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The map label for this gene is yhjL [C]

Identifier: 116621110

GI number: 116621110

Start: 2517914

End: 2519113

Strand: Direct

Name: yhjL [C]

Synonym: Acid_1991

Alternate gene names: 116621110

Gene position: 2517914-2519113 (Clockwise)

Preceding gene: 116621109

Following gene: 116621111

Centisome position: 25.27

GC content: 65.17

Gene sequence:

>1200_bases
GTGCTGGCCGCCGCTCAATTCCTGGGCGCGCAGCAGCCCCAACTTCGTGACCTGGAATCACAGGCGGCGGCCGCACGATC
GCGTGGCGACGCGCCCGGCGCGCTCGCCCTATGGGAGCGCGCCGCCGCGCTCGCGCCGCAATCGGCGCACGTTCAGGACG
AGATCGGCTTTCTGCTCGCGGTTCTCAACCGCCAGGAGGAAGCTCTCCGCCATTTCGAGCAGGCGATCGCGCTGGACCCC
AAGTTCGCTCCCGCGCAATATCATCTAGGCGTCGCCCGGTGGCTGGCCAACGATCCAGCGCAGTCCATCCCTCACCTGCA
GAGCGCCGCGGCGCTCGAACCGAATAACTTCGAGTACCGCTTCTACCTGGGCCAGGCGCTCAACGCCACGTCGCAATTTT
CCGCGGCGCTTCCCCAGTTCACGGCCGCCACGGCGCTGAATCCGAAATCTTCCGAAGCCTGGAATCAACTCGGGCTCTCG
CGCCAGCGCACCGGCGACACGGCGGGCGCGATCAATGCCTACCGGCGCGCCGTCACGCTCTCCCCCGCCAACCTGGACGC
GCGCAACAATCTGGGCTTCGTGTTGGTCAATAGCGGACGCGCCGACGAGGGGCTCGCCCAATTCGAAAAGATTCTGGCGG
CGGACCCTGCCAACAATATGGCGCGAGTGAATGCCGGCTTCGCGTACCTGCAAAAGGCCGATCTCGACCGGGCCGCGGTC
GAGTTTCGCGAGGTGATCCGGCGCGACCCCGAGTCCGCCATCGCCCACTACGATCTTGGGATCGCGCTCAAGCAGAAGGA
CGACCTGGAAGCGGCCAAACTCGAGCTTGCTCTGGCGCTGAAGCTCGATCCGCAACTCGCGGAGGCTCACTACACGCTCG
GCATCATCCACTGGCAAAGCGGGGATTTCGACCAGGCCGCCCGTGAGATGCGCGCCGCCATCGCGATCAATCCGGCGTAT
GGCGGCGCGTACTTCATGCTGGGCACTGCGCTCAAACAGAATGGGGAACTCGAAGCCGCGGAGACGGCGCTGCGCGCTGC
CATCCGGTACGATCCAGCCAATCCCGGACCGTACAATACGCTCGCTCAGTTGTTGCGCCAGAAAGGCGACCTCGAAGGCA
GCCGCGCGGTATTCCAGGAAGGCGCGAAGGCCAAACTGCAGAAGGAAGTGGAACTCGGCAAGATGCTGCAGAAGAAGTAG

Upstream 100 bases:

>100_bases
TATTTGCTCTCGCAGGACTTGCTCAAATGAGAAAGTGGCAACTCGGTCTCCGCGTTCAGTTCTGATAGGGAGCAGGCCCC
GTCCCCTCTCCCTCGTTCTC

Downstream 100 bases:

>100_bases
CGAGACTTCCAGGCGCGAATTGCGCAGAATAAGACCATGGCGTTGAATCGGGCGGTGCTGCTGGCGGCTTGCGTTGGCCT
TACATGGGGCCAATCAATGG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 399; Mature: 399

Protein sequence:

>399_residues
MLAAAQFLGAQQPQLRDLESQAAAARSRGDAPGALALWERAAALAPQSAHVQDEIGFLLAVLNRQEEALRHFEQAIALDP
KFAPAQYHLGVARWLANDPAQSIPHLQSAAALEPNNFEYRFYLGQALNATSQFSAALPQFTAATALNPKSSEAWNQLGLS
RQRTGDTAGAINAYRRAVTLSPANLDARNNLGFVLVNSGRADEGLAQFEKILAADPANNMARVNAGFAYLQKADLDRAAV
EFREVIRRDPESAIAHYDLGIALKQKDDLEAAKLELALALKLDPQLAEAHYTLGIIHWQSGDFDQAAREMRAAIAINPAY
GGAYFMLGTALKQNGELEAAETALRAAIRYDPANPGPYNTLAQLLRQKGDLEGSRAVFQEGAKAKLQKEVELGKMLQKK

Sequences:

>Translated_399_residues
MLAAAQFLGAQQPQLRDLESQAAAARSRGDAPGALALWERAAALAPQSAHVQDEIGFLLAVLNRQEEALRHFEQAIALDP
KFAPAQYHLGVARWLANDPAQSIPHLQSAAALEPNNFEYRFYLGQALNATSQFSAALPQFTAATALNPKSSEAWNQLGLS
RQRTGDTAGAINAYRRAVTLSPANLDARNNLGFVLVNSGRADEGLAQFEKILAADPANNMARVNAGFAYLQKADLDRAAV
EFREVIRRDPESAIAHYDLGIALKQKDDLEAAKLELALALKLDPQLAEAHYTLGIIHWQSGDFDQAAREMRAAIAINPAY
GGAYFMLGTALKQNGELEAAETALRAAIRYDPANPGPYNTLAQLLRQKGDLEGSRAVFQEGAKAKLQKEVELGKMLQKK
>Mature_399_residues
MLAAAQFLGAQQPQLRDLESQAAAARSRGDAPGALALWERAAALAPQSAHVQDEIGFLLAVLNRQEEALRHFEQAIALDP
KFAPAQYHLGVARWLANDPAQSIPHLQSAAALEPNNFEYRFYLGQALNATSQFSAALPQFTAATALNPKSSEAWNQLGLS
RQRTGDTAGAINAYRRAVTLSPANLDARNNLGFVLVNSGRADEGLAQFEKILAADPANNMARVNAGFAYLQKADLDRAAV
EFREVIRRDPESAIAHYDLGIALKQKDDLEAAKLELALALKLDPQLAEAHYTLGIIHWQSGDFDQAAREMRAAIAINPAY
GGAYFMLGTALKQNGELEAAETALRAAIRYDPANPGPYNTLAQLLRQKGDLEGSRAVFQEGAKAKLQKEVELGKMLQKK

Specific function: Unknown

COG id: COG0457

COG function: function code R; FOG: TPR repeat

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 9 TPR repeats [H]

Homologues:

Organism=Homo sapiens, GI32307148, Length=360, Percent_Identity=29.1666666666667, Blast_Score=124, Evalue=2e-28,
Organism=Homo sapiens, GI32307150, Length=360, Percent_Identity=29.1666666666667, Blast_Score=124, Evalue=2e-28,
Organism=Homo sapiens, GI25952122, Length=386, Percent_Identity=26.4248704663212, Blast_Score=89, Evalue=5e-18,
Organism=Homo sapiens, GI310131789, Length=227, Percent_Identity=25.5506607929515, Blast_Score=70, Evalue=3e-12,
Organism=Homo sapiens, GI310123097, Length=227, Percent_Identity=25.5506607929515, Blast_Score=70, Evalue=3e-12,
Organism=Homo sapiens, GI310110582, Length=227, Percent_Identity=25.5506607929515, Blast_Score=70, Evalue=3e-12,
Organism=Homo sapiens, GI301336134, Length=397, Percent_Identity=21.9143576826196, Blast_Score=68, Evalue=1e-11,
Organism=Homo sapiens, GI83415184, Length=397, Percent_Identity=21.9143576826196, Blast_Score=68, Evalue=1e-11,
Organism=Homo sapiens, GI118766330, Length=248, Percent_Identity=25, Blast_Score=66, Evalue=5e-11,
Organism=Homo sapiens, GI118766328, Length=248, Percent_Identity=25, Blast_Score=66, Evalue=6e-11,
Organism=Caenorhabditis elegans, GI115532690, Length=313, Percent_Identity=27.1565495207668, Blast_Score=110, Evalue=1e-24,
Organism=Caenorhabditis elegans, GI115532692, Length=313, Percent_Identity=27.1565495207668, Blast_Score=110, Evalue=1e-24,
Organism=Caenorhabditis elegans, GI71987213, Length=240, Percent_Identity=26.6666666666667, Blast_Score=74, Evalue=1e-13,
Organism=Caenorhabditis elegans, GI25147174, Length=252, Percent_Identity=25.3968253968254, Blast_Score=65, Evalue=4e-11,
Organism=Saccharomyces cerevisiae, GI6319387, Length=278, Percent_Identity=23.7410071942446, Blast_Score=74, Evalue=5e-14,
Organism=Drosophila melanogaster, GI17647755, Length=313, Percent_Identity=27.4760383386581, Blast_Score=110, Evalue=1e-24,
Organism=Drosophila melanogaster, GI24585827, Length=313, Percent_Identity=27.4760383386581, Blast_Score=110, Evalue=1e-24,
Organism=Drosophila melanogaster, GI24585829, Length=313, Percent_Identity=27.4760383386581, Blast_Score=110, Evalue=1e-24,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001440
- InterPro:   IPR013026
- InterPro:   IPR011990
- InterPro:   IPR013105
- InterPro:   IPR019734 [H]

Pfam domain/function: PF00515 TPR_1; PF07719 TPR_2 [H]

EC number: NA

Molecular weight: Translated: 43261; Mature: 43261

Theoretical pI: Translated: 6.42; Mature: 6.42

Prosite motif: PS50005 TPR L=RR ; PS50293 TPR_REGION

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
1.3 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
1.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLAAAQFLGAQQPQLRDLESQAAAARSRGDAPGALALWERAAALAPQSAHVQDEIGFLLA
CCCHHHHHCCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCCCCHHHHHHHHHH
VLNRQEEALRHFEQAIALDPKFAPAQYHLGVARWLANDPAQSIPHLQSAAALEPNNFEYR
HHCCHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCHHHHCCCHHHHCCCCCCCCEEE
FYLGQALNATSQFSAALPQFTAATALNPKSSEAWNQLGLSRQRTGDTAGAINAYRRAVTL
EEECCHHCCHHHHHHHCCCHHHHHCCCCCCHHHHHHHCCCHHCCCCCHHHHHHHHHEEEE
SPANLDARNNLGFVLVNSGRADEGLAQFEKILAADPANNMARVNAGFAYLQKADLDRAAV
CCCCCCCCCCCCEEEEECCCCCHHHHHHHHHHHCCCCCCCEEECCCHHHHHHHCCHHHHH
EFREVIRRDPESAIAHYDLGIALKQKDDLEAAKLELALALKLDPQLAEAHYTLGIIHWQS
HHHHHHHCCHHHHHHHHCCCEEECCCCCCHHHHEEEEEEEECCHHHHHCEEEEEEEEECC
GDFDQAAREMRAAIAINPAYGGAYFMLGTALKQNGELEAAETALRAAIRYDPANPGPYNT
CCHHHHHHHHHHHEEECCCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCCCCHHH
LAQLLRQKGDLEGSRAVFQEGAKAKLQKEVELGKMLQKK
HHHHHHHHCCCCCHHHHHHCCHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MLAAAQFLGAQQPQLRDLESQAAAARSRGDAPGALALWERAAALAPQSAHVQDEIGFLLA
CCCHHHHHCCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCCCCHHHHHHHHHH
VLNRQEEALRHFEQAIALDPKFAPAQYHLGVARWLANDPAQSIPHLQSAAALEPNNFEYR
HHCCHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCHHHHCCCHHHHCCCCCCCCEEE
FYLGQALNATSQFSAALPQFTAATALNPKSSEAWNQLGLSRQRTGDTAGAINAYRRAVTL
EEECCHHCCHHHHHHHCCCHHHHHCCCCCCHHHHHHHCCCHHCCCCCHHHHHHHHHEEEE
SPANLDARNNLGFVLVNSGRADEGLAQFEKILAADPANNMARVNAGFAYLQKADLDRAAV
CCCCCCCCCCCCEEEEECCCCCHHHHHHHHHHHCCCCCCCEEECCCHHHHHHHCCHHHHH
EFREVIRRDPESAIAHYDLGIALKQKDDLEAAKLELALALKLDPQLAEAHYTLGIIHWQS
HHHHHHHCCHHHHHHHHCCCEEECCCCCCHHHHEEEEEEEECCHHHHHCEEEEEEEEECC
GDFDQAAREMRAAIAINPAYGGAYFMLGTALKQNGELEAAETALRAAIRYDPANPGPYNT
CCHHHHHHHHHHHEEECCCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCCCCHHH
LAQLLRQKGDLEGSRAVFQEGAKAKLQKEVELGKMLQKK
HHHHHHHHCCCCCHHHHHHCCHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 2105307 [H]