| Definition | Candidatus Solibacter usitatus Ellin6076 chromosome, complete genome. |
|---|---|
| Accession | NC_008536 |
| Length | 9,965,640 |
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The map label for this gene is 116621059
Identifier: 116621059
GI number: 116621059
Start: 2419675
End: 2420718
Strand: Direct
Name: 116621059
Synonym: Acid_1940
Alternate gene names: NA
Gene position: 2419675-2420718 (Clockwise)
Preceding gene: 116621058
Following gene: 116621064
Centisome position: 24.28
GC content: 62.55
Gene sequence:
>1044_bases ATGACAACCACAAACCCCATACTCGATTTCGGTATCGATAAATCCACCCTGCAATACGTTGGGCACGATCTGCAGCGTCC CGAATGCATCCTGGCGGAACCGGACGGCGTTCTGTGGTCCGCCGACGCCCGAGGCGGCGTCATGCGGATTGCTCCGGACG GCTCGCAGCGCATGATCGCGCAGCAGAGCTCGCAGCATTTCGCAGGGGCGAACACCGAAGCCAGCCGCTACCTGGAGGGC ACGCTGCCCAACGGCCTGGCCTTCGCGCGGAATGGCGACATCCTTATTTCCAACTTCGGCACCGACTGCCTGGAGATCAT GACGCGCGAAGGCGAGTCGCGCGTGCTCGCCGATTCGATCGATGGCGAACCGATCGGCAAGGTCAACTTCGTGCTTCGCG ATCCGAAGGATCGCATTTGGATCACGATCTCCACGCGCATTAAAAACTGGATGCACGCGCTCCGCACCGATCTTAAAGAC GGTTACCTGGCCCGCTACATCGACGGCAAGTTCCGCATCGTGGCGGACGGCTTCGGCTTCACCAACGAGATCCGCTTCGA TGCGCGCGAAGAGTGGCTCTACGTAGTGGAGACCACGGGCGGGTGCATCACCCGCCTACGCATCGACGAGGATGGCACGC CCGTCGAGCGCGAGATCTTCGGGCCGGCGAGGCTGGGAAAGGGCGCCTGGCCTGACGGGATCGCTTTCGATAGTTATGGC AATCTGTGGGGCACGCTGGTCTACTCGGACAAGCTGTTCGTGCTCACGCCACAGGGCGAGCAGCGGGTTCTGCTGGACGA AGGCGATCCCGAAAAAGTGAATGCTCTGGAACAGGCCTTCTTCAAGGGCCAGGTAAATCACGACGTGCTGTTCGGGACGG GCCGCGGTGTAGCGCCCTGGATGGCGAGCGTCACGTTCGGCGGACCGGACCTGCAGACCGCATATATCGGCTCGCTTCGC GGGTCGCGCATTCCCTATTTCCGCGCGCCCGTTCCCGGGCTGCCGATGGTCCACTGGAACGACCGCCGTGCCGCGGGAAA CTAA
Upstream 100 bases:
>100_bases ACGCGCAGCGGGAGATCGAAGCGGCGGTGCGGCTCGACCCTGCCCTGGCCGAAGCGCGCCGGGACCTGGCCGATATCATC GCCGCGAAAGGCCGACGACC
Downstream 100 bases:
>100_bases GCGTGACCCGGCGGCCATACTGATCCCGACTCCTGGTTTAGTCCTCGAGCGATCCGACCAACTCGCCGATTTCCGCAGCG ACCGCGACGACCAGGCCGGC
Product: SMP-30/gluconolaconase/LRE domain-containing protein
Products: NA
Alternate protein names: SMP-30/Gluconolaconase/LRE Domain-Containing Protein; SMP-30/Gluconolaconase/LRE-Like Region Family; SMP-30/Gluconolaconase/LRE Domain Protein
Number of amino acids: Translated: 347; Mature: 346
Protein sequence:
>347_residues MTTTNPILDFGIDKSTLQYVGHDLQRPECILAEPDGVLWSADARGGVMRIAPDGSQRMIAQQSSQHFAGANTEASRYLEG TLPNGLAFARNGDILISNFGTDCLEIMTREGESRVLADSIDGEPIGKVNFVLRDPKDRIWITISTRIKNWMHALRTDLKD GYLARYIDGKFRIVADGFGFTNEIRFDAREEWLYVVETTGGCITRLRIDEDGTPVEREIFGPARLGKGAWPDGIAFDSYG NLWGTLVYSDKLFVLTPQGEQRVLLDEGDPEKVNALEQAFFKGQVNHDVLFGTGRGVAPWMASVTFGGPDLQTAYIGSLR GSRIPYFRAPVPGLPMVHWNDRRAAGN
Sequences:
>Translated_347_residues MTTTNPILDFGIDKSTLQYVGHDLQRPECILAEPDGVLWSADARGGVMRIAPDGSQRMIAQQSSQHFAGANTEASRYLEG TLPNGLAFARNGDILISNFGTDCLEIMTREGESRVLADSIDGEPIGKVNFVLRDPKDRIWITISTRIKNWMHALRTDLKD GYLARYIDGKFRIVADGFGFTNEIRFDAREEWLYVVETTGGCITRLRIDEDGTPVEREIFGPARLGKGAWPDGIAFDSYG NLWGTLVYSDKLFVLTPQGEQRVLLDEGDPEKVNALEQAFFKGQVNHDVLFGTGRGVAPWMASVTFGGPDLQTAYIGSLR GSRIPYFRAPVPGLPMVHWNDRRAAGN >Mature_346_residues TTTNPILDFGIDKSTLQYVGHDLQRPECILAEPDGVLWSADARGGVMRIAPDGSQRMIAQQSSQHFAGANTEASRYLEGT LPNGLAFARNGDILISNFGTDCLEIMTREGESRVLADSIDGEPIGKVNFVLRDPKDRIWITISTRIKNWMHALRTDLKDG YLARYIDGKFRIVADGFGFTNEIRFDAREEWLYVVETTGGCITRLRIDEDGTPVEREIFGPARLGKGAWPDGIAFDSYGN LWGTLVYSDKLFVLTPQGEQRVLLDEGDPEKVNALEQAFFKGQVNHDVLFGTGRGVAPWMASVTFGGPDLQTAYIGSLRG SRIPYFRAPVPGLPMVHWNDRRAAGN
Specific function: Unknown
COG id: COG3386
COG function: function code G; Gluconolactonase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 38462; Mature: 38331
Theoretical pI: Translated: 5.00; Mature: 5.00
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTTTNPILDFGIDKSTLQYVGHDLQRPECILAEPDGVLWSADARGGVMRIAPDGSQRMIA CCCCCCCEECCCCHHHHHHHCCCCCCCCEEEECCCCEEEECCCCCCEEEECCCCCHHHHH QQSSQHFAGANTEASRYLEGTLPNGLAFARNGDILISNFGTDCLEIMTREGESRVLADSI HHCCCCCCCCCCCHHHEEECCCCCCEEEECCCCEEEECCCCHHHHHHHCCCCCEEEEECC DGEPIGKVNFVLRDPKDRIWITISTRIKNWMHALRTDLKDGYLARYIDGKFRIVADGFGF CCCCCCEEEEEEECCCCEEEEEEEHHHHHHHHHHHHHCCCCEEEEEECCEEEEEECCCCC TNEIRFDAREEWLYVVETTGGCITRLRIDEDGTPVEREIFGPARLGKGAWPDGIAFDSYG CEEEEECCCCCEEEEEEECCCEEEEEEECCCCCCCHHHHCCHHHCCCCCCCCCCEECCCC NLWGTLVYSDKLFVLTPQGEQRVLLDEGDPEKVNALEQAFFKGQVNHDVLFGTGRGVAPW CEEEEEEEECEEEEECCCCCCEEEECCCCCHHHHHHHHHHHCCCCCCEEEEECCCCCCCC MASVTFGGPDLQTAYIGSLRGSRIPYFRAPVPGLPMVHWNDRRAAGN EEEEEECCCCCCCEEEECCCCCCCCEEECCCCCCCEEEECCCCCCCC >Mature Secondary Structure TTTNPILDFGIDKSTLQYVGHDLQRPECILAEPDGVLWSADARGGVMRIAPDGSQRMIA CCCCCCEECCCCHHHHHHHCCCCCCCCEEEECCCCEEEECCCCCCEEEECCCCCHHHHH QQSSQHFAGANTEASRYLEGTLPNGLAFARNGDILISNFGTDCLEIMTREGESRVLADSI HHCCCCCCCCCCCHHHEEECCCCCCEEEECCCCEEEECCCCHHHHHHHCCCCCEEEEECC DGEPIGKVNFVLRDPKDRIWITISTRIKNWMHALRTDLKDGYLARYIDGKFRIVADGFGF CCCCCCEEEEEEECCCCEEEEEEEHHHHHHHHHHHHHCCCCEEEEEECCEEEEEECCCCC TNEIRFDAREEWLYVVETTGGCITRLRIDEDGTPVEREIFGPARLGKGAWPDGIAFDSYG CEEEEECCCCCEEEEEEECCCEEEEEEECCCCCCCHHHHCCHHHCCCCCCCCCCEECCCC NLWGTLVYSDKLFVLTPQGEQRVLLDEGDPEKVNALEQAFFKGQVNHDVLFGTGRGVAPW CEEEEEEEECEEEEECCCCCCEEEECCCCCHHHHHHHHHHHCCCCCCEEEEECCCCCCCC MASVTFGGPDLQTAYIGSLRGSRIPYFRAPVPGLPMVHWNDRRAAGN EEEEEECCCCCCCEEEECCCCCCCCEEECCCCCCCEEEECCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA