| Definition | Candidatus Solibacter usitatus Ellin6076 chromosome, complete genome. |
|---|---|
| Accession | NC_008536 |
| Length | 9,965,640 |
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The map label for this gene is 116621194
Identifier: 116621194
GI number: 116621194
Start: 2637518
End: 2638867
Strand: Reverse
Name: 116621194
Synonym: Acid_2075
Alternate gene names: NA
Gene position: 2638867-2637518 (Counterclockwise)
Preceding gene: 116621195
Following gene: 116621193
Centisome position: 26.48
GC content: 59.78
Gene sequence:
>1350_bases ATGAAAAAGCAGCGATTCATCTTTTCAGCCATTCTCTTGATTGCCGGCATAAGCGGGCTCACCGCTCAGACCAAGACCCC GGCGCTCCGGGTTGGGGCCGCGAAGGTAGATGTCACTCCGGCACAGAGTGAACTACCTAGAACGATGGAGGGCATCCACG ACAGACTGCACTCCAGGGCAATCGTGGTGGATAACGGCACGACGGCGGCGGCGATAATCACCCTGGATGCCGGCGGCCTT TCCGAACCGCTCTGGCAAGCCGTGACGCAGCGCATCGAGCGAGAATTGAGCATTCCCGCCAAAAACGTGATGTTCACGGC AACCCATACTCACAGCGCTCCGCGAATGAGCGGACCGGCCGTCGAGCAGAAGATCTTCGACTCCGTTAAGGACGCCAAAA CCAAACTGCAGCCGGCGCGTATCGCGTTCGGCACGGGCGTCTCGTATATCAGCGTCAATCGCAACATCATCGACCCGAAG ACGCGGCGCTGGTGGGAGGGACCGAATTATGAGGGACCTTCCGATAAGACAGTCGCCGTGGTTAGGTTCGAAACTCTCAG CGGCGAACCGATCGCGGTGTACTACAACTATGCGATGCACGCCGTGGCATTGGGCCAGTTGGATCAGGTCAGCGCCGACG CTCCCGGCGCCGCGTCCAAGTACATCGAGGACTCGTTCGACGACAAGATCGTGGCGGTATGGTCCACCGGCGCGGCCGGC GATCAGAACCCGATCTACTTCCAACAGACCTATGACCTGCGCGACATCAGAATCAAGGATTATGCAAAACGTGGCGAAGA CATCAGCAACGCCATGCCGCCCGGCGGCCAGGGACTCAATAAGCAGGACCCCACGGTCCAGCGGCTGATGAACCAGCAGA AGCAGATGGTGCTCTCGATGGGCCAGTTCCTGGGAGAAGAAGTGCTTCACGTGATGCGCGGCATGGATCGGCCGGAGTCC TCCGCCCGGATCTACGCCAATCAGAAGACGGTTAGCTGTCCCGGCCGGCAACGCACCGATACTGGGCGAGCGGGGAATCC CGGCACTTATAAGGATGCCGATCCGGTGGAATTGCGCCTGAGCCTGCTGGTAGTGGGGGACATCGCGTTTTCCGGTGTGA ACGGAGAGGTCTTCAATCTGATCGCCCAGAGACTGAAGAAGGAATCCAAGTTCGCGCACACCATGATGGCGACGCTGACC AACGGCGCGGCGCGGTCGGGCTACATACCGAACGACGCTGCATTCGGGTACAACACCTTCGAGGTTCTTTCGTCGCGGCT CAAACCGGGTTGCGCGGAGAGCGCCATCGTGAACGGAATCCTCGACCTGATGTCCGAGGTCGAATACTGA
Upstream 100 bases:
>100_bases CCTGTATCTGTTTCTTCGCGCCCGCCTGGCTGGACAGCAGCATGCGATCGCGTGATAGCTTCCCCCGGCCGGTCACCACT TAGGATTTTGGAGTTACCGA
Downstream 100 bases:
>100_bases ACGGAATGGGCCGAGGCGCATGAAGACACGCATTAGCATTCTCCTTACTGCTGTTGCCCTGTTGCCTGTAGCGCAGGGCT GGAGCGCCGGTGAGCATTGG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 449; Mature: 449
Protein sequence:
>449_residues MKKQRFIFSAILLIAGISGLTAQTKTPALRVGAAKVDVTPAQSELPRTMEGIHDRLHSRAIVVDNGTTAAAIITLDAGGL SEPLWQAVTQRIERELSIPAKNVMFTATHTHSAPRMSGPAVEQKIFDSVKDAKTKLQPARIAFGTGVSYISVNRNIIDPK TRRWWEGPNYEGPSDKTVAVVRFETLSGEPIAVYYNYAMHAVALGQLDQVSADAPGAASKYIEDSFDDKIVAVWSTGAAG DQNPIYFQQTYDLRDIRIKDYAKRGEDISNAMPPGGQGLNKQDPTVQRLMNQQKQMVLSMGQFLGEEVLHVMRGMDRPES SARIYANQKTVSCPGRQRTDTGRAGNPGTYKDADPVELRLSLLVVGDIAFSGVNGEVFNLIAQRLKKESKFAHTMMATLT NGAARSGYIPNDAAFGYNTFEVLSSRLKPGCAESAIVNGILDLMSEVEY
Sequences:
>Translated_449_residues MKKQRFIFSAILLIAGISGLTAQTKTPALRVGAAKVDVTPAQSELPRTMEGIHDRLHSRAIVVDNGTTAAAIITLDAGGL SEPLWQAVTQRIERELSIPAKNVMFTATHTHSAPRMSGPAVEQKIFDSVKDAKTKLQPARIAFGTGVSYISVNRNIIDPK TRRWWEGPNYEGPSDKTVAVVRFETLSGEPIAVYYNYAMHAVALGQLDQVSADAPGAASKYIEDSFDDKIVAVWSTGAAG DQNPIYFQQTYDLRDIRIKDYAKRGEDISNAMPPGGQGLNKQDPTVQRLMNQQKQMVLSMGQFLGEEVLHVMRGMDRPES SARIYANQKTVSCPGRQRTDTGRAGNPGTYKDADPVELRLSLLVVGDIAFSGVNGEVFNLIAQRLKKESKFAHTMMATLT NGAARSGYIPNDAAFGYNTFEVLSSRLKPGCAESAIVNGILDLMSEVEY >Mature_449_residues MKKQRFIFSAILLIAGISGLTAQTKTPALRVGAAKVDVTPAQSELPRTMEGIHDRLHSRAIVVDNGTTAAAIITLDAGGL SEPLWQAVTQRIERELSIPAKNVMFTATHTHSAPRMSGPAVEQKIFDSVKDAKTKLQPARIAFGTGVSYISVNRNIIDPK TRRWWEGPNYEGPSDKTVAVVRFETLSGEPIAVYYNYAMHAVALGQLDQVSADAPGAASKYIEDSFDDKIVAVWSTGAAG DQNPIYFQQTYDLRDIRIKDYAKRGEDISNAMPPGGQGLNKQDPTVQRLMNQQKQMVLSMGQFLGEEVLHVMRGMDRPES SARIYANQKTVSCPGRQRTDTGRAGNPGTYKDADPVELRLSLLVVGDIAFSGVNGEVFNLIAQRLKKESKFAHTMMATLT NGAARSGYIPNDAAFGYNTFEVLSSRLKPGCAESAIVNGILDLMSEVEY
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Drosophila melanogaster, GI24651405, Length=285, Percent_Identity=24.5614035087719, Blast_Score=72, Evalue=1e-12, Organism=Drosophila melanogaster, GI24651403, Length=285, Percent_Identity=24.5614035087719, Blast_Score=72, Evalue=1e-12, Organism=Drosophila melanogaster, GI24651401, Length=285, Percent_Identity=24.5614035087719, Blast_Score=72, Evalue=1e-12, Organism=Drosophila melanogaster, GI24651397, Length=285, Percent_Identity=24.5614035087719, Blast_Score=72, Evalue=1e-12, Organism=Drosophila melanogaster, GI24651399, Length=285, Percent_Identity=24.5614035087719, Blast_Score=72, Evalue=1e-12,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 48973; Mature: 48973
Theoretical pI: Translated: 8.56; Mature: 8.56
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 3.1 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKKQRFIFSAILLIAGISGLTAQTKTPALRVGAAKVDVTPAQSELPRTMEGIHDRLHSRA CCCHHHHHHHHHHHHCCCCCCCCCCCCEEEECCEEEECCCCHHHHHHHHHHHHHHHHCCE IVVDNGTTAAAIITLDAGGLSEPLWQAVTQRIERELSIPAKNVMFTATHTHSAPRMSGPA EEEECCCCEEEEEEECCCCCCHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCCCCCCCH VEQKIFDSVKDAKTKLQPARIAFGTGVSYISVNRNIIDPKTRRWWEGPNYEGPSDKTVAV HHHHHHHHHHHHHHHCCCCEEEECCCCEEEEECCCCCCCCHHHCCCCCCCCCCCCCEEEE VRFETLSGEPIAVYYNYAMHAVALGQLDQVSADAPGAASKYIEDSFDDKIVAVWSTGAAG EEEEECCCCEEEEEEHHHHHHHHHCCHHHCCCCCCCHHHHHHHHCCCCCEEEEEECCCCC DQNPIYFQQTYDLRDIRIKDYAKRGEDISNAMPPGGQGLNKQDPTVQRLMNQQKQMVLSM CCCCEEEEECCCCCHHHHHHHHHCCCHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHH GQFLGEEVLHVMRGMDRPESSARIYANQKTVSCPGRQRTDTGRAGNPGTYKDADPVELRL HHHHHHHHHHHHHCCCCCCCCCEEEECCEEEECCCCCCCCCCCCCCCCCCCCCCHHHEEE SLLVVGDIAFSGVNGEVFNLIAQRLKKESKFAHTMMATLTNGAARSGYIPNDAAFGYNTF EEEEEEEHEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHH EVLSSRLKPGCAESAIVNGILDLMSEVEY HHHHHHCCCCCHHHHHHHHHHHHHHHCCC >Mature Secondary Structure MKKQRFIFSAILLIAGISGLTAQTKTPALRVGAAKVDVTPAQSELPRTMEGIHDRLHSRA CCCHHHHHHHHHHHHCCCCCCCCCCCCEEEECCEEEECCCCHHHHHHHHHHHHHHHHCCE IVVDNGTTAAAIITLDAGGLSEPLWQAVTQRIERELSIPAKNVMFTATHTHSAPRMSGPA EEEECCCCEEEEEEECCCCCCHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCCCCCCCH VEQKIFDSVKDAKTKLQPARIAFGTGVSYISVNRNIIDPKTRRWWEGPNYEGPSDKTVAV HHHHHHHHHHHHHHHCCCCEEEECCCCEEEEECCCCCCCCHHHCCCCCCCCCCCCCEEEE VRFETLSGEPIAVYYNYAMHAVALGQLDQVSADAPGAASKYIEDSFDDKIVAVWSTGAAG EEEEECCCCEEEEEEHHHHHHHHHCCHHHCCCCCCCHHHHHHHHCCCCCEEEEEECCCCC DQNPIYFQQTYDLRDIRIKDYAKRGEDISNAMPPGGQGLNKQDPTVQRLMNQQKQMVLSM CCCCEEEEECCCCCHHHHHHHHHCCCHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHH GQFLGEEVLHVMRGMDRPESSARIYANQKTVSCPGRQRTDTGRAGNPGTYKDADPVELRL HHHHHHHHHHHHHCCCCCCCCCEEEECCEEEECCCCCCCCCCCCCCCCCCCCCCHHHEEE SLLVVGDIAFSGVNGEVFNLIAQRLKKESKFAHTMMATLTNGAARSGYIPNDAAFGYNTF EEEEEEEHEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHH EVLSSRLKPGCAESAIVNGILDLMSEVEY HHHHHHCCCCCHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA