAAATCACCAGCCCAAGCCCGAATGGGAATGCGCGCTCTACGGCGCGGCGGGCGTGGCTCATCATCCGGAAC TGACGAAGCTGCTGCTCGATCGCGGCGCGGATCCGAATGACGGCGAGGTTGCCTACCATTCGCCGGAGACGCTGGATAAC CGCACCATCCATGTCCTGGTGCAGAGCGGCAGGCTCACGCAGGACAGCATTGGTTTGATGCTCGCCCGCAAGTTCAACTG GCATGACGATGATGGCGTGCACTGGCTGTTGGAGCATGGCGCGGATCCGAATTGGCCTTTGCGGGGCAGCCGTCCGCTGC ACTACGCGCTGCGCCACGGCACGCCCATCCACTATTTCGAGTGGCTGCTGGACCATGGCGCGGACCCGCTGCTGCCGGAC AAGAATGGGACGGTGCCGGCGGGGGAAGCCGCGCGCCTGGGACGGGCGGACGTCCTGGAACTGTTCGAAAGACGAGGGGT GGTGATCGCGCTTGAAGGAGATGATGAGTTCCTGGCGGCGTGCGCGCGGGCGAATGCGGGAGAGGCGCGTAAGCTCGCGG CGGCGAACCCCTCGGTCGTGGAACGCATGCAGTCGCAGAACCCCGGCATGCTTGCGGATTTCGCGGGCACGGGCAACACG GCGGCAGTGCGGTTGATGCTGGACTTAGGCTTTGATGCGGGCATGGCGCGGGTCCAGCCCAATTGGGTCGCCGGCGAAAC CGCGCTGCACGTCGCGGCGGCGCGCGGCCGCCAAGCGGTGGCGGAGTTGCTGATTGAACGCGGCGCGCCGTTGGAGGCCC GGCAGCAACGCGGCTGGACGCCACTGCGCGTAGCCTTCCTTTGCCTGGAGCAGCAATCGGAGTGGACGCCGAACGAGTAC ACGCTGCCCATTGCCGAAGCGTTGATCAAGGCCGGCGCCAGCGTGGAAGCTGCGGGGCTCACTCTGACCGCGGCTGTGTG TCTCGGCCGCGGCGATGACATCGCGCGGCTGGCGAAGAAGGCGGACGCCGAAGAAAAGCAGAAGGCACTGGCAGCCGCGG CTTATAACGGCAGCGTGGACGCGATCGACGCTGCGCTCGCGCTCGGGGCGGACCCTAACGCACCGAACGGTGGGGCTCAA TCCCAACGCGACCGCGCTGCACAATGCCGTTTGCTCCGGGTCGCTGGCCGCGGTGAGGAGACTCGTGGATACGGGAGCTC GTGTGGATGCGAGGGATGGGCCGTACCAGGCTACGCCGCTCGCGTGGGCGGAGTACTTCGTGCGCGAGAGTCAGGGGAGC AAGCAGTACGGCGAGATCGCGCGGTATTTGCGCGGGAGGGAGAATTCTGA
Upstream 100 bases:
>100_bases ACACTGCGATCCTACAATGCCGGACTCGATCGCTGGGAACTCGCCGGCATGGTCGAAGGCGGCGGCTTGCAGGACGTGGG CACCGGGAGGCGCGAGGGCG
Downstream 100 bases:
>100_bases TTAGCGACCGCTCCCTTATAGTTACTCCGTGAGGAGAAATATGGTTTAAGGTTTTCCACAGCCGGCGAAACCGGCGAGCC TGTGGAAAAGGATGTTCGCT
Product: ankyrin
Products: NA
Alternate protein names: Ankyrin Repeat Protein; Ankyrin Repeat-Containing Protein
Number of amino acids: Translated: 629; Mature: 629
Protein sequence:
>629_residues MRFTSNRSSASSPAGRRPYASATTISSPIASPGPPTAQWTAAKPGPKKTRRSRRTALARRVRSARWRPRDSLAGMPENPI SDPRSEFINVSVWHGSLDRAREILSAHPEVASSDIHTAALLGDHEAVARFLAEDPATATAKGGPRNWDALTYLCFSKFLR LELVRTPGFLKSAAVLLDAGANPNTGFFEENHQPKPEWECALYGAAGVAHHPELTKLLLDRGADPNDGEVAYHSPETLDN RTIHVLVQSGRLTQDSIGLMLARKFNWHDDDGVHWLLEHGADPNWPLRGSRPLHYALRHGTPIHYFEWLLDHGADPLLPD KNGTVPAGEAARLGRADVLELFERRGVVIALEGDDEFLAACARANAGEARKLAAANPSVVERMQSQNPGMLADFAGTGNT AAVRLMLDLGFDAGMARVQPNWVAGETALHVAAARGRQAVAELLIERGAPLEARQQRGWTPLRVAFLCLEQQSEWTPNEY TLPIAEALIKAGASVEAAGLTLTAAVCLGRGDDIARLAKKADAEEKQKALAAAAYNGSVDAIDAALALGADPNAPNGGAQ SQRDRAAQCRLLRVAGRGEETRGYGSSCGCEGWAVPGYAARVGGVLRARESGEQAVRRDRAVFAREGEF
Sequences:
>Translated_629_residues MRFTSNRSSASSPAGRRPYASATTISSPIASPGPPTAQWTAAKPGPKKTRRSRRTALARRVRSARWRPRDSLAGMPENPI SDPRSEFINVSVWHGSLDRAREILSAHPEVASSDIHTAALLGDHEAVARFLAEDPATATAKGGPRNWDALTYLCFSKFLR LELVRTPGFLKSAAVLLDAGANPNTGFFEENHQPKPEWECALYGAAGVAHHPELTKLLLDRGADPNDGEVAYHSPETLDN RTIHVLVQSGRLTQDSIGLMLARKFNWHDDDGVHWLLEHGADPNWPLRGSRPLHYALRHGTPIHYFEWLLDHGADPLLPD KNGTVPAGEAARLGRADVLELFERRGVVIALEGDDEFLAACARANAGEARKLAAANPSVVERMQSQNPGMLADFAGTGNT AAVRLMLDLGFDAGMARVQPNWVAGETALHVAAARGRQAVAELLIERGAPLEARQQRGWTPLRVAFLCLEQQSEWTPNEY TLPIAEALIKAGASVEAAGLTLTAAVCLGRGDDIARLAKKADAEEKQKALAAAAYNGSVDAIDAALALGADPNAPNGGAQ SQRDRAAQCRLLRVAGRGEETRGYGSSCGCEGWAVPGYAARVGGVLRARESGEQAVRRDRAVFAREGEF >Mature_629_residues MRFTSNRSSASSPAGRRPYASATTISSPIASPGPPTAQWTAAKPGPKKTRRSRRTALARRVRSARWRPRDSLAGMPENPI SDPRSEFINVSVWHGSLDRAREILSAHPEVASSDIHTAALLGDHEAVARFLAEDPATATAKGGPRNWDALTYLCFSKFLR LELVRTPGFLKSAAVLLDAGANPNTGFFEENHQPKPEWECALYGAAGVAHHPELTKLLLDRGADPNDGEVAYHSPETLDN RTIHVLVQSGRLTQDSIGLMLARKFNWHDDDGVHWLLEHGADPNWPLRGSRPLHYALRHGTPIHYFEWLLDHGADPLLPD KNGTVPAGEAARLGRADVLELFERRGVVIALEGDDEFLAACARANAGEARKLAAANPSVVERMQSQNPGMLADFAGTGNT AAVRLMLDLGFDAGMARVQPNWVAGETALHVAAARGRQAVAELLIERGAPLEARQQRGWTPLRVAFLCLEQQSEWTPNEY TLPIAEALIKAGASVEAAGLTLTAAVCLGRGDDIARLAKKADAEEKQKALAAAAYNGSVDAIDAALALGADPNAPNGGAQ SQRDRAAQCRLLRVAGRGEETRGYGSSCGCEGWAVPGYAARVGGVLRARESGEQAVRRDRAVFAREGEF
Specific function: Unknown
COG id: COG0666
COG function: function code R; FOG: Ankyrin repeat
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Homo sapiens, GI70780355, Length=426, Percent_Identity=26.9953051643192, Blast_Score=69, Evalue=2e-11, Organism=Homo sapiens, GI215598574, Length=426, Percent_Identity=26.9953051643192, Blast_Score=69, Evalue=2e-11, Organism=Homo sapiens, GI70780357, Length=426, Percent_Identity=26.9953051643192, Blast_Score=68, Evalue=2e-11, Organism=Homo sapiens, GI70780353, Length=426, Percent_Identity=26.9953051643192, Blast_Score=68, Evalue=3e-11, Organism=Homo sapiens, GI70780359, Length=426, Percent_Identity=26.9953051643192, Blast_Score=68, Evalue=3e-11, Organism=Caenorhabditis elegans, GI17542700, Length=368, Percent_Identity=28.2608695652174, Blast_Score=78, Evalue=2e-14, Organism=Caenorhabditis elegans, GI71981389, Length=368, Percent_Identity=28.2608695652174, Blast_Score=78, Evalue=2e-14, Organism=Caenorhabditis elegans, GI25145251, Length=368, Percent_Identity=28.2608695652174, Blast_Score=78, Evalue=2e-14, Organism=Caenorhabditis elegans, GI71981414, Length=368, Percent_Identity=28.2608695652174, Blast_Score=76, Evalue=4e-14, Organism=Caenorhabditis elegans, GI71981411, Length=368, Percent_Identity=26.6304347826087, Blast_Score=70, Evalue=3e-12, Organism=Drosophila melanogaster, GI28571867, Length=315, Percent_Identity=28.5714285714286, Blast_Score=77, Evalue=4e-14, Organism=Drosophila melanogaster, GI28571865, Length=315, Percent_Identity=28.5714285714286, Blast_Score=77, Evalue=4e-14, Organism=Drosophila melanogaster, GI161082089, Length=368, Percent_Identity=27.1739130434783, Blast_Score=75, Evalue=9e-14, Organism=Drosophila melanogaster, GI161082085, Length=364, Percent_Identity=27.4725274725275, Blast_Score=74, Evalue=2e-13, Organism=Drosophila melanogaster, GI161082099, Length=364, Percent_Identity=27.4725274725275, Blast_Score=74, Evalue=3e-13, Organism=Drosophila melanogaster, GI161082096, Length=354, Percent_Identity=27.1186440677966, Blast_Score=73, Evalue=5e-13, Organism=Drosophila melanogaster, GI161082106, Length=354, Percent_Identity=27.1186440677966, Blast_Score=73, Evalue=5e-13, Organism=Drosophila melanogaster, GI161082081, Length=354, Percent_Identity=27.1186440677966, Blast_Score=73, Evalue=5e-13, Organism=Drosophila melanogaster, GI161082110, Length=354, Percent_Identity=27.1186440677966, Blast_Score=73, Evalue=5e-13, Organism=Drosophila melanogaster, GI281359521, Length=202, Percent_Identity=30.1980198019802, Blast_Score=71, Evalue=2e-12, Organism=Drosophila melanogaster, GI281359519, Length=202, Percent_Identity=30.1980198019802, Blast_Score=71, Evalue=2e-12, Organism=Drosophila melanogaster, GI28558752, Length=202, Percent_Identity=30.1980198019802, Blast_Score=71, Evalue=2e-12, Organism=Drosophila melanogaster, GI28558750, Length=202, Percent_Identity=30.1980198019802, Blast_Score=71, Evalue=2e-12, Organism=Drosophila melanogaster, GI28558756, Length=202, Percent_Identity=30.1980198019802, Blast_Score=71, Evalue=2e-12, Organism=Drosophila melanogaster, GI28558754, Length=202, Percent_Identity=30.1980198019802, Blast_Score=71, Evalue=2e-12,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 67661; Mature: 67661
Theoretical pI: Translated: 7.45; Mature: 7.45
Prosite motif: PS50088 ANK_REPEAT ; PS50297 ANK_REP_REGION
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRFTSNRSSASSPAGRRPYASATTISSPIASPGPPTAQWTAAKPGPKKTRRSRRTALARR CCCCCCCCCCCCCCCCCCCCCHHCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHH VRSARWRPRDSLAGMPENPISDPRSEFINVSVWHGSLDRAREILSAHPEVASSDIHTAAL HHHHCCCCCHHCCCCCCCCCCCCHHHEEEEEEECCCHHHHHHHHHCCCCHHCCCCHHHHH LGDHEAVARFLAEDPATATAKGGPRNWDALTYLCFSKFLRLELVRTPGFLKSAAVLLDAG HCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHEHEEECC ANPNTGFFEENHQPKPEWECALYGAAGVAHHPELTKLLLDRGADPNDGEVAYHSPETLDN CCCCCCCCCCCCCCCCCCEEEEEECCCCCCCHHHHHHHHHCCCCCCCCCEEECCCCCCCC RTIHVLVQSGRLTQDSIGLMLARKFNWHDDDGVHWLLEHGADPNWPLRGSRPLHYALRHG CEEEEEEECCCCCHHHHHHHEEHCCCCCCCCCCEEHHHCCCCCCCCCCCCCCHHHHHHCC TPIHYFEWLLDHGADPLLPDKNGTVPAGEAARLGRADVLELFERRGVVIALEGDDEFLAA CHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHCCHHHHHHHHHHCCEEEEEECCHHHHHH CARANAGEARKLAAANPSVVERMQSQNPGMLADFAGTGNTAAVRLMLDLGFDAGMARVQP HHHCCCCCHHHHHCCCHHHHHHHHCCCCCEEEEECCCCCCEEEEEEEECCCCCCCCEECC NWVAGETALHVAAARGRQAVAELLIERGAPLEARQQRGWTPLRVAFLCLEQQSEWTPNEY CCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHCCCCHHHHHHHHHHCCCCCCCCCE TLPIAEALIKAGASVEAAGLTLTAAVCLGRGDDIARLAKKADAEEKQKALAAAAYNGSVD ECHHHHHHHHCCCCCCCCCHHEEEHHHHCCCCHHHHHHHHCCHHHHHHHHHHHHCCCCHH AIDAALALGADPNAPNGGAQSQRDRAAQCRLLRVAGRGEETRGYGSSCGCEGWAVPGYAA HHHHHHHCCCCCCCCCCCCCHHHHHHHHHEEEEECCCCCCCCCCCCCCCCCCCCCCCHHH RVGGVLRARESGEQAVRRDRAVFAREGEF HHHHHHHHHHHHHHHHHHHHHHHHCCCCC >Mature Secondary Structure MRFTSNRSSASSPAGRRPYASATTISSPIASPGPPTAQWTAAKPGPKKTRRSRRTALARR CCCCCCCCCCCCCCCCCCCCCHHCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHH VRSARWRPRDSLAGMPENPISDPRSEFINVSVWHGSLDRAREILSAHPEVASSDIHTAAL HHHHCCCCCHHCCCCCCCCCCCCHHHEEEEEEECCCHHHHHHHHHCCCCHHCCCCHHHHH LGDHEAVARFLAEDPATATAKGGPRNWDALTYLCFSKFLRLELVRTPGFLKSAAVLLDAG HCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHEHEEECC ANPNTGFFEENHQPKPEWECALYGAAGVAHHPELTKLLLDRGADPNDGEVAYHSPETLDN CCCCCCCCCCCCCCCCCCEEEEEECCCCCCCHHHHHHHHHCCCCCCCCCEEECCCCCCCC RTIHVLVQSGRLTQDSIGLMLARKFNWHDDDGVHWLLEHGADPNWPLRGSRPLHYALRHG CEEEEEEECCCCCHHHHHHHEEHCCCCCCCCCCEEHHHCCCCCCCCCCCCCCHHHHHHCC TPIHYFEWLLDHGADPLLPDKNGTVPAGEAARLGRADVLELFERRGVVIALEGDDEFLAA CHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHCCHHHHHHHHHHCCEEEEEECCHHHHHH CARANAGEARKLAAANPSVVERMQSQNPGMLADFAGTGNTAAVRLMLDLGFDAGMARVQP HHHCCCCCHHHHHCCCHHHHHHHHCCCCCEEEEECCCCCCEEEEEEEECCCCCCCCEECC NWVAGETALHVAAARGRQAVAELLIERGAPLEARQQRGWTPLRVAFLCLEQQSEWTPNEY CCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHCCCCHHHHHHHHHHCCCCCCCCCE TLPIAEALIKAGASVEAAGLTLTAAVCLGRGDDIARLAKKADAEEKQKALAAAAYNGSVD ECHHHHHHHHCCCCCCCCCHHEEEHHHHCCCCHHHHHHHHCCHHHHHHHHHHHHCCCCHH AIDAALALGADPNAPNGGAQSQRDRAAQCRLLRVAGRGEETRGYGSSCGCEGWAVPGYAA HHHHHHHCCCCCCCCCCCCCHHHHHHHHHEEEEECCCCCCCCCCCCCCCCCCCCCCCHHH RVGGVLRARESGEQAVRRDRAVFAREGEF HHHHHHHHHHHHHHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA