| Definition | Candidatus Solibacter usitatus Ellin6076 chromosome, complete genome. |
|---|---|
| Accession | NC_008536 |
| Length | 9,965,640 |
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The map label for this gene is 116620822
Identifier: 116620822
GI number: 116620822
Start: 2123388
End: 2123876
Strand: Reverse
Name: 116620822
Synonym: Acid_1703
Alternate gene names: NA
Gene position: 2123876-2123388 (Counterclockwise)
Preceding gene: 116620823
Following gene: 116620821
Centisome position: 21.31
GC content: 61.76
Gene sequence:
>489_bases GTGCCGGTCTTTATTCCCAAGTCAGGTGAAATTTACCGGGGCGACGAACGCCTGCCCGCTCCGGATCCCTGGATTCGGCA TTTGGCGTACCTGATGGACGGCGCGATACCGATCGGCCGGTGGTCGATCGGGCTTGATCCGTTGATCGGCATGGTCCCAG GCATTGGCGACCTGTTGGGTGCGTTGATTTCAATGGTGATTGTGGTGCGCGCGGTGCAGGCCGGGGTCCCGCGGGTTGCG GTCGCGAGAATGCTGGCCAACATCACGATTGACACCCTGGTGGGCTCCATCCCGCTGTTCGGCGACGCGTTCGACTTCGC GTTCAAGTCCAACCTGAAGAACCTGCGTATCTACGAGGAGTCGCTGCTCGACCGCAGGGCATCCACGGTGCGGCATTGGT GGTTCTTCCTGTTGCTATTCCTGGTCGTCGTCGCCGGCTTCGCCGCGATCGCGGTTGGTCTGTTCGCACTCGCAAGGCGC GTGTTCTGA
Upstream 100 bases:
>100_bases AACATACGAACGATTCCTGAGCGGAGATCCGGCCTCGGACGAGGCTGGATTTCCGCTCTTTGATTTTCTGGTTGGAACCT AACGTGCAACTGAGGTCGTA
Downstream 100 bases:
>100_bases CGTTTGGCAGGGAATCGCGAAAAGGGCGTGACCGCTGAGTTACGGCCGGGTTGGTTTCGATCCCGCGGCGGCCTTGGCCG GCCGTTTTGCGGTTGCCATC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 162; Mature: 161
Protein sequence:
>162_residues MPVFIPKSGEIYRGDERLPAPDPWIRHLAYLMDGAIPIGRWSIGLDPLIGMVPGIGDLLGALISMVIVVRAVQAGVPRVA VARMLANITIDTLVGSIPLFGDAFDFAFKSNLKNLRIYEESLLDRRASTVRHWWFFLLLFLVVVAGFAAIAVGLFALARR VF
Sequences:
>Translated_162_residues MPVFIPKSGEIYRGDERLPAPDPWIRHLAYLMDGAIPIGRWSIGLDPLIGMVPGIGDLLGALISMVIVVRAVQAGVPRVA VARMLANITIDTLVGSIPLFGDAFDFAFKSNLKNLRIYEESLLDRRASTVRHWWFFLLLFLVVVAGFAAIAVGLFALARR VF >Mature_161_residues PVFIPKSGEIYRGDERLPAPDPWIRHLAYLMDGAIPIGRWSIGLDPLIGMVPGIGDLLGALISMVIVVRAVQAGVPRVAV ARMLANITIDTLVGSIPLFGDAFDFAFKSNLKNLRIYEESLLDRRASTVRHWWFFLLLFLVVVAGFAAIAVGLFALARRV F
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 17862; Mature: 17730
Theoretical pI: Translated: 10.09; Mature: 10.09
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPVFIPKSGEIYRGDERLPAPDPWIRHLAYLMDGAIPIGRWSIGLDPLIGMVPGIGDLLG CCEECCCCCCEEECCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCHHHHHHHCCCHHHHHH ALISMVIVVRAVQAGVPRVAVARMLANITIDTLVGSIPLFGDAFDFAFKSNLKNLRIYEE HHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCHHHHHHH SLLDRRASTVRHWWFFLLLFLVVVAGFAAIAVGLFALARRVF HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure PVFIPKSGEIYRGDERLPAPDPWIRHLAYLMDGAIPIGRWSIGLDPLIGMVPGIGDLLG CEECCCCCCEEECCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCHHHHHHHCCCHHHHHH ALISMVIVVRAVQAGVPRVAVARMLANITIDTLVGSIPLFGDAFDFAFKSNLKNLRIYEE HHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCHHHHHHH SLLDRRASTVRHWWFFLLLFLVVVAGFAAIAVGLFALARRVF HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA