| Definition | Candidatus Solibacter usitatus Ellin6076 chromosome, complete genome. |
|---|---|
| Accession | NC_008536 |
| Length | 9,965,640 |
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The map label for this gene is exuT [H]
Identifier: 116621236
GI number: 116621236
Start: 2706765
End: 2707961
Strand: Direct
Name: exuT [H]
Synonym: Acid_2117
Alternate gene names: 116621236
Gene position: 2706765-2707961 (Clockwise)
Preceding gene: 116621235
Following gene: 116621237
Centisome position: 27.16
GC content: 66.25
Gene sequence:
>1197_bases GTGAGCCATTCCACTGGCGCCACCCACTACCGATGGCTGGTGCTCGGGATCTTCGTCCTCTCCACCGCGATCAACATTCT GGACCGAGCCACGCTCTCCGCGCTTGCGCCCGTGATCAAACAGGAATTTTCGCTCAACAATGAGCAGTTCGGTTGGATCA CCAGCGCCTTCAGCCTCACCTATGCGGCTGCCGCCCCCTTCGCCGGCCTGCTCATCGATCGCCTGGGCTTGAATCGCGTG ATCAGCTTCGCTGTCGGTCTATGGAGCTGCGCCGGGATCGCCACCGGCTTCACCAGCGGACTGGGAGGTCTCGTGGGTTG CCGCGCCGTGCTCGGTGTCGCCGAAGCTGCGGGCATTCCGGCTGCCGGCAAGGCCATCCATAAATACCTGCTGCCGGGTG AACGCGCCCTCGGCAACGGTGTCAATCAGGGCGGCGTCAGCCTCGGGCAAATCGTCGCTCCCGTGTTGGCTACCTTCATG GCCGTGCACTATGGCTGGAGGCAGGCCTTCATCGTCACCGGCGCGCTCGGCCTCGCCTGGATCCCGCTGTGGAATTGGGC CGCCCGCCGTGCCCCCGCGGCCGATCCGCCGAAGCAACAGGCCGGCGCATCCGCCGCCATGCTGCGCGATCGCCGCCTCT GGATTTTCGTGGTGGCCAATGCGCTAAGCATGGTGGGCTACTACCTATGGTTCAGCTGGACTACGCTCTACATGGTGGAC GCGCGCGGCCTCACGCTTCAGCAGGCCGTCCGGTACGTGTGGATTCCGCCGGTGTTTGCCGCTGTCGGAGGCTTCGTCGG CGGCTGGCTCTCGCTCCGCTCCATCGCGCGCGGACTGCCTGCGCCCGCGGCGCGCTTCCGCGTTTGCCTGGCCGCCAGCG TTATCGCGGTTGCCACGGCGGCGATTCCGTGGCTGCCTTCCCCCGCCTGGGCCTCGGCCGGAATCTCGCTCAGCATTCTC GCCGTCGCCGCCTTCAGCGTCAACATGTATACCCTGCCGCTCGACGTCTTCGGCGCCGCGCCTGCCGGCTTCGCCATCGC TGCCCTGGTCTCGAGTTACGGCTTCATTGCTGCCATCGTCGCCCCCATCATCGGCAAAATCATTGACCATCAGGGCTACA CGCCCGTGATCGTCGCCGTCGCCTTCACTCCCCTGGCGGCATCCGCCGTGCTCTGGTTCTCGAGGTCCACGCGATGA
Upstream 100 bases:
>100_bases GTTGTGGCGTGCAGAAGGCACGCAAAATCACGGTCGAGTATTTCGCGAAGGTGAATTCCAAACTGGCCACCGCTGGTGAA GTGGCAACCATCGATTTCCA
Downstream 100 bases:
>100_bases AGGAGTGGATCTTCCGCCTGCTCGGAAAAGGGCCCGAAGCAGTGGTGGTGGTCTTCTGCACCGGCGACCCGGATCTCTGC GCCCGCATGGTGGAAGAGGT
Product: major facilitator transporter
Products: galacturonate [Cytoplasm]; Proton [Cytoplasm]; glucuronate [Cytoplasm] [C]
Alternate protein names: NA
Number of amino acids: Translated: 398; Mature: 397
Protein sequence:
>398_residues MSHSTGATHYRWLVLGIFVLSTAINILDRATLSALAPVIKQEFSLNNEQFGWITSAFSLTYAAAAPFAGLLIDRLGLNRV ISFAVGLWSCAGIATGFTSGLGGLVGCRAVLGVAEAAGIPAAGKAIHKYLLPGERALGNGVNQGGVSLGQIVAPVLATFM AVHYGWRQAFIVTGALGLAWIPLWNWAARRAPAADPPKQQAGASAAMLRDRRLWIFVVANALSMVGYYLWFSWTTLYMVD ARGLTLQQAVRYVWIPPVFAAVGGFVGGWLSLRSIARGLPAPAARFRVCLAASVIAVATAAIPWLPSPAWASAGISLSIL AVAAFSVNMYTLPLDVFGAAPAGFAIAALVSSYGFIAAIVAPIIGKIIDHQGYTPVIVAVAFTPLAASAVLWFSRSTR
Sequences:
>Translated_398_residues MSHSTGATHYRWLVLGIFVLSTAINILDRATLSALAPVIKQEFSLNNEQFGWITSAFSLTYAAAAPFAGLLIDRLGLNRV ISFAVGLWSCAGIATGFTSGLGGLVGCRAVLGVAEAAGIPAAGKAIHKYLLPGERALGNGVNQGGVSLGQIVAPVLATFM AVHYGWRQAFIVTGALGLAWIPLWNWAARRAPAADPPKQQAGASAAMLRDRRLWIFVVANALSMVGYYLWFSWTTLYMVD ARGLTLQQAVRYVWIPPVFAAVGGFVGGWLSLRSIARGLPAPAARFRVCLAASVIAVATAAIPWLPSPAWASAGISLSIL AVAAFSVNMYTLPLDVFGAAPAGFAIAALVSSYGFIAAIVAPIIGKIIDHQGYTPVIVAVAFTPLAASAVLWFSRSTR >Mature_397_residues SHSTGATHYRWLVLGIFVLSTAINILDRATLSALAPVIKQEFSLNNEQFGWITSAFSLTYAAAAPFAGLLIDRLGLNRVI SFAVGLWSCAGIATGFTSGLGGLVGCRAVLGVAEAAGIPAAGKAIHKYLLPGERALGNGVNQGGVSLGQIVAPVLATFMA VHYGWRQAFIVTGALGLAWIPLWNWAARRAPAADPPKQQAGASAAMLRDRRLWIFVVANALSMVGYYLWFSWTTLYMVDA RGLTLQQAVRYVWIPPVFAAVGGFVGGWLSLRSIARGLPAPAARFRVCLAASVIAVATAAIPWLPSPAWASAGISLSILA VAAFSVNMYTLPLDVFGAAPAGFAIAALVSSYGFIAAIVAPIIGKIIDHQGYTPVIVAVAFTPLAASAVLWFSRSTR
Specific function: Aldohexuronate transport system [H]
COG id: COG0477
COG function: function code GEPR; Permeases of the major facilitator superfamily
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the major facilitator superfamily. Phthalate permease family [H]
Homologues:
Organism=Homo sapiens, GI256219543, Length=286, Percent_Identity=22.3776223776224, Blast_Score=67, Evalue=2e-11, Organism=Homo sapiens, GI256219598, Length=286, Percent_Identity=22.3776223776224, Blast_Score=67, Evalue=2e-11, Organism=Homo sapiens, GI4503847, Length=286, Percent_Identity=22.3776223776224, Blast_Score=67, Evalue=2e-11, Organism=Homo sapiens, GI256219483, Length=286, Percent_Identity=22.3776223776224, Blast_Score=67, Evalue=2e-11, Organism=Escherichia coli, GI2367193, Length=402, Percent_Identity=26.865671641791, Blast_Score=131, Evalue=9e-32, Organism=Escherichia coli, GI87082320, Length=310, Percent_Identity=27.4193548387097, Blast_Score=95, Evalue=7e-21, Organism=Escherichia coli, GI2367379, Length=420, Percent_Identity=24.7619047619048, Blast_Score=92, Evalue=8e-20, Organism=Escherichia coli, GI1789515, Length=320, Percent_Identity=23.125, Blast_Score=87, Evalue=3e-18, Organism=Escherichia coli, GI1789152, Length=404, Percent_Identity=23.5148514851485, Blast_Score=78, Evalue=1e-15, Organism=Caenorhabditis elegans, GI17560030, Length=258, Percent_Identity=21.7054263565891, Blast_Score=70, Evalue=2e-12,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004744 - InterPro: IPR020846 - InterPro: IPR011701 - InterPro: IPR016196 [H]
Pfam domain/function: PF07690 MFS_1 [H]
EC number: NA
Molecular weight: Translated: 41798; Mature: 41667
Theoretical pI: Translated: 10.54; Mature: 10.54
Prosite motif: PS00211 ABC_TRANSPORTER_1 ; PS50850 MFS
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 2.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSHSTGATHYRWLVLGIFVLSTAINILDRATLSALAPVIKQEFSLNNEQFGWITSAFSLT CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHH YAAAAPFAGLLIDRLGLNRVISFAVGLWSCAGIATGFTSGLGGLVGCRAVLGVAEAAGIP HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC AAGKAIHKYLLPGERALGNGVNQGGVSLGQIVAPVLATFMAVHYGWRQAFIVTGALGLAW HHHHHHHHHHCCCCHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH IPLWNWAARRAPAADPPKQQAGASAAMLRDRRLWIFVVANALSMVGYYLWFSWTTLYMVD HHHHHHHHHCCCCCCCCHHHHCCHHHHHHCCCEEEHHHHHHHHHHHHHHHHHHHHEEEEE ARGLTLQQAVRYVWIPPVFAAVGGFVGGWLSLRSIARGLPAPAARFRVCLAASVIAVATA CCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHH AIPWLPSPAWASAGISLSILAVAAFSVNMYTLPLDVFGAAPAGFAIAALVSSYGFIAAIV HCCCCCCCCHHHCCCHHHHHHHHHHHCEEEEECHHHHCCCCHHHHHHHHHHHHHHHHHHH APIIGKIIDHQGYTPVIVAVAFTPLAASAVLWFSRSTR HHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHCCCCC >Mature Secondary Structure SHSTGATHYRWLVLGIFVLSTAINILDRATLSALAPVIKQEFSLNNEQFGWITSAFSLT CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHH YAAAAPFAGLLIDRLGLNRVISFAVGLWSCAGIATGFTSGLGGLVGCRAVLGVAEAAGIP HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC AAGKAIHKYLLPGERALGNGVNQGGVSLGQIVAPVLATFMAVHYGWRQAFIVTGALGLAW HHHHHHHHHHCCCCHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH IPLWNWAARRAPAADPPKQQAGASAAMLRDRRLWIFVVANALSMVGYYLWFSWTTLYMVD HHHHHHHHHCCCCCCCCHHHHCCHHHHHHCCCEEEHHHHHHHHHHHHHHHHHHHHEEEEE ARGLTLQQAVRYVWIPPVFAAVGGFVGGWLSLRSIARGLPAPAARFRVCLAASVIAVATA CCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHH AIPWLPSPAWASAGISLSILAVAAFSVNMYTLPLDVFGAAPAGFAIAALVSSYGFIAAIV HCCCCCCCCHHHCCCHHHHHHHHHHHCEEEEECHHHHCCCCHHHHHHHHHHHHHHHHHHH APIIGKIIDHQGYTPVIVAVAFTPLAASAVLWFSRSTR HHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: galacturonate [Periplasm]; Proton [Periplasm]; glucuronate [Periplasm] [C]
Specific reaction: Proton [Periplasm] + galacturonate [Periplasm] = galacturonate [Cytoplasm] + Proton [Cytoplasm] Proton [Periplasm] + glucuronate [Periplasm] = Proton [Cytoplasm] + glucuronate [Cytoplasm] [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 11206551; 11258796 [H]