| Definition | Candidatus Solibacter usitatus Ellin6076 chromosome, complete genome. |
|---|---|
| Accession | NC_008536 |
| Length | 9,965,640 |
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The map label for this gene is yaeT [C]
Identifier: 116621256
GI number: 116621256
Start: 2735817
End: 2737061
Strand: Direct
Name: yaeT [C]
Synonym: Acid_2137
Alternate gene names: 116621256
Gene position: 2735817-2737061 (Clockwise)
Preceding gene: 116621253
Following gene: 116621260
Centisome position: 27.45
GC content: 63.69
Gene sequence:
>1245_bases ATGCAGCAGATGAGTGTTCTCGGAACCCTGCTGCTGGCCTCGATCGCCGCGGCGCAGCCGCTTACCGTCGCCGGCGTTCG CGTCGCCGGCAATGAGCGCCTGCCTGCCGCCGCGATTCTGCGCGCTACCGGAGTGCGTCCGGGCCAGGCCGCCACCCTCG AGACTCTGGACGCCGCCGTGAGCAGGCTCTTCGAAACTGGCCTCTTCACCTCCCTCAATTACCGCTACGAGCAGATCCCC GGCAGCGACCCAGCCGCCTACATCGTCACCTTTCAACTGCTCGAAGACCGCGCCGATACCGACGTGCGCATTGAGATCGC CGCCATCGATGAAGCCTCTATCTGGAAGGATCTCGCGGCCGCCGACCCACTCGTCACCCGCCGCATGCCGCACAACGACC GTGCCGGCGACTTCTACTGTCGCGCCGTGGAGCGCGTGCTGGAGCGTGCCGGCCGCCACGAAAAGATCGTCGTGTCGAGC TCCGTCGATCTCGCGACCCGGCGCATGGAAACCACCCTCGTCCCGGCCAATCCACCCAAGGTCACCGACGTTCGCTTCCA GGGTATCCACGCCCTCTCCTCCGCCGCCTTGCGCGACGCCGTCGGGCGCATCGTGATCGACAACCGCTACTCGGAGCGCG AATTCCGCCAGGTCCTCGATCTCAATGTGCGGCCAATGTATGAAGAGCGCGGGTACCTGAAGGTCGAGTTCCCCTCCATA CGCTTGACGCCCGCCGCCGGCGATCTCTCGATCGACGTGCAGGTGATCGAAGGCACGCCGTGGACGCTCGGTACAGCCTC GCTCATCGGCGACCACCTTCCCGAGGAAGCGATGCGCAAAGCCTCGGCCCTGTGGGAGGTCCACACGGCCAACTGGAAAC TGATTCTCGAAGCCATCACGCGCATGGAGAAGGTGCTGCGCCGCGAGGGCTACCTTGGCGTAACCTCCAAGCCCGTACGC CTCTTCCGCGACGATGGCCGCACGGTCGATCTCCGTATCGAAGTCACTAAGGGCAAACAGTTCGTGCTCGGCGCCCTGTC TATCGCCGGCTTGAGCGACCGCGATCGCATGCGCGCCGAGAAGCTCTTTCGCATTAAACCCGGCGAACCCCTCGATCAGC CATACCTCGAAGACTATGTGAAACAGTGCCTCGATTTCCTCGGTAACTCCGTGAAAGGCTTCGATTCGAAACTCTCCCTC CGCGGCGATACCAACCTGGTAGACCTGACCCTGACCTTTAAATAG
Upstream 100 bases:
>100_bases TCATGCCCTTCCCAAGGCACGCCAACTGCCGTTCCCCTCTACGAGCCGCAACCGTTACGGAGCAATCGCATTTCGATTAC CCTCTCCACAGTCCGCTAGA
Downstream 100 bases:
>100_bases GCCTCAGCGTGGCGGAATCGCCGGTTCGCCCCCGCCATCCACTAGGCGCCTGAGTTGCAACACGACTTCGTTTAAGCCTC GCGCCTGCCCCGCGAGGTTG
Product: outer membrane protein/protective antigen OMA87-like protein
Products: NA
Alternate protein names: Surface Antigen
Number of amino acids: Translated: 414; Mature: 414
Protein sequence:
>414_residues MQQMSVLGTLLLASIAAAQPLTVAGVRVAGNERLPAAAILRATGVRPGQAATLETLDAAVSRLFETGLFTSLNYRYEQIP GSDPAAYIVTFQLLEDRADTDVRIEIAAIDEASIWKDLAAADPLVTRRMPHNDRAGDFYCRAVERVLERAGRHEKIVVSS SVDLATRRMETTLVPANPPKVTDVRFQGIHALSSAALRDAVGRIVIDNRYSEREFRQVLDLNVRPMYEERGYLKVEFPSI RLTPAAGDLSIDVQVIEGTPWTLGTASLIGDHLPEEAMRKASALWEVHTANWKLILEAITRMEKVLRREGYLGVTSKPVR LFRDDGRTVDLRIEVTKGKQFVLGALSIAGLSDRDRMRAEKLFRIKPGEPLDQPYLEDYVKQCLDFLGNSVKGFDSKLSL RGDTNLVDLTLTFK
Sequences:
>Translated_414_residues MQQMSVLGTLLLASIAAAQPLTVAGVRVAGNERLPAAAILRATGVRPGQAATLETLDAAVSRLFETGLFTSLNYRYEQIP GSDPAAYIVTFQLLEDRADTDVRIEIAAIDEASIWKDLAAADPLVTRRMPHNDRAGDFYCRAVERVLERAGRHEKIVVSS SVDLATRRMETTLVPANPPKVTDVRFQGIHALSSAALRDAVGRIVIDNRYSEREFRQVLDLNVRPMYEERGYLKVEFPSI RLTPAAGDLSIDVQVIEGTPWTLGTASLIGDHLPEEAMRKASALWEVHTANWKLILEAITRMEKVLRREGYLGVTSKPVR LFRDDGRTVDLRIEVTKGKQFVLGALSIAGLSDRDRMRAEKLFRIKPGEPLDQPYLEDYVKQCLDFLGNSVKGFDSKLSL RGDTNLVDLTLTFK >Mature_414_residues MQQMSVLGTLLLASIAAAQPLTVAGVRVAGNERLPAAAILRATGVRPGQAATLETLDAAVSRLFETGLFTSLNYRYEQIP GSDPAAYIVTFQLLEDRADTDVRIEIAAIDEASIWKDLAAADPLVTRRMPHNDRAGDFYCRAVERVLERAGRHEKIVVSS SVDLATRRMETTLVPANPPKVTDVRFQGIHALSSAALRDAVGRIVIDNRYSEREFRQVLDLNVRPMYEERGYLKVEFPSI RLTPAAGDLSIDVQVIEGTPWTLGTASLIGDHLPEEAMRKASALWEVHTANWKLILEAITRMEKVLRREGYLGVTSKPVR LFRDDGRTVDLRIEVTKGKQFVLGALSIAGLSDRDRMRAEKLFRIKPGEPLDQPYLEDYVKQCLDFLGNSVKGFDSKLSL RGDTNLVDLTLTFK
Specific function: Unknown
COG id: COG4775
COG function: function code M; Outer membrane protein/protective antigen OMA87
Gene ontology:
Cell location: Outer Membrane [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: 180 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 80 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 380 Molecules/Cell In: Growth-Phase, Minimal-Media (Based on E. coli). 220 Molecules/Cell In: Stationary Phase, Ri
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 46001; Mature: 46001
Theoretical pI: Translated: 7.07; Mature: 7.07
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQQMSVLGTLLLASIAAAQPLTVAGVRVAGNERLPAAAILRATGVRPGQAATLETLDAAV CCHHHHHHHHHHHHHHHCCCEEEEEEEEECCCCCCHHHHHHHCCCCCCCCHHHHHHHHHH SRLFETGLFTSLNYRYEQIPGSDPAAYIVTFQLLEDRADTDVRIEIAAIDEASIWKDLAA HHHHHHCCCEECCCEEEECCCCCCCEEEEEEEEHHCCCCCCEEEEEEECCCHHHHHHHHH ADPLVTRRMPHNDRAGDFYCRAVERVLERAGRHEKIVVSSSVDLATRRMETTLVPANPPK CCCHHHCCCCCCCCCCHHHHHHHHHHHHHCCCCCEEEEECCCHHHHHHHHEEEECCCCCC VTDVRFQGIHALSSAALRDAVGRIVIDNRYSEREFRQVLDLNVRPMYEERGYLKVEFPSI CEEEEEHHHHHHHHHHHHHHHCEEEECCCCCHHHHHHHHCCCCCEECCCCCEEEEECCCE RLTPAAGDLSIDVQVIEGTPWTLGTASLIGDHLPEEAMRKASALWEVHTANWKLILEAIT EEECCCCCEEEEEEEEECCCCCCCHHHHHHHCCCHHHHHHHHHHEEEECCCHHHHHHHHH RMEKVLRREGYLGVTSKPVRLFRDDGRTVDLRIEVTKGKQFVLGALSIAGLSDRDRMRAE HHHHHHHHCCCCCCCCCCHHEEECCCCEEEEEEEEECCCEEEEEEHEECCCCCHHHHHHH KLFRIKPGEPLDQPYLEDYVKQCLDFLGNSVKGFDSKLSLRGDTNLVDLTLTFK HEEEECCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCEEEECCCCCEEEEEEEEC >Mature Secondary Structure MQQMSVLGTLLLASIAAAQPLTVAGVRVAGNERLPAAAILRATGVRPGQAATLETLDAAV CCHHHHHHHHHHHHHHHCCCEEEEEEEEECCCCCCHHHHHHHCCCCCCCCHHHHHHHHHH SRLFETGLFTSLNYRYEQIPGSDPAAYIVTFQLLEDRADTDVRIEIAAIDEASIWKDLAA HHHHHHCCCEECCCEEEECCCCCCCEEEEEEEEHHCCCCCCEEEEEEECCCHHHHHHHHH ADPLVTRRMPHNDRAGDFYCRAVERVLERAGRHEKIVVSSSVDLATRRMETTLVPANPPK CCCHHHCCCCCCCCCCHHHHHHHHHHHHHCCCCCEEEEECCCHHHHHHHHEEEECCCCCC VTDVRFQGIHALSSAALRDAVGRIVIDNRYSEREFRQVLDLNVRPMYEERGYLKVEFPSI CEEEEEHHHHHHHHHHHHHHHCEEEECCCCCHHHHHHHHCCCCCEECCCCCEEEEECCCE RLTPAAGDLSIDVQVIEGTPWTLGTASLIGDHLPEEAMRKASALWEVHTANWKLILEAIT EEECCCCCEEEEEEEEECCCCCCCHHHHHHHCCCHHHHHHHHHHEEEECCCHHHHHHHHH RMEKVLRREGYLGVTSKPVRLFRDDGRTVDLRIEVTKGKQFVLGALSIAGLSDRDRMRAE HHHHHHHHCCCCCCCCCCHHEEECCCCEEEEEEEEECCCEEEEEEHEECCCCCHHHHHHH KLFRIKPGEPLDQPYLEDYVKQCLDFLGNSVKGFDSKLSLRGDTNLVDLTLTFK HEEEECCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCEEEECCCCCEEEEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: NA