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The map label for this gene is yihO [C]

Identifier: 116621105

GI number: 116621105

Start: 2508442

End: 2509959

Strand: Direct

Name: yihO [C]

Synonym: Acid_1986

Alternate gene names: 116621105

Gene position: 2508442-2509959 (Clockwise)

Preceding gene: 116621104

Following gene: 116621106

Centisome position: 25.17

GC content: 56.06

Gene sequence:

>1518_bases
ATGATGCAAGCAACGCGCCAACAAAAGTCATCCACGTCCGCACACGGCCTGAGTTCCCGCGTCAAGATCATGTACGGCGT
CGGTGAGATCGCGAACGCTGTTAAGACGGTTACGTTCGCACTCTATGGTTTGTTTTTCGCGACCGTAGTCAAAGGCCTGC
CCGGAACATGGATCGGCGTTGTTGCGTTCGTCTCCATGCTCTGGGACGCGTTTATGGATCCATACGTCGGTCATCTCACC
GATGGCGCTCAGGCCAAGTCGAAACGATTCAAGTTCATGCTGGCCGGCATTCTTACGATGGGGGCCGGTTTGTGGGGCTT
CTTCAGCCCTCCCCATGGTCTCTCCACATTTCCTCTTTTTGCATGGCTGCTCATGGCCAGCTTTTTGTTACGTACCGCGA
CTTCAATGTTCAGTATTCCCTACTACGCTTTGGGAGTTAATTTGAGCCGCGACTACCATGAGCGCACCTCCATTACTGGC
ATCCGGAACATGGCCAGTGCGATCGGGACTTTGCTTGCAGCCTCGCTCTCCTTTATCGTTTTCTTCCGGGAAAAAGTGGC
GGGAGTCGATCCCAAGCTCGACCCCACGGCTTATAGCGCGATGGGATTGACCTTCGGTGTGATGATGACGGCAGCGGCGT
TCACTGCATGGTCGGGTACGCTACCTTTGCGGCATTCCCTGGAAGGCGGCTCGCGCCCAATGCAGCAAGCGCCGGGAAAT
TTCTTGGGAAGCATGCGGGAGTCGCTGCGGAACCCATCATTTCGGATCATACTGACTTCCTTTTTCCTCGTTGTTGTCGG
CCTTGCCGTCAATGCCTCACTACTGATTCATTACCTGAAATACTATGTGGAAATCAATGGAAGCGTGGCGCTCGGCAGCA
CACAAGCTGCCTTCTACACGGCAGGATTGCTCGGGACGGTGTTCTGGCTGCGGATCTCCAGGAAATTCGATAAGCACCAT
CTATATATATTCTCCGCAGCCGTAACCGCCGTGCTCATGCTCGGAGGCCTGGCGCTTTTCGGACAAGGCCATCCGCTCGG
CACCGGCAACATTCGCCCCTTGCTGATGGGGTATGGCTGCGCCGGTTTTTTCGGTTGCATGCTTTGGTTCTTGCCGCCCT
CGATGCTGGCCGATGTGACGGATGAGAGCGAACTGATTACAGGACGGCGTCGCGAGGGAGCGCTCTTTGGCATGCTTGGA
TTTTGCAAACAAGTCGCGACCGGCGTAGCGATACTGCTCGCAGGCGGACTGCTGGACCGGTTTGTCGGTCCGGTCGCGGG
AAAATCCCAGTTATCCGGCGTTGCCGTATTTCGCATCGGCATCGTATACAGCGTCGTTCCTGCAGCCCTGTTCACGGCGG
CTGCAATCCTAATGCTTAACTACAAGCTGACTCGCTCGCGTGTTGAACTGATTCAGGTAGAGCTGCGGCAGAGGCGTACC
GCGAATGATGCCGCTGCAGAGGGCGAACTTACGGCGGTCGAAATCTCAGGCGAGGAGCAGGTTAAGGAGATCGGATGA

Upstream 100 bases:

>100_bases
GGAAGGCGTGGCAAACGCCGTCGCCGCCTTTGAACGCCATATATGCACAAGTTCACCGGGCATGTTCGCCCGGGCAGGGA
AGTAACCGGATTTAAGCTAC

Downstream 100 bases:

>100_bases
GAAAATCTGCCTCAACTCAATATGATGCTGCATTCTATCGAAGGCAGCGCTCTGGCTCATCTGCTTCCGCATCGGAAGTC
GTCCCCCTAGTGATTGATCT

Product: Na+/melibiose symporter-like protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 505; Mature: 505

Protein sequence:

>505_residues
MMQATRQQKSSTSAHGLSSRVKIMYGVGEIANAVKTVTFALYGLFFATVVKGLPGTWIGVVAFVSMLWDAFMDPYVGHLT
DGAQAKSKRFKFMLAGILTMGAGLWGFFSPPHGLSTFPLFAWLLMASFLLRTATSMFSIPYYALGVNLSRDYHERTSITG
IRNMASAIGTLLAASLSFIVFFREKVAGVDPKLDPTAYSAMGLTFGVMMTAAAFTAWSGTLPLRHSLEGGSRPMQQAPGN
FLGSMRESLRNPSFRIILTSFFLVVVGLAVNASLLIHYLKYYVEINGSVALGSTQAAFYTAGLLGTVFWLRISRKFDKHH
LYIFSAAVTAVLMLGGLALFGQGHPLGTGNIRPLLMGYGCAGFFGCMLWFLPPSMLADVTDESELITGRRREGALFGMLG
FCKQVATGVAILLAGGLLDRFVGPVAGKSQLSGVAVFRIGIVYSVVPAALFTAAAILMLNYKLTRSRVELIQVELRQRRT
ANDAAAEGELTAVEISGEEQVKEIG

Sequences:

>Translated_505_residues
MMQATRQQKSSTSAHGLSSRVKIMYGVGEIANAVKTVTFALYGLFFATVVKGLPGTWIGVVAFVSMLWDAFMDPYVGHLT
DGAQAKSKRFKFMLAGILTMGAGLWGFFSPPHGLSTFPLFAWLLMASFLLRTATSMFSIPYYALGVNLSRDYHERTSITG
IRNMASAIGTLLAASLSFIVFFREKVAGVDPKLDPTAYSAMGLTFGVMMTAAAFTAWSGTLPLRHSLEGGSRPMQQAPGN
FLGSMRESLRNPSFRIILTSFFLVVVGLAVNASLLIHYLKYYVEINGSVALGSTQAAFYTAGLLGTVFWLRISRKFDKHH
LYIFSAAVTAVLMLGGLALFGQGHPLGTGNIRPLLMGYGCAGFFGCMLWFLPPSMLADVTDESELITGRRREGALFGMLG
FCKQVATGVAILLAGGLLDRFVGPVAGKSQLSGVAVFRIGIVYSVVPAALFTAAAILMLNYKLTRSRVELIQVELRQRRT
ANDAAAEGELTAVEISGEEQVKEIG
>Mature_505_residues
MMQATRQQKSSTSAHGLSSRVKIMYGVGEIANAVKTVTFALYGLFFATVVKGLPGTWIGVVAFVSMLWDAFMDPYVGHLT
DGAQAKSKRFKFMLAGILTMGAGLWGFFSPPHGLSTFPLFAWLLMASFLLRTATSMFSIPYYALGVNLSRDYHERTSITG
IRNMASAIGTLLAASLSFIVFFREKVAGVDPKLDPTAYSAMGLTFGVMMTAAAFTAWSGTLPLRHSLEGGSRPMQQAPGN
FLGSMRESLRNPSFRIILTSFFLVVVGLAVNASLLIHYLKYYVEINGSVALGSTQAAFYTAGLLGTVFWLRISRKFDKHH
LYIFSAAVTAVLMLGGLALFGQGHPLGTGNIRPLLMGYGCAGFFGCMLWFLPPSMLADVTDESELITGRRREGALFGMLG
FCKQVATGVAILLAGGLLDRFVGPVAGKSQLSGVAVFRIGIVYSVVPAALFTAAAILMLNYKLTRSRVELIQVELRQRRT
ANDAAAEGELTAVEISGEEQVKEIG

Specific function: Unknown

COG id: COG2211

COG function: function code G; Na+/melibiose symporter and related transporters

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the sodium:galactoside symporter (TC 2.A.2) family [H]

Homologues:

Organism=Escherichia coli, GI145693206, Length=481, Percent_Identity=24.5322245322245, Blast_Score=67, Evalue=2e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR016196
- InterPro:   IPR001927
- InterPro:   IPR018043 [H]

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 54478; Mature: 54478

Theoretical pI: Translated: 10.09; Mature: 10.09

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
4.2 %Met     (Translated Protein)
4.8 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
4.2 %Met     (Mature Protein)
4.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure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CCCCCCCCCEEEEEECCHHHHHHCC
>Mature Secondary Structure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CCCCCCCCCEEEEEECCHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 8905231 [H]