| Definition | Candidatus Solibacter usitatus Ellin6076 chromosome, complete genome. |
|---|---|
| Accession | NC_008536 |
| Length | 9,965,640 |
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The map label for this gene is 116621088
Identifier: 116621088
GI number: 116621088
Start: 2476598
End: 2477818
Strand: Direct
Name: 116621088
Synonym: Acid_1969
Alternate gene names: NA
Gene position: 2476598-2477818 (Clockwise)
Preceding gene: 116621087
Following gene: 116621091
Centisome position: 24.85
GC content: 59.79
Gene sequence:
>1221_bases ATGCGTAAATTACTTCGACCTATTGTCAATACCGTACTCTTTCTGCCGTGGCTGGCGGCGGCTCAAGAACGGTCCGTTGC GCTTAGAGTGGCGACGGCGTTCGACGGTAAGGGCAAGATCATCCACAACACGACGATCGTCGTCCAGGGAACGAAGATCT TACGGATCGGGGGAACCGTGCCGGCGGGCGCGATCACCTATGACCTGACGGACCTGACGGTCTCACCCGGCTGGATCGAC ACGCATTCCCACGTTATGTACCATTTCGGTGACGATGCGCGGAACGGCGGCAGGGGCGAGCCTCCGGTCCACGCGATGTT GCGTGGCGTGGACAACGCAATCTTGACACTCGAGGCGGGATTCACCACTATTCAAAGTCCCGGGAGTCTGCAGGACAAGG AACTGCGCGACGCCATCGCACGGGGCGTCATTCCAGGCCCGCGCCTGCTGACTTCCTTACAGCCGCTGATGGAGAACAGC GGACCCCCTGAGAAACTCCGCGAGTTGGTGCGCCAGAGAAAGCAGGACGGAGCCGACTTCATCAAGCTCTTCGCCTCGAA AAGCATTCGCGAGGGCGGTGCTCAGACGATGACCGATGAGCAACTTCAAGCAGCGTGCGGAGAAGCGAAGGCGTTGGGGC TGCGGACCTTGGTGCATGCCCACTCGGCGGAATCGGCCAAGGCGGCCACGCTGGCGGGATGCACCTCCATCGAGCACGGC GCGTATGTCACCGACGAAGTATTCGACTTAATGGCGAAGCGCGGGACGTACTATGATCCGAACATCGGCCTGGTCTTGCA GAACTACCTCGAAAACAAATCGAAGTTTCTGGGGAGTGGCAATTACAACGAGGAAGGTTTTGCATTTATGGAGAAGGGCC TCACGATCACGCGCGACACGTTCAAAAGGGCCCTGACCCACAAGGACCTGAAGATCGTGTACGGCACGGATGCGGTTGCC GGCGCCCACGGGAGGAACTACGAAGAGTTCATCGTTCGGGTGCGCGACGGAGGCCAGGCGCCTATGGCTGCGATCGAGTC CGCCACGTCCATTTCGGCGGAATCCATGAACCTGCAAGATCAAATCGGCGCGCTCGCTCCGGGCATGCAGGCGGACATCA TTGCGTTCGATGGGAATCCGCTGCAGGACGTAACCGCCGTGCGGCGCGTAGTGTTTGTGATGAAGGGCGGCACGGTATTT GAGAGTCGACTGGGACACTAG
Upstream 100 bases:
>100_bases GGCTTTGGCGTGATTTCCAGCACCTCGGTCCCGGCCAACCGCCAGGCGAGCAGCCGCTGGATCATGTTCGGAGCGCGACT CGAGTTCTAAAGGGGATGGG
Downstream 100 bases:
>100_bases CGTTCGGAACGGTCGGATCAAAGATGGACCGGTGATTGCCACTGTGCCATACGCCTCGCCGGTGCTTAACGGACGCCCTT CACCACGTCCGCCGGGCAGC
Product: amidohydrolase
Products: NA
Alternate protein names: Xaa-Pro Dipeptidase; Prolidase; Amidohydrolase Family Protein; Secreted Hydrolase; Imidazolonepropionase; Xaa-Pro Dipeptidase Family; Metal-Dependent Amidohydrolase; M38 Family Peptidase; Aryldialkylphosphatase Related Protein; Parathion Hydrolase; Amidohydrolase Family; Amidohydrolase Domain Protein; Pro-Hyp Dipeptidase; Dipeptidase; Aryldialkylphosphatase; Imidazolonepropionase Related Amidohydrolase; Metal-Dependent Hydrolase; Organophosphate Acid Anhydrase; Exported Adenine Deaminase-Like Amidohydrolase; Aryldialkylphosphatase-Related Protein; M38 Familypeptidase; M38 Family Protein; Amidohydrolase Imidazolonepropionase; ABC-2 Type Transporter; Xaa-Arg/Lys Peptidase; Amidohydrolase Domain-Containing Protein; X-Pro Dipeptidase
Number of amino acids: Translated: 406; Mature: 406
Protein sequence:
>406_residues MRKLLRPIVNTVLFLPWLAAAQERSVALRVATAFDGKGKIIHNTTIVVQGTKILRIGGTVPAGAITYDLTDLTVSPGWID THSHVMYHFGDDARNGGRGEPPVHAMLRGVDNAILTLEAGFTTIQSPGSLQDKELRDAIARGVIPGPRLLTSLQPLMENS GPPEKLRELVRQRKQDGADFIKLFASKSIREGGAQTMTDEQLQAACGEAKALGLRTLVHAHSAESAKAATLAGCTSIEHG AYVTDEVFDLMAKRGTYYDPNIGLVLQNYLENKSKFLGSGNYNEEGFAFMEKGLTITRDTFKRALTHKDLKIVYGTDAVA GAHGRNYEEFIVRVRDGGQAPMAAIESATSISAESMNLQDQIGALAPGMQADIIAFDGNPLQDVTAVRRVVFVMKGGTVF ESRLGH
Sequences:
>Translated_406_residues MRKLLRPIVNTVLFLPWLAAAQERSVALRVATAFDGKGKIIHNTTIVVQGTKILRIGGTVPAGAITYDLTDLTVSPGWID THSHVMYHFGDDARNGGRGEPPVHAMLRGVDNAILTLEAGFTTIQSPGSLQDKELRDAIARGVIPGPRLLTSLQPLMENS GPPEKLRELVRQRKQDGADFIKLFASKSIREGGAQTMTDEQLQAACGEAKALGLRTLVHAHSAESAKAATLAGCTSIEHG AYVTDEVFDLMAKRGTYYDPNIGLVLQNYLENKSKFLGSGNYNEEGFAFMEKGLTITRDTFKRALTHKDLKIVYGTDAVA GAHGRNYEEFIVRVRDGGQAPMAAIESATSISAESMNLQDQIGALAPGMQADIIAFDGNPLQDVTAVRRVVFVMKGGTVF ESRLGH >Mature_406_residues MRKLLRPIVNTVLFLPWLAAAQERSVALRVATAFDGKGKIIHNTTIVVQGTKILRIGGTVPAGAITYDLTDLTVSPGWID THSHVMYHFGDDARNGGRGEPPVHAMLRGVDNAILTLEAGFTTIQSPGSLQDKELRDAIARGVIPGPRLLTSLQPLMENS GPPEKLRELVRQRKQDGADFIKLFASKSIREGGAQTMTDEQLQAACGEAKALGLRTLVHAHSAESAKAATLAGCTSIEHG AYVTDEVFDLMAKRGTYYDPNIGLVLQNYLENKSKFLGSGNYNEEGFAFMEKGLTITRDTFKRALTHKDLKIVYGTDAVA GAHGRNYEEFIVRVRDGGQAPMAAIESATSISAESMNLQDQIGALAPGMQADIIAFDGNPLQDVTAVRRVVFVMKGGTVF ESRLGH
Specific function: Unknown
COG id: COG1228
COG function: function code Q; Imidazolonepropionase and related amidohydrolases
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Saccharomyces cerevisiae, GI6322248, Length=328, Percent_Identity=27.7439024390244, Blast_Score=96, Evalue=9e-21,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 43886; Mature: 43886
Theoretical pI: Translated: 7.41; Mature: 7.41
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRKLLRPIVNTVLFLPWLAAAQERSVALRVATAFDGKGKIIHNTTIVVQGTKILRIGGTV CHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEEEECCCCEEEEEEEEEEECCEEEEECCCC PAGAITYDLTDLTVSPGWIDTHSHVMYHFGDDARNGGRGEPPVHAMLRGVDNAILTLEAG CCCEEEEEEEEEEECCCEECCCCCEEEEECCCCCCCCCCCCHHHHHHHCCCCEEEEEECC FTTIQSPGSLQDKELRDAIARGVIPGPRLLTSLQPLMENSGPPEKLRELVRQRKQDGADF CEEECCCCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCHHH IKLFASKSIREGGAQTMTDEQLQAACGEAKALGLRTLVHAHSAESAKAATLAGCTSIEHG HHHHHHHHHHCCCCCCCCHHHHHHHHCHHHHHHHHHHHHHHCCCCHHHHHHHCCCCCCCC AYVTDEVFDLMAKRGTYYDPNIGLVLQNYLENKSKFLGSGNYNEEGFAFMEKGLTITRDT CEEHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHCCCEEEHHH FKRALTHKDLKIVYGTDAVAGAHGRNYEEFIVRVRDGGQAPMAAIESATSISAESMNLQD HHHHHCCCCEEEEECCCCCCCCCCCCHHHHEEEECCCCCCHHHHHHHHHHCCHHHCCHHH QIGALAPGMQADIIAFDGNPLQDVTAVRRVVFVMKGGTVFESRLGH HHHHCCCCCCEEEEEECCCCHHHHHHHHHHHHHCCCCCHHHHHCCC >Mature Secondary Structure MRKLLRPIVNTVLFLPWLAAAQERSVALRVATAFDGKGKIIHNTTIVVQGTKILRIGGTV CHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEEEECCCCEEEEEEEEEEECCEEEEECCCC PAGAITYDLTDLTVSPGWIDTHSHVMYHFGDDARNGGRGEPPVHAMLRGVDNAILTLEAG CCCEEEEEEEEEEECCCEECCCCCEEEEECCCCCCCCCCCCHHHHHHHCCCCEEEEEECC FTTIQSPGSLQDKELRDAIARGVIPGPRLLTSLQPLMENSGPPEKLRELVRQRKQDGADF CEEECCCCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCHHH IKLFASKSIREGGAQTMTDEQLQAACGEAKALGLRTLVHAHSAESAKAATLAGCTSIEHG HHHHHHHHHHCCCCCCCCHHHHHHHHCHHHHHHHHHHHHHHCCCCHHHHHHHCCCCCCCC AYVTDEVFDLMAKRGTYYDPNIGLVLQNYLENKSKFLGSGNYNEEGFAFMEKGLTITRDT CEEHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHCCCEEEHHH FKRALTHKDLKIVYGTDAVAGAHGRNYEEFIVRVRDGGQAPMAAIESATSISAESMNLQD HHHHHCCCCEEEEECCCCCCCCCCCCHHHHEEEECCCCCCHHHHHHHHHHCCHHHCCHHH QIGALAPGMQADIIAFDGNPLQDVTAVRRVVFVMKGGTVFESRLGH HHHHCCCCCCEEEEEECCCCHHHHHHHHHHHHHCCCCCHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA