Definition Candidatus Solibacter usitatus Ellin6076 chromosome, complete genome.
Accession NC_008536
Length 9,965,640

Click here to switch to the map view.

The map label for this gene is 116621081

Identifier: 116621081

GI number: 116621081

Start: 2460779

End: 2460994

Strand: Direct

Name: 116621081

Synonym: Acid_1962

Alternate gene names: NA

Gene position: 2460779-2460994 (Clockwise)

Preceding gene: 116621080

Following gene: 116621082

Centisome position: 24.69

GC content: 59.72

Gene sequence:

>216_bases
GTGCCACATCAATTTGATGTCGTGATCGAGCGCGATTCGGAAGGCTATTACGTAGCCTCAGTTCCCCAGATCCCTGCATG
CCACTCTCAGGCACGCTCGCTTGACGAAGTTACCGAGCGCATCCGCGAAGCCATCGCACTGTGCCTGGAAGTCGGAGGCG
CGCCGGAGCAGGAATTGGAGTTCGTCGGGATCCAGCGGGTGACCATCGCGGCATGA

Upstream 100 bases:

>100_bases
TACGACCGTAGGGACACATAAACGCGCTTTCCGCCGCGCAGCACCCGGCCGGTGCCTTTCAAAGGCGCGCAAGCGTCTAC
AATGGAGGCGAGGACAATCA

Downstream 100 bases:

>100_bases
GCCGAACCCCACGTGTAACGGGCTCCGAACTCATTGCGGCCCTCACGAAGGCGGGTTTTCAGGTTGTGCGCATCAAAGGC
AGCCATCATTTTCTCCGCCA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 71; Mature: 70

Protein sequence:

>71_residues
MPHQFDVVIERDSEGYYVASVPQIPACHSQARSLDEVTERIREAIALCLEVGGAPEQELEFVGIQRVTIAA

Sequences:

>Translated_71_residues
MPHQFDVVIERDSEGYYVASVPQIPACHSQARSLDEVTERIREAIALCLEVGGAPEQELEFVGIQRVTIAA
>Mature_70_residues
PHQFDVVIERDSEGYYVASVPQIPACHSQARSLDEVTERIREAIALCLEVGGAPEQELEFVGIQRVTIAA

Specific function: Unknown

COG id: COG1598

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0150 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005357 [H]

Pfam domain/function: PF03681 UPF0150 [H]

EC number: NA

Molecular weight: Translated: 7840; Mature: 7709

Theoretical pI: Translated: 4.23; Mature: 4.23

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.8 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
4.2 %Cys+Met (Translated Protein)
2.9 %Cys     (Mature Protein)
0.0 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPHQFDVVIERDSEGYYVASVPQIPACHSQARSLDEVTERIREAIALCLEVGGAPEQELE
CCCCEEEEEEECCCCEEEEECCCCCCHHHHHCCHHHHHHHHHHHHHHHHHCCCCCCHHHE
FVGIQRVTIAA
EECCEEEEEEC
>Mature Secondary Structure 
PHQFDVVIERDSEGYYVASVPQIPACHSQARSLDEVTERIREAIALCLEVGGAPEQELE
CCCEEEEEEECCCCEEEEECCCCCCHHHHHCCHHHHHHHHHHHHHHHHHCCCCCCHHHE
FVGIQRVTIAA
EECCEEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9389475 [H]