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The map label for this gene is sdpR [H]

Identifier: 116620996

GI number: 116620996

Start: 2335354

End: 2335668

Strand: Reverse

Name: sdpR [H]

Synonym: Acid_1877

Alternate gene names: 116620996

Gene position: 2335668-2335354 (Counterclockwise)

Preceding gene: 116620998

Following gene: 116620995

Centisome position: 23.44

GC content: 58.1

Gene sequence:

>315_bases
ATGGATCCGTTCGAGGTGATCGCCGATCCGACGCGTCGCCGGCTGATCGAGTTGCTGAGGGACCGGGAGCGCCAGGCAGG
CGAATTGGTGACGCACTTTGACGTGTCGTTCTCGGCGATTTCCCAGCAACTTCGAATACTGAGCGATGCCAATATTGTTC
AGTCGCGCCGGGAGGGACGAAAACAAATCTATAGTCTGAATCCGCAGAGCCTCGATCCCGTTGCCGACTGGCTCTCGCGT
CATGCCCGGGCCTTCTGGGAACAGAAGCTCAATAGCCTGGGCGGGGTCCTCAGGAGAATGAAGGATGAAACGTGA

Upstream 100 bases:

>100_bases
GAGTGGCGCGGAAACCGGGTGCAACCCTGATCAAAATCAAAGACAGGGTAACCACCAAAATCTGTTTGACATTTTAGCGA
TCTCTAAAATATAGTGGACC

Downstream 100 bases:

>100_bases
CCTCATAATAGAATGCACATACGAGGCATCTATCGACTTGGTTTGGCGAGCGATCACCGATTCCACTTTGCTCACGGAGT
GGCTTATGGAAAACAATTTT

Product: ArsR family transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 104; Mature: 104

Protein sequence:

>104_residues
MDPFEVIADPTRRRLIELLRDRERQAGELVTHFDVSFSAISQQLRILSDANIVQSRREGRKQIYSLNPQSLDPVADWLSR
HARAFWEQKLNSLGGVLRRMKDET

Sequences:

>Translated_104_residues
MDPFEVIADPTRRRLIELLRDRERQAGELVTHFDVSFSAISQQLRILSDANIVQSRREGRKQIYSLNPQSLDPVADWLSR
HARAFWEQKLNSLGGVLRRMKDET
>Mature_104_residues
MDPFEVIADPTRRRLIELLRDRERQAGELVTHFDVSFSAISQQLRILSDANIVQSRREGRKQIYSLNPQSLDPVADWLSR
HARAFWEQKLNSLGGVLRRMKDET

Specific function: Represses the transcription of the sdpIR operon and of several other operons that probably contribute to delaying commitment to sporulation [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH arsR-type DNA-binding domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001845
- InterPro:   IPR011991 [H]

Pfam domain/function: PF01022 HTH_5 [H]

EC number: NA

Molecular weight: Translated: 12147; Mature: 12147

Theoretical pI: Translated: 10.08; Mature: 10.08

Prosite motif: PS50987 HTH_ARSR_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
1.9 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
1.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDPFEVIADPTRRRLIELLRDRERQAGELVTHFDVSFSAISQQLRILSDANIVQSRREGR
CCHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
KQIYSLNPQSLDPVADWLSRHARAFWEQKLNSLGGVLRRMKDET
HHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MDPFEVIADPTRRRLIELLRDRERQAGELVTHFDVSFSAISQQLRILSDANIVQSRREGR
CCHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
KQIYSLNPQSLDPVADWLSRHARAFWEQKLNSLGGVLRRMKDET
HHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]