| Definition | Candidatus Solibacter usitatus Ellin6076 chromosome, complete genome. |
|---|---|
| Accession | NC_008536 |
| Length | 9,965,640 |
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The map label for this gene is 116621151
Identifier: 116621151
GI number: 116621151
Start: 2574602
End: 2575951
Strand: Direct
Name: 116621151
Synonym: Acid_2032
Alternate gene names: NA
Gene position: 2574602-2575951 (Clockwise)
Preceding gene: 116621150
Following gene: 116621152
Centisome position: 25.83
GC content: 63.85
Gene sequence:
>1350_bases ATGATCGTCTCCAAGAAATCCCTGCCTCGCCGCACCTTTCTGCGCGGCCTCGGCACGACCCTGGCGCTCCCTTTGCTGGA TTCCATGATTCCGGCGCTTGGTTCGGCAGCGGCCGCCAAACCGGTGGTCCGCCTTGGCTTCGTTTATCACCCGGTCGGCA TGATCCTGGACAAGTGGATTCCGGCCACCGAAGGCACCGGGTTTGAGATCACGCCGACCATGAAGGCGCTCGAGCCCTTC CGCGAGAACATGGTGGTCTTCACCGGCCTGGCCCAAGTCAACGGGCGCGCGCTCGGCGATGGCGCCGGCGACCATGCCCG CGAAGGCGCCACGTGGCTGACCGGCGTCCACCCCAAGAAGACCGAAGGCGTCGGCATCCGCGCCGGCATCTCCGCCGATC AGCTGGCCGCGCGGGAACTCGGCAAGAACACGCAGCTGGCTTCGCTCGAGCTCGGACTCGAAGGCCCGTCGCTCGCCGGC GGCTGCGATTCCGGTTATAGCTGCGCCTACACCAACACCGTGTCCTGGCGCAGCCCCACCAATCCGCTGCCGGTCGAAGT CAATCCGCGCAACGTGTTCGAGCGCCTCTTCGGGGATGGCGACAGCACCGAGCCCGCGGCCCGGCTGGCCATGCTCAAAG AGCAGCGCAGCATCCTCGATTATGTTTCCGGCAGCATCGATCGCCTCGAGAACAAGATCGGCAAAGGCGACCGCGCCAAG CTTACCGAGTATCTCGATTCCATCCGCGATATCGAGCGCCGCATTCAGAAGGCCGAGCAGCAGAGCGCGTCCATGAAGAT CCCCAGCATGGAGCGCCCCACTTCCGTTCCCGAGGAGTTTCAAGATCACGCGCGCCTCATGATGGACATGCAGGTGATCG CGTTCCAGACCGATATGACGCGCGTCATAAGCTTTATGCTGGGCCGCGCGGGCAGCAACCGCCCCTATCGCAACATCGGC ATCTCCGACGGCCACCATTCGATCACGCATCACCAGGGCGACCCGGTGAAGATCGCCAACGTCGCCAAGATCGACGCCTT CCTGGTGGAGACCTTCTCGTATTTCCTCGAGAAGCTCAAGGCCACCCCGGATGGTGACGGCAATCTGCTCGACCACAGCC TGATTCTCTACGGCAGCGGTCTTGGCGATGCCAACATCCACACTCATCACGAGCTCCCCACCGCCATGTTCGGAGGGGGC GCGGGCCAGCTCAGAGGCGGCCGCCACCTGCATTATCCGAAGGACACTCCGCTCAACAACCTGCTTGTCAGCATGCTGGA AATGGGCGCCGTCCGCACCGAAAACTTTGGCGACGCCACCGGCGAACTCGCCCACCTCACGGGCGTATGA
Upstream 100 bases:
>100_bases CGATCATTCGCCAGGCCGCCCGCGAGAATTACCGCATGTCGGCCTTCGTCGCGGCCATAGTCAACAGCACGCCCTTTCAG ATGAGGAGGACTCCGGAACC
Downstream 100 bases:
>100_bases AGCGCGCGGTGAACACAATGATTAGCGGACGCTCCCTAACGGTCGCGGCTCGGATATCAGAGCCGCGACAGACATCAGAG CCGCGACCGTTAGGGAGCGT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 449; Mature: 449
Protein sequence:
>449_residues MIVSKKSLPRRTFLRGLGTTLALPLLDSMIPALGSAAAAKPVVRLGFVYHPVGMILDKWIPATEGTGFEITPTMKALEPF RENMVVFTGLAQVNGRALGDGAGDHAREGATWLTGVHPKKTEGVGIRAGISADQLAARELGKNTQLASLELGLEGPSLAG GCDSGYSCAYTNTVSWRSPTNPLPVEVNPRNVFERLFGDGDSTEPAARLAMLKEQRSILDYVSGSIDRLENKIGKGDRAK LTEYLDSIRDIERRIQKAEQQSASMKIPSMERPTSVPEEFQDHARLMMDMQVIAFQTDMTRVISFMLGRAGSNRPYRNIG ISDGHHSITHHQGDPVKIANVAKIDAFLVETFSYFLEKLKATPDGDGNLLDHSLILYGSGLGDANIHTHHELPTAMFGGG AGQLRGGRHLHYPKDTPLNNLLVSMLEMGAVRTENFGDATGELAHLTGV
Sequences:
>Translated_449_residues MIVSKKSLPRRTFLRGLGTTLALPLLDSMIPALGSAAAAKPVVRLGFVYHPVGMILDKWIPATEGTGFEITPTMKALEPF RENMVVFTGLAQVNGRALGDGAGDHAREGATWLTGVHPKKTEGVGIRAGISADQLAARELGKNTQLASLELGLEGPSLAG GCDSGYSCAYTNTVSWRSPTNPLPVEVNPRNVFERLFGDGDSTEPAARLAMLKEQRSILDYVSGSIDRLENKIGKGDRAK LTEYLDSIRDIERRIQKAEQQSASMKIPSMERPTSVPEEFQDHARLMMDMQVIAFQTDMTRVISFMLGRAGSNRPYRNIG ISDGHHSITHHQGDPVKIANVAKIDAFLVETFSYFLEKLKATPDGDGNLLDHSLILYGSGLGDANIHTHHELPTAMFGGG AGQLRGGRHLHYPKDTPLNNLLVSMLEMGAVRTENFGDATGELAHLTGV >Mature_449_residues MIVSKKSLPRRTFLRGLGTTLALPLLDSMIPALGSAAAAKPVVRLGFVYHPVGMILDKWIPATEGTGFEITPTMKALEPF RENMVVFTGLAQVNGRALGDGAGDHAREGATWLTGVHPKKTEGVGIRAGISADQLAARELGKNTQLASLELGLEGPSLAG GCDSGYSCAYTNTVSWRSPTNPLPVEVNPRNVFERLFGDGDSTEPAARLAMLKEQRSILDYVSGSIDRLENKIGKGDRAK LTEYLDSIRDIERRIQKAEQQSASMKIPSMERPTSVPEEFQDHARLMMDMQVIAFQTDMTRVISFMLGRAGSNRPYRNIG ISDGHHSITHHQGDPVKIANVAKIDAFLVETFSYFLEKLKATPDGDGNLLDHSLILYGSGLGDANIHTHHELPTAMFGGG AGQLRGGRHLHYPKDTPLNNLLVSMLEMGAVRTENFGDATGELAHLTGV
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 48647; Mature: 48647
Theoretical pI: Translated: 6.94; Mature: 6.94
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 3.6 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 3.6 %Met (Mature Protein) 4.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIVSKKSLPRRTFLRGLGTTLALPLLDSMIPALGSAAAAKPVVRLGFVYHPVGMILDKWI CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCC PATEGTGFEITPTMKALEPFRENMVVFTGLAQVNGRALGDGAGDHAREGATWLTGVHPKK CCCCCCCEEECCCHHHHHHHHCCEEEEEEEHHHCCEECCCCCCCHHHCCCCEEECCCCCC TEGVGIRAGISADQLAARELGKNTQLASLELGLEGPSLAGGCDSGYSCAYTNTVSWRSPT CCCCCEEECCCHHHHHHHHHCCCCCEEEEEECCCCCCCCCCCCCCCCEEEECCCCCCCCC NPLPVEVNPRNVFERLFGDGDSTEPAARLAMLKEQRSILDYVSGSIDRLENKIGKGDRAK CCCCEEECHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCHHHH LTEYLDSIRDIERRIQKAEQQSASMKIPSMERPTSVPEEFQDHARLMMDMQVIAFQTDMT HHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH RVISFMLGRAGSNRPYRNIGISDGHHSITHHQGDPVKIANVAKIDAFLVETFSYFLEKLK HHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEHHHHHHHHHHHHHHHHHHHHC ATPDGDGNLLDHSLILYGSGLGDANIHTHHELPTAMFGGGAGQLRGGRHLHYPKDTPLNN CCCCCCCCEECCEEEEEECCCCCCCCCCCCCCCHHHHCCCCCCCCCCCCCCCCCCCCHHH LLVSMLEMGAVRTENFGDATGELAHLTGV HHHHHHHHCCCCCCCCCCCCCCCHHHCCC >Mature Secondary Structure MIVSKKSLPRRTFLRGLGTTLALPLLDSMIPALGSAAAAKPVVRLGFVYHPVGMILDKWI CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCC PATEGTGFEITPTMKALEPFRENMVVFTGLAQVNGRALGDGAGDHAREGATWLTGVHPKK CCCCCCCEEECCCHHHHHHHHCCEEEEEEEHHHCCEECCCCCCCHHHCCCCEEECCCCCC TEGVGIRAGISADQLAARELGKNTQLASLELGLEGPSLAGGCDSGYSCAYTNTVSWRSPT CCCCCEEECCCHHHHHHHHHCCCCCEEEEEECCCCCCCCCCCCCCCCEEEECCCCCCCCC NPLPVEVNPRNVFERLFGDGDSTEPAARLAMLKEQRSILDYVSGSIDRLENKIGKGDRAK CCCCEEECHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCHHHH LTEYLDSIRDIERRIQKAEQQSASMKIPSMERPTSVPEEFQDHARLMMDMQVIAFQTDMT HHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH RVISFMLGRAGSNRPYRNIGISDGHHSITHHQGDPVKIANVAKIDAFLVETFSYFLEKLK HHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEHHHHHHHHHHHHHHHHHHHHC ATPDGDGNLLDHSLILYGSGLGDANIHTHHELPTAMFGGGAGQLRGGRHLHYPKDTPLNN CCCCCCCCEECCEEEEEECCCCCCCCCCCCCCCHHHHCCCCCCCCCCCCCCCCCCCCHHH LLVSMLEMGAVRTENFGDATGELAHLTGV HHHHHHHHCCCCCCCCCCCCCCCHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA