| Definition | Candidatus Solibacter usitatus Ellin6076 chromosome, complete genome. |
|---|---|
| Accession | NC_008536 |
| Length | 9,965,640 |
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The map label for this gene is 116620826
Identifier: 116620826
GI number: 116620826
Start: 2126309
End: 2127181
Strand: Direct
Name: 116620826
Synonym: Acid_1707
Alternate gene names: NA
Gene position: 2126309-2127181 (Clockwise)
Preceding gene: 116620824
Following gene: 116620830
Centisome position: 21.34
GC content: 61.97
Gene sequence:
>873_bases GTGAGCAACAGGTGTCTGCGGCCGCTGGCCGCGCTCGCGACGATCGTGTATCTATCTCTTCCGTGCGCTGCACAACCCTT CGAAATGCCAACCGTCAGAGGCGAAGTGCGGGCCGATTCTCGTGTGGATTTTCGCGATTACCGTATCGAATTGGCGGATT TGAATCATCGCGGCGATGTCTACCGCGCCGATCTTAGTTTTGACGGGAGCTTCGAATTTCGCCGCATTCCGGCCGGTGAC TATCAATTGTTCGTAGTAACCCAGGGCGGAGATATCGTACATCAGGAATTTGTAGCGCTGAACCCGCACCTTACTCAGAT CAGTGTGCGGCTCTCTGCCACAGGAAAAGGGCCATTAGTTCCAGGCACCGTTTCCATAACCCAACTGCGTCACCCGCCTG ACCGCAAGGCCTTTCAGTCTTTCGCCGCCGCGCAGCGATTCGCCGCCGCCGGTAGCCCCGAAAAGGCGGCCGAAGAGCTG GAGAAGGCAGTCCGTATTTCTCCGGAATTCGCCGACGCCTACAGCAATCTCGCCGTTCAGCACATGCGCATGCGCCGCTT TCCGGAAGCCGTCGCCGAACTCACTCGCGCGCTTGCAATCGCGGGACCCAATCCGTTGATGCTCTGCAACCTCGCCTACG CACAGCTCAATCTGGGCCGAGTTTCCGAATCCCTCGGCGCGGTTCATGCCGCGCTGCGCCTGGATGCCGGCTATGCGCAG GGCCACCTGATTCTGGGCTCGATCCTCGCCGCTGACCCGCGCACGCGCGCCGAGGCCATCCCTCATCTGGAGCGCGCCGC CGAAACCATCCCCTCCGCCCGCGCCACGTTGGAACGCGCGCGCAGCGCAATGCAGGCCGCCGCCGCCAACTGA
Upstream 100 bases:
>100_bases ATTTGCTCATGCGGTTCCGCTCGCTTAGCATGAGAACGTAGGCAGATTGTCCAAGCCGACAGCTCCCAATCTTACAAAAA AATAAATTGGAGGAAAGACT
Downstream 100 bases:
>100_bases TCAAACTTCGCCGACGATCTCCTGGTCCTCGTAACACCAGATCCAGCTCTCGCCGGGTTCGATCGAGCGCACCACCGGGT GTTTCACCCGGTGGTAATGC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 290; Mature: 289
Protein sequence:
>290_residues MSNRCLRPLAALATIVYLSLPCAAQPFEMPTVRGEVRADSRVDFRDYRIELADLNHRGDVYRADLSFDGSFEFRRIPAGD YQLFVVTQGGDIVHQEFVALNPHLTQISVRLSATGKGPLVPGTVSITQLRHPPDRKAFQSFAAAQRFAAAGSPEKAAEEL EKAVRISPEFADAYSNLAVQHMRMRRFPEAVAELTRALAIAGPNPLMLCNLAYAQLNLGRVSESLGAVHAALRLDAGYAQ GHLILGSILAADPRTRAEAIPHLERAAETIPSARATLERARSAMQAAAAN
Sequences:
>Translated_290_residues MSNRCLRPLAALATIVYLSLPCAAQPFEMPTVRGEVRADSRVDFRDYRIELADLNHRGDVYRADLSFDGSFEFRRIPAGD YQLFVVTQGGDIVHQEFVALNPHLTQISVRLSATGKGPLVPGTVSITQLRHPPDRKAFQSFAAAQRFAAAGSPEKAAEEL EKAVRISPEFADAYSNLAVQHMRMRRFPEAVAELTRALAIAGPNPLMLCNLAYAQLNLGRVSESLGAVHAALRLDAGYAQ GHLILGSILAADPRTRAEAIPHLERAAETIPSARATLERARSAMQAAAAN >Mature_289_residues SNRCLRPLAALATIVYLSLPCAAQPFEMPTVRGEVRADSRVDFRDYRIELADLNHRGDVYRADLSFDGSFEFRRIPAGDY QLFVVTQGGDIVHQEFVALNPHLTQISVRLSATGKGPLVPGTVSITQLRHPPDRKAFQSFAAAQRFAAAGSPEKAAEELE KAVRISPEFADAYSNLAVQHMRMRRFPEAVAELTRALAIAGPNPLMLCNLAYAQLNLGRVSESLGAVHAALRLDAGYAQG HLILGSILAADPRTRAEAIPHLERAAETIPSARATLERARSAMQAAAAN
Specific function: Unknown
COG id: COG0457
COG function: function code R; FOG: TPR repeat
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 31506; Mature: 31375
Theoretical pI: Translated: 8.48; Mature: 8.48
Prosite motif: PS50293 TPR_REGION
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSNRCLRPLAALATIVYLSLPCAAQPFEMPTVRGEVRADSRVDFRDYRIELADLNHRGDV CCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCHHHEEEEEEECCCCCCE YRADLSFDGSFEFRRIPAGDYQLFVVTQGGDIVHQEFVALNPHLTQISVRLSATGKGPLV EEEECCCCCCCEEEECCCCCEEEEEEECCCCCHHHHHHCCCCCEEEEEEEEEECCCCCCC PGTVSITQLRHPPDRKAFQSFAAAQRFAAAGSPEKAAEELEKAVRISPEFADAYSNLAVQ CCEEEEEECCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHH HMRMRRFPEAVAELTRALAIAGPNPLMLCNLAYAQLNLGRVSESLGAVHAALRLDAGYAQ HHHHHHHHHHHHHHHHHHHHCCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC GHLILGSILAADPRTRAEAIPHLERAAETIPSARATLERARSAMQAAAAN CHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure SNRCLRPLAALATIVYLSLPCAAQPFEMPTVRGEVRADSRVDFRDYRIELADLNHRGDV CCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCHHHEEEEEEECCCCCCE YRADLSFDGSFEFRRIPAGDYQLFVVTQGGDIVHQEFVALNPHLTQISVRLSATGKGPLV EEEECCCCCCCEEEECCCCCEEEEEEECCCCCHHHHHHCCCCCEEEEEEEEEECCCCCCC PGTVSITQLRHPPDRKAFQSFAAAQRFAAAGSPEKAAEELEKAVRISPEFADAYSNLAVQ CCEEEEEECCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHH HMRMRRFPEAVAELTRALAIAGPNPLMLCNLAYAQLNLGRVSESLGAVHAALRLDAGYAQ HHHHHHHHHHHHHHHHHHHHCCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC GHLILGSILAADPRTRAEAIPHLERAAETIPSARATLERARSAMQAAAAN CHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA