| Definition | Candidatus Solibacter usitatus Ellin6076 chromosome, complete genome. |
|---|---|
| Accession | NC_008536 |
| Length | 9,965,640 |
Click here to switch to the map view.
The map label for this gene is 116621295
Identifier: 116621295
GI number: 116621295
Start: 2786713
End: 2787219
Strand: Direct
Name: 116621295
Synonym: Acid_2176
Alternate gene names: NA
Gene position: 2786713-2787219 (Clockwise)
Preceding gene: 116621294
Following gene: 116621296
Centisome position: 27.96
GC content: 60.75
Gene sequence:
>507_bases ATGATCCGTTCCTCACTCATCGTGCTTCTCGCCGCCGGCGCGCTCATGGCCCAGTCCAACCCCGTCATCACCGAGCAGAA GGCCGCCTACACGGCCAACAAGAACAACCTCATCAAGGCCGCCGAGAAAATGCCCGAGGAGGCCTATACCTTCAAGCCCA CTCCCGAAATGCAATCCTTCGGTGAGCGCATCGCCCATATCGCCAACCAGATGGGAACCTGTAGCGCCATGACCGGCGAA CGCAAACCGTCTCCCGCCGCGGGTAAGACGTCCAAGGCCGACCTCGTCGCCGCCCTCAAGGCGAGTTTCGATGCCTGCGA CGCCGCCTGGGACAGCATGAACGATAAGACCGCCATGGAAATGGTCGCCGGCCGCGGCGGTGCCCAGCGCTCCAAACTCT CCGGCATGATCGGCAATACCACTCACAACACCGAACTTTACGGTTATATCTCCGTTTACATGCGTCTCAAAGGTGTCGTG CCCCCTACCAGCGACCGCGCGATGTAA
Upstream 100 bases:
>100_bases GGCTTCCACGTAAAGCGAATGCTTCCACTCGCAGCCACTCGCAACGCGATCTACAGTAGAATATCTCCTGACCCCATATC AGACTTAGGAGACTATCCAA
Downstream 100 bases:
>100_bases CAAGTGTTACTTCCTGCCGCCGCCCGCATGAGTAAGTGGGCGGCTTGCTTTTTCACCTCTGGTTTCTCTTGTTATGAAAC GGTTAATCTGCTACTCTTCA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 168; Mature: 168
Protein sequence:
>168_residues MIRSSLIVLLAAGALMAQSNPVITEQKAAYTANKNNLIKAAEKMPEEAYTFKPTPEMQSFGERIAHIANQMGTCSAMTGE RKPSPAAGKTSKADLVAALKASFDACDAAWDSMNDKTAMEMVAGRGGAQRSKLSGMIGNTTHNTELYGYISVYMRLKGVV PPTSDRAM
Sequences:
>Translated_168_residues MIRSSLIVLLAAGALMAQSNPVITEQKAAYTANKNNLIKAAEKMPEEAYTFKPTPEMQSFGERIAHIANQMGTCSAMTGE RKPSPAAGKTSKADLVAALKASFDACDAAWDSMNDKTAMEMVAGRGGAQRSKLSGMIGNTTHNTELYGYISVYMRLKGVV PPTSDRAM >Mature_168_residues MIRSSLIVLLAAGALMAQSNPVITEQKAAYTANKNNLIKAAEKMPEEAYTFKPTPEMQSFGERIAHIANQMGTCSAMTGE RKPSPAAGKTSKADLVAALKASFDACDAAWDSMNDKTAMEMVAGRGGAQRSKLSGMIGNTTHNTELYGYISVYMRLKGVV PPTSDRAM
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 17940; Mature: 17940
Theoretical pI: Translated: 9.42; Mature: 9.42
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 7.1 %Met (Translated Protein) 8.3 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 7.1 %Met (Mature Protein) 8.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIRSSLIVLLAAGALMAQSNPVITEQKAAYTANKNNLIKAAEKMPEEAYTFKPTPEMQSF CCCHHHHHHHHHHHHHHCCCCCCCCCCHHHCCCCCHHHHHHHHCCHHHCCCCCCHHHHHH GERIAHIANQMGTCSAMTGERKPSPAAGKTSKADLVAALKASFDACDAAWDSMNDKTAME HHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHH MVAGRGGAQRSKLSGMIGNTTHNTELYGYISVYMRLKGVVPPTSDRAM HHHCCCCCCHHHHHCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCC >Mature Secondary Structure MIRSSLIVLLAAGALMAQSNPVITEQKAAYTANKNNLIKAAEKMPEEAYTFKPTPEMQSF CCCHHHHHHHHHHHHHHCCCCCCCCCCHHHCCCCCHHHHHHHHCCHHHCCCCCCHHHHHH GERIAHIANQMGTCSAMTGERKPSPAAGKTSKADLVAALKASFDACDAAWDSMNDKTAME HHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHH MVAGRGGAQRSKLSGMIGNTTHNTELYGYISVYMRLKGVVPPTSDRAM HHHCCCCCCHHHHHCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA