| Definition | Candidatus Solibacter usitatus Ellin6076 chromosome, complete genome. |
|---|---|
| Accession | NC_008536 |
| Length | 9,965,640 |
Click here to switch to the map view.
The map label for this gene is 116621291
Identifier: 116621291
GI number: 116621291
Start: 2781043
End: 2782686
Strand: Reverse
Name: 116621291
Synonym: Acid_2172
Alternate gene names: NA
Gene position: 2782686-2781043 (Counterclockwise)
Preceding gene: 116621292
Following gene: 116621289
Centisome position: 27.92
GC content: 54.56
Gene sequence:
>1644_bases ATGGATCGATTCTCGGAATGTTACCAAGAGCTGATTGAGTGGAGCTATGACTCGGCAGACCGTATCGTCTTGAATGCGTA CTTCCCAATGGGGCAGCAACCGGGAGGCATGCTGGTGTGGTGGCGAAATCTGTATGGACGTGATGAAACGATGGATACGG CGCATCTAATGCGTATGGCTGGGCGGTTTTCGCGCCGCGTGCGAGCTTTTGCCGACGCCAAGGGCATTCCGATTATTGAC TGTGCACCGAACGTAAAGAAGTTCGAGATTGCGCAGGCGGACCTCAGCAAACACGATGGAAAGCCTGGAGTGTTTCTGAT TCTGGTAGCGAAATCCAAGGCTCCTGTGTGGGAGGTAGAGCGGACGACCACCGGCAAAGTGGGTGCGATCCGTCGCAAGA AACCGATGCCTTACGTGAATCATTATTCGTTCCACATCTGGGATACGGAGTGGGGCCACATCACGATCAAGATGAGCGGG CATCCACCTTTTGGCGCGCAGATCATTCTTAATGGTCATGACTATTTATCCTGCGCCGCCAAACAAGCCGGACTGACAGT GACCAAGCAAGCGAACTGTTTTGTCCAGACTTCCGACGCGGCAGGCTTGACGAAGATCGCAGACACCTTGTCTGAACCCG AGACAGAAGGGCGGCTTCGAGAGCTTTGCGACCGTTGGATTTATAGCAGTTGTTTGATATTCGGGCTGGACCTGGAGGAG CAGCAGCGCAGTGGATTTCAGTATCGGTATTCCACGTATCAATTGGAGTACTGCCGGAATTTCTGCTTTTCCAGCGGAAG AAAAATGTGGGAAATCCTGCAGCGCTTAGTCGATCGAACGCGCAGCAGATTGGACCTGAAAGTGGTGAAAACCATCTTCG GTTTCAAGAACCGGCCGCGAGTCAAGCGCCTGAAGCAGAACAAGTGGGGAGTTGAAGTCGAGACACCTACCTATGATCTG ACGGTCTTTCACGTGCACTATGGCAAGTTGAGCCTGAAGATCTATAGCAAAGGCGAGTTCATTCTCCGCATCGAAGTGAT GGTGCACAATGCTTCGGATACGCCGTTTCGGCGATCGTTGGTGGATTTTCCGAAGTTGGTAAGCTGGGCGAAGGACGTCC TGGAACGCTTTCTCGATGCCCTGCAATGTGTGGATGTTTGCTTTATTTCCGACGAGGCGATGGAAACGCTTCCGGAACCA AGCACTGTGGGGAAGACCAGAGTTGGGGGAATCGATCTCAATCGTCCCCGGATGCGTTTGGTGGTGCGGACCATTCTGTC TCTGTCGACTTCACCGACTGGCTTTAGCGCCCGGGAGGTGAGCCGCAAAGTTCGTTCCTTGGGCGGATTGCCGGAGGACG AGTACGGGTGCCGGCAAGCCGCCTACGATTTGAAAAAACTCCGCGGTAAAGAGTGGATCCGACGCAAAGGCAACTCCCGG AGGTATGAAGCTGTGGCGGAAGGACTGCGATCCATGGCGGCTCTGATCGTGCTCCGCGATGATGTGATCAAGCCCTTGCT GGCAGCCCAGGGCCGGCTCAAACCAGGACGCCGGCCCACTCAAACCGCGCCTATTGACGCCCACTACGCGGCACTTCGGA GTCAGATGAGAAAGCTATTCCTCGACCTTGGGACCGCTGCATAA
Upstream 100 bases:
>100_bases AATGCACAGTAATACATGCTTTTTCCGAGACTGGGCTCGGAAAAAGAGGCCCTGCGGGCCGCCATGTCCGGGAGTAGAGT GGTTCATCGAGGAGCATCAG
Downstream 100 bases:
>100_bases GATCGACAAAAGTTTTTGAGTTCATACCTGAAGTAGCACAATGGCGGCCATCGAGTGTTGGGGAGTGAACCGAAGTTAGT GTTCCGAGCTGTTCTGTTTA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 547; Mature: 547
Protein sequence:
>547_residues MDRFSECYQELIEWSYDSADRIVLNAYFPMGQQPGGMLVWWRNLYGRDETMDTAHLMRMAGRFSRRVRAFADAKGIPIID CAPNVKKFEIAQADLSKHDGKPGVFLILVAKSKAPVWEVERTTTGKVGAIRRKKPMPYVNHYSFHIWDTEWGHITIKMSG HPPFGAQIILNGHDYLSCAAKQAGLTVTKQANCFVQTSDAAGLTKIADTLSEPETEGRLRELCDRWIYSSCLIFGLDLEE QQRSGFQYRYSTYQLEYCRNFCFSSGRKMWEILQRLVDRTRSRLDLKVVKTIFGFKNRPRVKRLKQNKWGVEVETPTYDL TVFHVHYGKLSLKIYSKGEFILRIEVMVHNASDTPFRRSLVDFPKLVSWAKDVLERFLDALQCVDVCFISDEAMETLPEP STVGKTRVGGIDLNRPRMRLVVRTILSLSTSPTGFSAREVSRKVRSLGGLPEDEYGCRQAAYDLKKLRGKEWIRRKGNSR RYEAVAEGLRSMAALIVLRDDVIKPLLAAQGRLKPGRRPTQTAPIDAHYAALRSQMRKLFLDLGTAA
Sequences:
>Translated_547_residues MDRFSECYQELIEWSYDSADRIVLNAYFPMGQQPGGMLVWWRNLYGRDETMDTAHLMRMAGRFSRRVRAFADAKGIPIID CAPNVKKFEIAQADLSKHDGKPGVFLILVAKSKAPVWEVERTTTGKVGAIRRKKPMPYVNHYSFHIWDTEWGHITIKMSG HPPFGAQIILNGHDYLSCAAKQAGLTVTKQANCFVQTSDAAGLTKIADTLSEPETEGRLRELCDRWIYSSCLIFGLDLEE QQRSGFQYRYSTYQLEYCRNFCFSSGRKMWEILQRLVDRTRSRLDLKVVKTIFGFKNRPRVKRLKQNKWGVEVETPTYDL TVFHVHYGKLSLKIYSKGEFILRIEVMVHNASDTPFRRSLVDFPKLVSWAKDVLERFLDALQCVDVCFISDEAMETLPEP STVGKTRVGGIDLNRPRMRLVVRTILSLSTSPTGFSAREVSRKVRSLGGLPEDEYGCRQAAYDLKKLRGKEWIRRKGNSR RYEAVAEGLRSMAALIVLRDDVIKPLLAAQGRLKPGRRPTQTAPIDAHYAALRSQMRKLFLDLGTAA >Mature_547_residues MDRFSECYQELIEWSYDSADRIVLNAYFPMGQQPGGMLVWWRNLYGRDETMDTAHLMRMAGRFSRRVRAFADAKGIPIID CAPNVKKFEIAQADLSKHDGKPGVFLILVAKSKAPVWEVERTTTGKVGAIRRKKPMPYVNHYSFHIWDTEWGHITIKMSG HPPFGAQIILNGHDYLSCAAKQAGLTVTKQANCFVQTSDAAGLTKIADTLSEPETEGRLRELCDRWIYSSCLIFGLDLEE QQRSGFQYRYSTYQLEYCRNFCFSSGRKMWEILQRLVDRTRSRLDLKVVKTIFGFKNRPRVKRLKQNKWGVEVETPTYDL TVFHVHYGKLSLKIYSKGEFILRIEVMVHNASDTPFRRSLVDFPKLVSWAKDVLERFLDALQCVDVCFISDEAMETLPEP STVGKTRVGGIDLNRPRMRLVVRTILSLSTSPTGFSAREVSRKVRSLGGLPEDEYGCRQAAYDLKKLRGKEWIRRKGNSR RYEAVAEGLRSMAALIVLRDDVIKPLLAAQGRLKPGRRPTQTAPIDAHYAALRSQMRKLFLDLGTAA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 62528; Mature: 62528
Theoretical pI: Translated: 10.00; Mature: 10.00
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.0 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 4.6 %Cys+Met (Translated Protein) 2.0 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 4.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDRFSECYQELIEWSYDSADRIVLNAYFPMGQQPGGMLVWWRNLYGRDETMDTAHLMRMA CCHHHHHHHHHHHCCCCCCCEEEEEEECCCCCCCCCEEEEEHHHCCCCCCHHHHHHHHHH GRFSRRVRAFADAKGIPIIDCAPNVKKFEIAQADLSKHDGKPGVFLILVAKSKAPVWEVE HHHHHHHHHHHCCCCCEEEECCCCCCEEEEHHHHHHHCCCCCCEEEEEEECCCCCEEEEC RTTTGKVGAIRRKKPMPYVNHYSFHIWDTEWGHITIKMSGHPPFGAQIILNGHDYLSCAA CCCCCCCCCHHCCCCCCCCCCEEEEEEECCCCEEEEEECCCCCCCCEEEECCCHHHHHHH KQAGLTVTKQANCFVQTSDAAGLTKIADTLSEPETEGRLRELCDRWIYSSCLIFGLDLEE HHCCCEEEECCCEEEEECCCCCHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHEEECCCHH QQRSGFQYRYSTYQLEYCRNFCFSSGRKMWEILQRLVDRTRSRLDLKVVKTIFGFKNRPR HHHCCCEEEEHHEEHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCH VKRLKQNKWGVEVETPTYDLTVFHVHYGKLSLKIYSKGEFILRIEVMVHNASDTPFRRSL HHHHHCCCCCEEEECCEEEEEEEEEEECEEEEEEEECCCEEEEEEEEEECCCCCCHHHHH VDFPKLVSWAKDVLERFLDALQCVDVCFISDEAMETLPEPSTVGKTRVGGIDLNRPRMRL HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHCCCCCCCCCCEECCCCCCCHHHHH VVRTILSLSTSPTGFSAREVSRKVRSLGGLPEDEYGCRQAAYDLKKLRGKEWIRRKGNSR HHHHHHHHCCCCCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCH RYEAVAEGLRSMAALIVLRDDVIKPLLAAQGRLKPGRRPTQTAPIDAHYAALRSQMRKLF HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHH LDLGTAA HHHCCCC >Mature Secondary Structure MDRFSECYQELIEWSYDSADRIVLNAYFPMGQQPGGMLVWWRNLYGRDETMDTAHLMRMA CCHHHHHHHHHHHCCCCCCCEEEEEEECCCCCCCCCEEEEEHHHCCCCCCHHHHHHHHHH GRFSRRVRAFADAKGIPIIDCAPNVKKFEIAQADLSKHDGKPGVFLILVAKSKAPVWEVE HHHHHHHHHHHCCCCCEEEECCCCCCEEEEHHHHHHHCCCCCCEEEEEEECCCCCEEEEC RTTTGKVGAIRRKKPMPYVNHYSFHIWDTEWGHITIKMSGHPPFGAQIILNGHDYLSCAA CCCCCCCCCHHCCCCCCCCCCEEEEEEECCCCEEEEEECCCCCCCCEEEECCCHHHHHHH KQAGLTVTKQANCFVQTSDAAGLTKIADTLSEPETEGRLRELCDRWIYSSCLIFGLDLEE HHCCCEEEECCCEEEEECCCCCHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHEEECCCHH QQRSGFQYRYSTYQLEYCRNFCFSSGRKMWEILQRLVDRTRSRLDLKVVKTIFGFKNRPR HHHCCCEEEEHHEEHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCH VKRLKQNKWGVEVETPTYDLTVFHVHYGKLSLKIYSKGEFILRIEVMVHNASDTPFRRSL HHHHHCCCCCEEEECCEEEEEEEEEEECEEEEEEEECCCEEEEEEEEEECCCCCCHHHHH VDFPKLVSWAKDVLERFLDALQCVDVCFISDEAMETLPEPSTVGKTRVGGIDLNRPRMRL HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHCCCCCCCCCCEECCCCCCCHHHHH VVRTILSLSTSPTGFSAREVSRKVRSLGGLPEDEYGCRQAAYDLKKLRGKEWIRRKGNSR HHHHHHHHCCCCCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCH RYEAVAEGLRSMAALIVLRDDVIKPLLAAQGRLKPGRRPTQTAPIDAHYAALRSQMRKLF HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHH LDLGTAA HHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA