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The map label for this gene is ybdA [C]

Identifier: 116621286

GI number: 116621286

Start: 2773667

End: 2774824

Strand: Direct

Name: ybdA [C]

Synonym: Acid_2167

Alternate gene names: 116621286

Gene position: 2773667-2774824 (Clockwise)

Preceding gene: 116621284

Following gene: 116621287

Centisome position: 27.83

GC content: 61.23

Gene sequence:

>1158_bases
ATGTGGATAGGCGCCTGTACTTCCAGTATCGGCACCTGGATGCAGGTCCTGGCGCAAAGCTGGCTGGTGCTCAAGCTTTC
CAACTCCGCATTCCTGCTGGGCCTGGACGCATTCCTCGGCGGCCTCCCCATCTTCCTCTTCTCGCTGGTGGGCGGCGTCA
TCGCGGACCGCATGGACCGCCGGAAAGTGCTGCTCGGCTCCCAGTACGTGCAGATGGGCTGCGCCTTCCTCCTCACCACG
CTGATCGCCACCCACGTGGTTCATGTCTGGATGATCCTGTGCCTCTCCTTCGTCGCTGGCCTCGCGCAGGCCTTCGGCGG
ACCGGCCTACCAGGCGCTCACTCCTATGCTGGTGGAAAAAGAGGACATGCCCAACGCCATCGCCCTCCAATCCATCCAGT
TCAATGTGGCGCGCGTCATCGGCCCCGCCTTGGGCGGAATCGCACTCACGCAGCTCGGCGAAAAATGGTGCTTCGCGCTC
AACGGCATCTCCTTTCTGGCGCCCATCATCTCCCTCACGGTGATCAAGACCCGTTTCCTCCCGGCCAAAACCTCCGAATC
CATTCTGGCCGGGATGAAGCAGGGAATCTCCTTCATCCGCAAACAGAGCGCCATGGAAGGACTCATGATCCTTGCCTTCT
GCATGACCGCGCTTGGCATCCCGATGATGACCTTCCTGCCGGTCTTTGCCAAAGACATCTTCAAACAGGGTCCCACCGTT
TTCACGCTCTTCCTTTCCTCCTCCGGCGTCGGCTCGATCGTCGGCGCGCTCACCGTGGCCGCCCTCGGTAATGTCAGGCA
CAAGGGCCGCATCGCCCTCGTCATGCTTACCTGCCTGGGCGCGGGCATCGCGGGATTCGCGCTTTCCACCACCCTCTGGG
TCAGTTGCCTCATGCTCTTCCTGTCGGGAGCTGCGATGATCAGCGTCTTCGCGCTGGTCAACTCCCTGGTGCAGTTGATC
ACCACCAACGAAATGCGCGGCCGCGTCATGAGCGTATACAACTTCGCCTTCCGCGGCGGCATGCCTCTGGGAAACCTGAT
GACCGGATGGCTCGTCCCTATGTTTTCAGCGCCGCTCGTGCTCGCCGTCAATGGAGTAGTCCTCATGATGGTGGCGCTTT
ATTTCCTGGCAGTGCAACGCCGGGTGGCAGCTCTTTGA

Upstream 100 bases:

>100_bases
AATCCAATTCATGCCCACCGGGCAGTTTCGCCACTGGTAGACATCTTCAATCGTGATCGGCCGGGTCTTCAAAGCATTTC
AATATCGCGATTTCCGCCTG

Downstream 100 bases:

>100_bases
TGTAATAGAGAAGAGGGACTCATGCTGGTAGTGTTCATCGCAGCATTCATGGCGGCTTCCGGCGCGCCGTCTCCCCTGGA
GATGGCGCGCGATAAGCAGG

Product: major facilitator transporter

Products: NA

Alternate protein names: Facilitator Superfamily Protein; Integral Membrane Efflux Protein; Facilitator Superfamily Permease; Transmembrane Efflux Protein; Multidrug ABC Transporter; Facilitator Superfamily Transporter; Permeases Of Facilitator Superfamily; Permease; Mfs Transporter; Transporter Facilitator Family; Arabinose Efflux Permease Family Protein; MFS Permease; Transporter Facilitator Family Protein; MFS Family Transporter; Drug Resistance Efflux Protein; MFS Family Transporter Protein; Facilitator Superfamily; Arabinose Efflux Permease; Permease Of Facilitator Superfamily Protein; MFS Transporter; Facilitator Transpoter; MFS Family Membrane Efflux Protein; Macrolide-Efflux Protein; Facilitator Superfamily Multidrug Efflux Transporter; Permease Of Facilitator Superfamily; Dioxygenase; Transport Transmembrane Protein; MFS Superfamily Transporter; Permeases Of Facilitator Superfamily Protein

Number of amino acids: Translated: 385; Mature: 385

Protein sequence:

>385_residues
MWIGACTSSIGTWMQVLAQSWLVLKLSNSAFLLGLDAFLGGLPIFLFSLVGGVIADRMDRRKVLLGSQYVQMGCAFLLTT
LIATHVVHVWMILCLSFVAGLAQAFGGPAYQALTPMLVEKEDMPNAIALQSIQFNVARVIGPALGGIALTQLGEKWCFAL
NGISFLAPIISLTVIKTRFLPAKTSESILAGMKQGISFIRKQSAMEGLMILAFCMTALGIPMMTFLPVFAKDIFKQGPTV
FTLFLSSSGVGSIVGALTVAALGNVRHKGRIALVMLTCLGAGIAGFALSTTLWVSCLMLFLSGAAMISVFALVNSLVQLI
TTNEMRGRVMSVYNFAFRGGMPLGNLMTGWLVPMFSAPLVLAVNGVVLMMVALYFLAVQRRVAAL

Sequences:

>Translated_385_residues
MWIGACTSSIGTWMQVLAQSWLVLKLSNSAFLLGLDAFLGGLPIFLFSLVGGVIADRMDRRKVLLGSQYVQMGCAFLLTT
LIATHVVHVWMILCLSFVAGLAQAFGGPAYQALTPMLVEKEDMPNAIALQSIQFNVARVIGPALGGIALTQLGEKWCFAL
NGISFLAPIISLTVIKTRFLPAKTSESILAGMKQGISFIRKQSAMEGLMILAFCMTALGIPMMTFLPVFAKDIFKQGPTV
FTLFLSSSGVGSIVGALTVAALGNVRHKGRIALVMLTCLGAGIAGFALSTTLWVSCLMLFLSGAAMISVFALVNSLVQLI
TTNEMRGRVMSVYNFAFRGGMPLGNLMTGWLVPMFSAPLVLAVNGVVLMMVALYFLAVQRRVAAL
>Mature_385_residues
MWIGACTSSIGTWMQVLAQSWLVLKLSNSAFLLGLDAFLGGLPIFLFSLVGGVIADRMDRRKVLLGSQYVQMGCAFLLTT
LIATHVVHVWMILCLSFVAGLAQAFGGPAYQALTPMLVEKEDMPNAIALQSIQFNVARVIGPALGGIALTQLGEKWCFAL
NGISFLAPIISLTVIKTRFLPAKTSESILAGMKQGISFIRKQSAMEGLMILAFCMTALGIPMMTFLPVFAKDIFKQGPTV
FTLFLSSSGVGSIVGALTVAALGNVRHKGRIALVMLTCLGAGIAGFALSTTLWVSCLMLFLSGAAMISVFALVNSLVQLI
TTNEMRGRVMSVYNFAFRGGMPLGNLMTGWLVPMFSAPLVLAVNGVVLMMVALYFLAVQRRVAAL

Specific function: Unknown

COG id: COG0477

COG function: function code GEPR; Permeases of the major facilitator superfamily

Gene ontology:

Cell location: Integral Membrane Protein [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 41138; Mature: 41138

Theoretical pI: Translated: 10.29; Mature: 10.29

Prosite motif: PS50850 MFS

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.8 %Cys     (Translated Protein)
6.0 %Met     (Translated Protein)
7.8 %Cys+Met (Translated Protein)
1.8 %Cys     (Mature Protein)
6.0 %Met     (Mature Protein)
7.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure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HHHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure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HHHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: NA