| Definition | Candidatus Solibacter usitatus Ellin6076 chromosome, complete genome. |
|---|---|
| Accession | NC_008536 |
| Length | 9,965,640 |
Click here to switch to the map view.
The map label for this gene is 116621019
Identifier: 116621019
GI number: 116621019
Start: 2358203
End: 2359156
Strand: Direct
Name: 116621019
Synonym: Acid_1900
Alternate gene names: NA
Gene position: 2358203-2359156 (Clockwise)
Preceding gene: 116621017
Following gene: 116621021
Centisome position: 23.66
GC content: 62.47
Gene sequence:
>954_bases ATGAAAAAGTACTCCTTACTTCCAATGATGTGCCTTCTTCTGGCCCCCGCTTTCGCCCAGAAGAACCCCTTCGCAGGGCG ATGGGACTTGAATGTGACCCCCGCCACCGGCACTGCGTATCCGCAATGGATGGAGATCACCGATGCCGCCGGTAAAGTCG ACGGGCGAATTCAGCCGCGCGGCGGCGCGGTGCGGCCGATTGTTGCGGCCAGGATGGATGGCGGCCACTTGATCATCACG GTGGCGGACGCAACGCCGCGCGGACCGGCGACCACGTGGGACCTGACTGTCCAAGGCGACAAGCTGAGTGGCGTGGAAAA GCGCGGAGACGCGGCCGGGCCGCAGATCGCCGGCGTGCGCGCTCCGGCTCTGAAGCGGCCGATGCCCAAGGCGTGGACGG CTCCCGAACCGATTTTCAACGGCAAGGACCTGACCGGATGGGAACCGATCGGCAACGCGCAAAACAGCAAGTGGGTCGCG CGCAATGGCGAACTGGTGAATGACAATCCCGAAGTCGAAGGGCAGCGCGGGCCGGGAGCCGCGAACATCAAAACCACCCG CAAGTTCGATGATTTCAAGCTGCACATCGAGGTGAACTGCCCAGAGCACGGCAACAGCGGAATTTATTTGCGCGGCCGGT ACGAAATCCAGGTGGGCACGGAGGGCGGCACGGTTCCCTCACACGAGATGGGAGCAGTCTACGGGCACATCGCGCCGGCA GGGAATATCGGGAACAAGCTGGGCCAGTGGACGGCCTTCGATATCACGCTGGTGGGCCGTACGCTGACCGTGGTGCGCGA CGGAGTGACGATTCACGACAAGGTCGAGCTGCCTGGGCCAACCGGCGGAGCGCTGGATAGCAATGAAGGCGAACCGGGTC CCTTCTTCTTGCAGGGCGACCACCACGGAGTAATTCAGTTCCGGAATATCACGATTTCCGAGCCGAAGAAGTAA
Upstream 100 bases:
>100_bases ATCAGTAGCTTCCTCATTCAGTTATCCGCAGCAGGTATTGCACCAAAGATTGGAAACGAACTTTCAACGCGGAGTGTGCA TTCGGTTAAACTGGTCGGAA
Downstream 100 bases:
>100_bases AAGGCATTTGTTTGCTCGCAGGCCGCGAAGATTATGGGGTCAGCTGAGAAGGCATTTTTCTCGCAGAGGCCGCAGAGATC GCAGAGAAAACCAAGGAAAG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 317; Mature: 317
Protein sequence:
>317_residues MKKYSLLPMMCLLLAPAFAQKNPFAGRWDLNVTPATGTAYPQWMEITDAAGKVDGRIQPRGGAVRPIVAARMDGGHLIIT VADATPRGPATTWDLTVQGDKLSGVEKRGDAAGPQIAGVRAPALKRPMPKAWTAPEPIFNGKDLTGWEPIGNAQNSKWVA RNGELVNDNPEVEGQRGPGAANIKTTRKFDDFKLHIEVNCPEHGNSGIYLRGRYEIQVGTEGGTVPSHEMGAVYGHIAPA GNIGNKLGQWTAFDITLVGRTLTVVRDGVTIHDKVELPGPTGGALDSNEGEPGPFFLQGDHHGVIQFRNITISEPKK
Sequences:
>Translated_317_residues MKKYSLLPMMCLLLAPAFAQKNPFAGRWDLNVTPATGTAYPQWMEITDAAGKVDGRIQPRGGAVRPIVAARMDGGHLIIT VADATPRGPATTWDLTVQGDKLSGVEKRGDAAGPQIAGVRAPALKRPMPKAWTAPEPIFNGKDLTGWEPIGNAQNSKWVA RNGELVNDNPEVEGQRGPGAANIKTTRKFDDFKLHIEVNCPEHGNSGIYLRGRYEIQVGTEGGTVPSHEMGAVYGHIAPA GNIGNKLGQWTAFDITLVGRTLTVVRDGVTIHDKVELPGPTGGALDSNEGEPGPFFLQGDHHGVIQFRNITISEPKK >Mature_317_residues MKKYSLLPMMCLLLAPAFAQKNPFAGRWDLNVTPATGTAYPQWMEITDAAGKVDGRIQPRGGAVRPIVAARMDGGHLIIT VADATPRGPATTWDLTVQGDKLSGVEKRGDAAGPQIAGVRAPALKRPMPKAWTAPEPIFNGKDLTGWEPIGNAQNSKWVA RNGELVNDNPEVEGQRGPGAANIKTTRKFDDFKLHIEVNCPEHGNSGIYLRGRYEIQVGTEGGTVPSHEMGAVYGHIAPA GNIGNKLGQWTAFDITLVGRTLTVVRDGVTIHDKVELPGPTGGALDSNEGEPGPFFLQGDHHGVIQFRNITISEPKK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 33987; Mature: 33987
Theoretical pI: Translated: 8.25; Mature: 8.25
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKKYSLLPMMCLLLAPAFAQKNPFAGRWDLNVTPATGTAYPQWMEITDAAGKVDGRIQPR CCCCHHHHHHHHHHHHHHHCCCCCCCEEEEEEECCCCCCCCCEEEEECCCCCCCCEEECC GGAVRPIVAARMDGGHLIITVADATPRGPATTWDLTVQGDKLSGVEKRGDAAGPQIAGVR CCCCCEEEEEEECCCEEEEEEECCCCCCCCEEEEEEEECCCCCCCHHCCCCCCCEEECCC APALKRPMPKAWTAPEPIFNGKDLTGWEPIGNAQNSKWVARNGELVNDNPEVEGQRGPGA CHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEECCCEEECCCCCCCCCCCCCC ANIKTTRKFDDFKLHIEVNCPEHGNSGIYLRGRYEIQVGTEGGTVPSHEMGAVYGHIAPA CCCEECCCCCEEEEEEEEECCCCCCCCEEEEEEEEEEECCCCCCCCCCCCCEEEEECCCC GNIGNKLGQWTAFDITLVGRTLTVVRDGVTIHDKVELPGPTGGALDSNEGEPGPFFLQGD CCCCHHHCCEEEEEEEEECCEEEEEECCEEEEEEEECCCCCCCCCCCCCCCCCCEEEECC HHGVIQFRNITISEPKK CCCEEEEEEEEECCCCC >Mature Secondary Structure MKKYSLLPMMCLLLAPAFAQKNPFAGRWDLNVTPATGTAYPQWMEITDAAGKVDGRIQPR CCCCHHHHHHHHHHHHHHHCCCCCCCEEEEEEECCCCCCCCCEEEEECCCCCCCCEEECC GGAVRPIVAARMDGGHLIITVADATPRGPATTWDLTVQGDKLSGVEKRGDAAGPQIAGVR CCCCCEEEEEEECCCEEEEEEECCCCCCCCEEEEEEEECCCCCCCHHCCCCCCCEEECCC APALKRPMPKAWTAPEPIFNGKDLTGWEPIGNAQNSKWVARNGELVNDNPEVEGQRGPGA CHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEECCCEEECCCCCCCCCCCCCC ANIKTTRKFDDFKLHIEVNCPEHGNSGIYLRGRYEIQVGTEGGTVPSHEMGAVYGHIAPA CCCEECCCCCEEEEEEEEECCCCCCCCEEEEEEEEEEECCCCCCCCCCCCCEEEEECCCC GNIGNKLGQWTAFDITLVGRTLTVVRDGVTIHDKVELPGPTGGALDSNEGEPGPFFLQGD CCCCHHHCCEEEEEEEEECCEEEEEECCEEEEEEEECCCCCCCCCCCCCCCCCCEEEECC HHGVIQFRNITISEPKK CCCEEEEEEEEECCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA