| Definition | Candidatus Solibacter usitatus Ellin6076 chromosome, complete genome. |
|---|---|
| Accession | NC_008536 |
| Length | 9,965,640 |
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The map label for this gene is icfG [H]
Identifier: 116621278
GI number: 116621278
Start: 2761772
End: 2763676
Strand: Reverse
Name: icfG [H]
Synonym: Acid_2159
Alternate gene names: 116621278
Gene position: 2763676-2761772 (Counterclockwise)
Preceding gene: 116621279
Following gene: 116621277
Centisome position: 27.73
GC content: 62.15
Gene sequence:
>1905_bases ATGAAGCAGGACGACGGAGTGGTTTGGGCGAAGCTTGGCCGGATTGAGAAGGTCTTCTTCTTTCTGGTGGCCTTGTGGGC CTTACTTTACCTCACCGGACTGGCGAGCGGCTATCAGACCATGGTCGCGATCGCAGCGCTCCTGATGGGCGTAGCGACTG TCGTGAAGCTCGGCCGGATGGGACTGCGCAACGCGATCTGGCGGCTGCGCAATCGCCTGATTGTCGCCTACCTGTTTATC GCGGTGGTACCGATCGCGCTGATCCTTGCGCTGATGCTGGGCACCTCTTACGCCATCGTCGGCCAGGTCGCGGTTTATCT TGTCGAGCGCCAGCTCGATAACCGGATGCGCACGCTCGCCTTCCCGGCGGAGGCGCTGACCCGCGCACCGGCCCGCGATC CGCAGACCGCGCTGGCTCGCTTCCTGCCCGCGATGCGCCGCAGCTTCCCGGTTTTTGAGATGCTGGTCACCGGCGAACAG CAGTTCCGCTATCCGGAGAATTCCACTCTCACGCCGCCGCCGGAGCCGTGGAAGAACGCGACCGGGCTGATCACGAGGCG CGATGCCGATGGCGAGCACCTCTACGCCTGGGCGCATTCCGAGGACAAGGGCAACGAGGTCACGATCCTGGCGCCAATCA CGCACGACCTGCTGGTCAACCTGGTGCCCGGCATTGGAGACGTGAACTTTATCAGATACACTACCGGCTCCTCGCGCTCG CCGGTGCCGCCGCCGGTGAATGCACTGGATTACGCGGTCAGTTTTCTGTATCCGATGTTCGTACCTTCCTGGGAGAATCC GCAGGCGCCGCCCAAGCGGCTCTTCTTCGTGGTGGATACGCGCTACTCGGCCGTGCTCGGCATCGTCTTCGGGCAGAAGG CCGATTGGAGCGACCTCGCGATCAGCGCCCTGATCGCTCTGCTGGTTGTATTCTTTCTAGTCGAAATCGTTTCGCTCTGG GCCGGCGTCAAGCTCACGCGCACCATCACGGGCGCGGTGCATGAACTCTACGAAGGCACCCGCCACGTGCGCGAGGGCGA TTTCAACTACCGGATACCGGTGAATGGCGCCGATCAGTTGGGCGAGTTGAGCAGTTCCTTCAATACCATGACGGAGAACT TGGGCCGCCTGATCGTGGTGGCGAAGGAAAAGGAGCGTCTGGAATCCGAACTCGCGATCGCGCGGGAAGTTCAGAACCAG CTCTTCCCCAAGGACGTTCCGTTCACCAAATCGCTGGAGTTGAAGGGCGTCTGCAACCCGGCCCGCATGGTCTCGGGCGA TTACTACGACTTCATGTCGCTGCCGGGCGGCGATCTCGCTTTCGCCATCGGCGACGTGGCGGGCAAGGGAATCTCGGCGG CGCTGCTGATGGCCACGATTCAATCCACCATGCGCACGCAGTTGAGCTCGCTCAATTGCAGCAACGGCGGCGCGCATCCG CTCTCGGCCGCCAACATGGTATCCACGCTTAATCGCCAGCTCTACGCGACCACGTCGCCCGAGAAGTACGCCACGTTCTA CTTTGCTCTCTACGACGAGATGAAGCATGCGCTGACCTACACCAACGCCGGTCATCTGGCGCCCATGCTGTTGAGCGGCG GCGATATCCGGATGCTGGATTCGACCGGCACGGTGGTGGGCGCTTTTCCGATCGCGGTGTATGAAGAACAGACGGTCACG CTGGAGCGCGGCGACGTGCTGGTGGCGTACACCGATGGCATCGTGGAACCGGAAAACGTCTACGGCGAAATGTTCGGCGA GGAGCGGCTCAAAGACCTGCTCGTCAAATACTCCAAGGCCGATTCCGCCGAGCTGATCGCGCGCACCATGGAGGCGGTGG TGCAGTGGACCGGAGCCGGCGAATTGCAGGACGATATGACCATGGTGGTGGTGCGCCGCATATGA
Upstream 100 bases:
>100_bases GAACCGCGATTTTGGGCGCTTCGCCGCGCGTCCAACGTACAGATATCCCGACTAATGGCATACGTGTACACGTCCGGTAA GCTAGTCTGGAGTCATAGGC
Downstream 100 bases:
>100_bases AGGTTCTGACCGCGGCTGAAATGCGCGAAGTGGACCGGCTGACCATTGAAGCCGGAATTCCGGGAATCGTCCTGATGGAG AATGCGGGGCACCGGGTGCT
Product: serine phosphatase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 634; Mature: 634
Protein sequence:
>634_residues MKQDDGVVWAKLGRIEKVFFFLVALWALLYLTGLASGYQTMVAIAALLMGVATVVKLGRMGLRNAIWRLRNRLIVAYLFI AVVPIALILALMLGTSYAIVGQVAVYLVERQLDNRMRTLAFPAEALTRAPARDPQTALARFLPAMRRSFPVFEMLVTGEQ QFRYPENSTLTPPPEPWKNATGLITRRDADGEHLYAWAHSEDKGNEVTILAPITHDLLVNLVPGIGDVNFIRYTTGSSRS PVPPPVNALDYAVSFLYPMFVPSWENPQAPPKRLFFVVDTRYSAVLGIVFGQKADWSDLAISALIALLVVFFLVEIVSLW AGVKLTRTITGAVHELYEGTRHVREGDFNYRIPVNGADQLGELSSSFNTMTENLGRLIVVAKEKERLESELAIAREVQNQ LFPKDVPFTKSLELKGVCNPARMVSGDYYDFMSLPGGDLAFAIGDVAGKGISAALLMATIQSTMRTQLSSLNCSNGGAHP LSAANMVSTLNRQLYATTSPEKYATFYFALYDEMKHALTYTNAGHLAPMLLSGGDIRMLDSTGTVVGAFPIAVYEEQTVT LERGDVLVAYTDGIVEPENVYGEMFGEERLKDLLVKYSKADSAELIARTMEAVVQWTGAGELQDDMTMVVVRRI
Sequences:
>Translated_634_residues MKQDDGVVWAKLGRIEKVFFFLVALWALLYLTGLASGYQTMVAIAALLMGVATVVKLGRMGLRNAIWRLRNRLIVAYLFI AVVPIALILALMLGTSYAIVGQVAVYLVERQLDNRMRTLAFPAEALTRAPARDPQTALARFLPAMRRSFPVFEMLVTGEQ QFRYPENSTLTPPPEPWKNATGLITRRDADGEHLYAWAHSEDKGNEVTILAPITHDLLVNLVPGIGDVNFIRYTTGSSRS PVPPPVNALDYAVSFLYPMFVPSWENPQAPPKRLFFVVDTRYSAVLGIVFGQKADWSDLAISALIALLVVFFLVEIVSLW AGVKLTRTITGAVHELYEGTRHVREGDFNYRIPVNGADQLGELSSSFNTMTENLGRLIVVAKEKERLESELAIAREVQNQ LFPKDVPFTKSLELKGVCNPARMVSGDYYDFMSLPGGDLAFAIGDVAGKGISAALLMATIQSTMRTQLSSLNCSNGGAHP LSAANMVSTLNRQLYATTSPEKYATFYFALYDEMKHALTYTNAGHLAPMLLSGGDIRMLDSTGTVVGAFPIAVYEEQTVT LERGDVLVAYTDGIVEPENVYGEMFGEERLKDLLVKYSKADSAELIARTMEAVVQWTGAGELQDDMTMVVVRRI >Mature_634_residues MKQDDGVVWAKLGRIEKVFFFLVALWALLYLTGLASGYQTMVAIAALLMGVATVVKLGRMGLRNAIWRLRNRLIVAYLFI AVVPIALILALMLGTSYAIVGQVAVYLVERQLDNRMRTLAFPAEALTRAPARDPQTALARFLPAMRRSFPVFEMLVTGEQ QFRYPENSTLTPPPEPWKNATGLITRRDADGEHLYAWAHSEDKGNEVTILAPITHDLLVNLVPGIGDVNFIRYTTGSSRS PVPPPVNALDYAVSFLYPMFVPSWENPQAPPKRLFFVVDTRYSAVLGIVFGQKADWSDLAISALIALLVVFFLVEIVSLW AGVKLTRTITGAVHELYEGTRHVREGDFNYRIPVNGADQLGELSSSFNTMTENLGRLIVVAKEKERLESELAIAREVQNQ LFPKDVPFTKSLELKGVCNPARMVSGDYYDFMSLPGGDLAFAIGDVAGKGISAALLMATIQSTMRTQLSSLNCSNGGAHP LSAANMVSTLNRQLYATTSPEKYATFYFALYDEMKHALTYTNAGHLAPMLLSGGDIRMLDSTGTVVGAFPIAVYEEQTVT LERGDVLVAYTDGIVEPENVYGEMFGEERLKDLLVKYSKADSAELIARTMEAVVQWTGAGELQDDMTMVVVRRI
Specific function: Involved in cross-regulation of inorganic carbon and glucose metabolisms [H]
COG id: COG2208
COG function: function code TK; Serine phosphatase RsbU, regulator of sigma subunit
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Contains 1 PP2C-like domain [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003660 - InterPro: IPR001932 - InterPro: IPR010822 [H]
Pfam domain/function: PF00672 HAMP; PF07228 SpoIIE [H]
EC number: NA
Molecular weight: Translated: 69922; Mature: 69922
Theoretical pI: Translated: 5.75; Mature: 5.75
Prosite motif: PS50885 HAMP
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 3.5 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 3.5 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKQDDGVVWAKLGRIEKVFFFLVALWALLYLTGLASGYQTMVAIAALLMGVATVVKLGRM CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHH GLRNAIWRLRNRLIVAYLFIAVVPIALILALMLGTSYAIVGQVAVYLVERQLDNRMRTLA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHC FPAEALTRAPARDPQTALARFLPAMRRSFPVFEMLVTGEQQFRYPENSTLTPPPEPWKNA CCHHHHHCCCCCCHHHHHHHHHHHHHHCCCHHHHHHCCHHHHCCCCCCCCCCCCCCCCCC TGLITRRDADGEHLYAWAHSEDKGNEVTILAPITHDLLVNLVPGIGDVNFIRYTTGSSRS CCEEEEECCCCCEEEEEECCCCCCCEEEEEECCHHHHHHHHCCCCCCCEEEEEECCCCCC PVPPPVNALDYAVSFLYPMFVPSWENPQAPPKRLFFVVDTRYSAVLGIVFGQKADWSDLA CCCCCCHHHHHHHHHHHHHHCCCCCCCCCCHHHEEEEEECCHHHHHHHHCCCCCCHHHHH ISALIALLVVFFLVEIVSLWAGVKLTRTITGAVHELYEGTRHVREGDFNYRIPVNGADQL HHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCHHHH GELSSSFNTMTENLGRLIVVAKEKERLESELAIAREVQNQLFPKDVPFTKSLELKGVCNP HHHHHHHHHHHHCCCCEEEEECHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCH ARMVSGDYYDFMSLPGGDLAFAIGDVAGKGISAALLMATIQSTMRTQLSSLNCSNGGAHP HHHHCCCCHHHHCCCCCCCEEEEHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC LSAANMVSTLNRQLYATTSPEKYATFYFALYDEMKHALTYTNAGHLAPMLLSGGDIRMLD CHHHHHHHHHCCCEEECCCCCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHCCCCCEEEEE STGTVVGAFPIAVYEEQTVTLERGDVLVAYTDGIVEPENVYGEMFGEERLKDLLVKYSKA CCCCEEEEEEEEEECCCEEEEECCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHCCC DSAELIARTMEAVVQWTGAGELQDDMTMVVVRRI CHHHHHHHHHHHHHHHCCCCCCCCCHHHHHEECC >Mature Secondary Structure MKQDDGVVWAKLGRIEKVFFFLVALWALLYLTGLASGYQTMVAIAALLMGVATVVKLGRM CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHH GLRNAIWRLRNRLIVAYLFIAVVPIALILALMLGTSYAIVGQVAVYLVERQLDNRMRTLA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHC FPAEALTRAPARDPQTALARFLPAMRRSFPVFEMLVTGEQQFRYPENSTLTPPPEPWKNA CCHHHHHCCCCCCHHHHHHHHHHHHHHCCCHHHHHHCCHHHHCCCCCCCCCCCCCCCCCC TGLITRRDADGEHLYAWAHSEDKGNEVTILAPITHDLLVNLVPGIGDVNFIRYTTGSSRS CCEEEEECCCCCEEEEEECCCCCCCEEEEEECCHHHHHHHHCCCCCCCEEEEEECCCCCC PVPPPVNALDYAVSFLYPMFVPSWENPQAPPKRLFFVVDTRYSAVLGIVFGQKADWSDLA CCCCCCHHHHHHHHHHHHHHCCCCCCCCCCHHHEEEEEECCHHHHHHHHCCCCCCHHHHH ISALIALLVVFFLVEIVSLWAGVKLTRTITGAVHELYEGTRHVREGDFNYRIPVNGADQL HHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCHHHH GELSSSFNTMTENLGRLIVVAKEKERLESELAIAREVQNQLFPKDVPFTKSLELKGVCNP HHHHHHHHHHHHCCCCEEEEECHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCH ARMVSGDYYDFMSLPGGDLAFAIGDVAGKGISAALLMATIQSTMRTQLSSLNCSNGGAHP HHHHCCCCHHHHCCCCCCCEEEEHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC LSAANMVSTLNRQLYATTSPEKYATFYFALYDEMKHALTYTNAGHLAPMLLSGGDIRMLD CHHHHHHHHHCCCEEECCCCCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHCCCCCEEEEE STGTVVGAFPIAVYEEQTVTLERGDVLVAYTDGIVEPENVYGEMFGEERLKDLLVKYSKA CCCCEEEEEEEEEECCCEEEEECCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHCCC DSAELIARTMEAVVQWTGAGELQDDMTMVVVRRI CHHHHHHHHHHHHHHHCCCCCCCCCHHHHHEECC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 8075401; 8905231 [H]