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The map label for this gene is 116621077

Identifier: 116621077

GI number: 116621077

Start: 2457966

End: 2458838

Strand: Direct

Name: 116621077

Synonym: Acid_1958

Alternate gene names: NA

Gene position: 2457966-2458838 (Clockwise)

Preceding gene: 116621076

Following gene: 116621079

Centisome position: 24.66

GC content: 60.25

Gene sequence:

>873_bases
ATGGGCAATAGTCTATCGGGCCGCATCGGGGTTTGCCGGCGGCTAGCTCCATTCCTGATTGGCGTGAGCCTTGCTGCCGC
CACACGTTACCCGGTCACCGGGGTTGTTCTGAAAGTTGACCCGCCGCATCGCAGCTTCGAAGCCTCCTGTGCCGCCATTC
CCGGGTACATGGAAGCGATGGCGATGGCGTATTCCGTTGTGGATAATCGTGAACTGGCCGATCTGAAGCCGGGCGCCTAT
GTAGACTTCACGCTGGTGGTGGACAAGAAGCGCTCCTATGCCGAACGCATCCGCATCCATCATTATGAGAGCGCCGAGCG
GGAGCCGATGCTCGCGCGCCGTCTCAAACTGCTGGAAGCCCCTCACGCGACCGTGCAACCAGGTGACGCCGTGCCCGACT
TCACGTTGACCGACCAGACCGGGCGCCGCGTAACCCTCTCGCAATGGGCTGGGAAAGTGGTGGGCGTGACCTTCATCTAT
ACCAGTTGTCCATTGCCCGACTACTGCTTCCGCCTAGCCAACAACTTCGGGCAACTGAACCAGCGCTTCGCGAGCCGCAT
GGGTCGCGACCTGGTGCTGCTCAGCATCAGCTTCGATCCGGTGCATGACCAGCCCGCTGTACTGGCAAAATATGCGTCGA
CGTGGAAGGCCGATCCGGAATCGTGGTACTTCCTGACCGGGCCGCTCGACGATGTGAAGGCCGTTTCGCGCCAGTTCGGA
CTGAATTTCTGGCCCGACGAAGCCTACTTAACGCACTCGCTGCATACACTGGTAATCGATCGCCGAGGCCGGCTGGCAGC
CGATTTCGAAGGCAATCAATTCACCGCCCGTCAATTGGGAGACTATGTGGAAGCCCTGATTTCCGGCAGGTAG

Upstream 100 bases:

>100_bases
CCCAAGAACCAGGCGATCGAAATCCGGCAGTCCGCAAGCGACTACCGCGTGATCGAGCGGCACCGGTTCAAGTTGGGTGG
CGATCAGTTGGGTGGGGATC

Downstream 100 bases:

>100_bases
CATTGAAGAGGTGGTGAGGCAGGTTGAAATCCGTGGCGATTCCCCTGGTGTCTCAGACCATGACGGCAGTTTAGCGCTTG
GGACTTGATACGCCAAGTGC

Product: electron transport protein SCO1/SenC

Products: NA

Alternate protein names: Oxidoreductase Protein; SCO1/SenC; SCO1/SenC Family Protein; Cytochrome C Oxidase Cu(A) Center Assembly Protein; SCO1/SenC Superfamily; Lipoprotein

Number of amino acids: Translated: 290; Mature: 289

Protein sequence:

>290_residues
MGNSLSGRIGVCRRLAPFLIGVSLAAATRYPVTGVVLKVDPPHRSFEASCAAIPGYMEAMAMAYSVVDNRELADLKPGAY
VDFTLVVDKKRSYAERIRIHHYESAEREPMLARRLKLLEAPHATVQPGDAVPDFTLTDQTGRRVTLSQWAGKVVGVTFIY
TSCPLPDYCFRLANNFGQLNQRFASRMGRDLVLLSISFDPVHDQPAVLAKYASTWKADPESWYFLTGPLDDVKAVSRQFG
LNFWPDEAYLTHSLHTLVIDRRGRLAADFEGNQFTARQLGDYVEALISGR

Sequences:

>Translated_290_residues
MGNSLSGRIGVCRRLAPFLIGVSLAAATRYPVTGVVLKVDPPHRSFEASCAAIPGYMEAMAMAYSVVDNRELADLKPGAY
VDFTLVVDKKRSYAERIRIHHYESAEREPMLARRLKLLEAPHATVQPGDAVPDFTLTDQTGRRVTLSQWAGKVVGVTFIY
TSCPLPDYCFRLANNFGQLNQRFASRMGRDLVLLSISFDPVHDQPAVLAKYASTWKADPESWYFLTGPLDDVKAVSRQFG
LNFWPDEAYLTHSLHTLVIDRRGRLAADFEGNQFTARQLGDYVEALISGR
>Mature_289_residues
GNSLSGRIGVCRRLAPFLIGVSLAAATRYPVTGVVLKVDPPHRSFEASCAAIPGYMEAMAMAYSVVDNRELADLKPGAYV
DFTLVVDKKRSYAERIRIHHYESAEREPMLARRLKLLEAPHATVQPGDAVPDFTLTDQTGRRVTLSQWAGKVVGVTFIYT
SCPLPDYCFRLANNFGQLNQRFASRMGRDLVLLSISFDPVHDQPAVLAKYASTWKADPESWYFLTGPLDDVKAVSRQFGL
NFWPDEAYLTHSLHTLVIDRRGRLAADFEGNQFTARQLGDYVEALISGR

Specific function: Unknown

COG id: COG1999

COG function: function code R; Uncharacterized protein SCO1/SenC/PrrC, involved in biogenesis of respiratory and photosynthetic systems

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 32346; Mature: 32215

Theoretical pI: Translated: 8.30; Mature: 8.30

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGNSLSGRIGVCRRLAPFLIGVSLAAATRYPVTGVVLKVDPPHRSFEASCAAIPGYMEAM
CCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEECCCCCCCCCHHHHCCHHHHHH
AMAYSVVDNRELADLKPGAYVDFTLVVDKKRSYAERIRIHHYESAEREPMLARRLKLLEA
HHHHHHHCCCCCCCCCCCCEEEEEEEECCCHHHHHHHHHHCCCCCCCCHHHHHHHHHHHC
PHATVQPGDAVPDFTLTDQTGRRVTLSQWAGKVVGVTFIYTSCPLPDYCFRLANNFGQLN
CCCCCCCCCCCCCCEEECCCCCEEEHHHHCCCEEEEEEEEECCCCHHHHHHHHHHHHHHH
QRFASRMGRDLVLLSISFDPVHDQPAVLAKYASTWKADPESWYFLTGPLDDVKAVSRQFG
HHHHHHCCCEEEEEEEECCCCCCCHHHHHHHHHHCCCCCCCEEEEECCHHHHHHHHHHHC
LNFWPDEAYLTHSLHTLVIDRRGRLAADFEGNQFTARQLGDYVEALISGR
CCCCCCCHHHHHHHEEEEEECCCCEEECCCCCEEHHHHHHHHHHHHHCCC
>Mature Secondary Structure 
GNSLSGRIGVCRRLAPFLIGVSLAAATRYPVTGVVLKVDPPHRSFEASCAAIPGYMEAM
CCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEECCCCCCCCCHHHHCCHHHHHH
AMAYSVVDNRELADLKPGAYVDFTLVVDKKRSYAERIRIHHYESAEREPMLARRLKLLEA
HHHHHHHCCCCCCCCCCCCEEEEEEEECCCHHHHHHHHHHCCCCCCCCHHHHHHHHHHHC
PHATVQPGDAVPDFTLTDQTGRRVTLSQWAGKVVGVTFIYTSCPLPDYCFRLANNFGQLN
CCCCCCCCCCCCCCEEECCCCCEEEHHHHCCCEEEEEEEEECCCCHHHHHHHHHHHHHHH
QRFASRMGRDLVLLSISFDPVHDQPAVLAKYASTWKADPESWYFLTGPLDDVKAVSRQFG
HHHHHHCCCEEEEEEEECCCCCCCHHHHHHHHHHCCCCCCCEEEEECCHHHHHHHHHHHC
LNFWPDEAYLTHSLHTLVIDRRGRLAADFEGNQFTARQLGDYVEALISGR
CCCCCCCHHHHHHHEEEEEECCCCEEECCCCCEEHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA