| Definition | Candidatus Solibacter usitatus Ellin6076 chromosome, complete genome. |
|---|---|
| Accession | NC_008536 |
| Length | 9,965,640 |
Click here to switch to the map view.
The map label for this gene is yveL [H]
Identifier: 116620768
GI number: 116620768
Start: 2043847
End: 2044557
Strand: Direct
Name: yveL [H]
Synonym: Acid_1649
Alternate gene names: 116620768
Gene position: 2043847-2044557 (Clockwise)
Preceding gene: 116620767
Following gene: 116620773
Centisome position: 20.51
GC content: 59.07
Gene sequence:
>711_bases ATGTTGACCGAGGTCGTGGTGGTGCCGTTTTCGCCTGCTCCGGAATCGCACCTGCTGGATCTCAACAACTCGCACGAAAC ACCGGCGGAGGAGTTCCGCACGTTGCGCACTCGGCTCAACCATTTGCAAAGCCTGCAGCCGCTGCACACCATCGTCGTGA CGAGCCCATCGCCTGCCGAAGGAAAGACGTTCACGGCGGTCAACCTGGCGCTGGCGCAATCGCACCTCGCGGAAAGTTCA GTACTCTTGGGCGATTTCGATTTGCGGCGCCCCATTGTGCACAATCTCTTCCAGATCGACCGGGCGCCGGGGTTGAGCGA CTTTCTGACGGGGCAGTGCACGTTCGCCCAGGCGATCCGCCGCGTGGAGGCAATGAATCTCTACCTGCTGCCGGCGGGCT CTCCGGTGAAAAATCCCCTCGAATTGCTCAACATGCGCACGGCCAAGATGCTCTTCGAAGAACTGCCGCGTAGTTTCAAC TGGGCAGTATTCGACACGCCGCCGCTGCTCTTCTCCGCCGACGCGAACCTGCTTTCGACCATGGCCGACGGGACTATTCT TGTGGTGAAGATCGGATCCACCACATTCGACAACGTGACACGCGCCATGCAATCGTTGTGCGAAAACAATGTCCTCGGCA TCGTCGCGAACGGCGCGCGCGCCTCTGAGTTGTATAGCAAGTACACCTACTACTATTCGAAGGCGGAATAA
Upstream 100 bases:
>100_bases AAATCCGGATCTTCGCCCGCCGGATCTTCCGGTGAACGGCGCTGCAACCGCCGCCGCGACGGCGCCGAGCGCTCCCTTGC GGCTCAACATTCATCCAAGC
Downstream 100 bases:
>100_bases GGTAAGGGCTGGTTCTGGATCACGAGAGGGAAGTTTTCCCTCTCGCGGACCAGGTAAGGGCTGCCAGATTAGCGCCAGTC GGCATGGTCGTGACGCCATC
Product: capsular polysaccharide biosynthesis protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 236; Mature: 236
Protein sequence:
>236_residues MLTEVVVVPFSPAPESHLLDLNNSHETPAEEFRTLRTRLNHLQSLQPLHTIVVTSPSPAEGKTFTAVNLALAQSHLAESS VLLGDFDLRRPIVHNLFQIDRAPGLSDFLTGQCTFAQAIRRVEAMNLYLLPAGSPVKNPLELLNMRTAKMLFEELPRSFN WAVFDTPPLLFSADANLLSTMADGTILVVKIGSTTFDNVTRAMQSLCENNVLGIVANGARASELYSKYTYYYSKAE
Sequences:
>Translated_236_residues MLTEVVVVPFSPAPESHLLDLNNSHETPAEEFRTLRTRLNHLQSLQPLHTIVVTSPSPAEGKTFTAVNLALAQSHLAESS VLLGDFDLRRPIVHNLFQIDRAPGLSDFLTGQCTFAQAIRRVEAMNLYLLPAGSPVKNPLELLNMRTAKMLFEELPRSFN WAVFDTPPLLFSADANLLSTMADGTILVVKIGSTTFDNVTRAMQSLCENNVLGIVANGARASELYSKYTYYYSKAE >Mature_236_residues MLTEVVVVPFSPAPESHLLDLNNSHETPAEEFRTLRTRLNHLQSLQPLHTIVVTSPSPAEGKTFTAVNLALAQSHLAESS VLLGDFDLRRPIVHNLFQIDRAPGLSDFLTGQCTFAQAIRRVEAMNLYLLPAGSPVKNPLELLNMRTAKMLFEELPRSFN WAVFDTPPLLFSADANLLSTMADGTILVVKIGSTTFDNVTRAMQSLCENNVLGIVANGARASELYSKYTYYYSKAE
Specific function: Required For The Extracellular Polysaccharide Colanic Acid Synthesis. The Autophosphorylated Form Is Inactive. Probably Involved In The Export Of Colanic Acid From The Cell To Medium. [C]
COG id: COG0489
COG function: function code D; ATPases involved in chromosome partitioning
Gene ontology:
Cell location: Inner membrane (Probable) [C]
Metaboloic importance: Non Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the CpsD/CapB family [H]
Homologues:
Organism=Escherichia coli, GI87082032, Length=221, Percent_Identity=30.316742081448, Blast_Score=93, Evalue=2e-20, Organism=Escherichia coli, GI1787216, Length=210, Percent_Identity=31.4285714285714, Blast_Score=92, Evalue=4e-20,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002586 - InterPro: IPR005702 [H]
Pfam domain/function: PF01656 CbiA [H]
EC number: =2.7.10.2 [H]
Molecular weight: Translated: 26080; Mature: 26080
Theoretical pI: Translated: 5.93; Mature: 5.93
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLTEVVVVPFSPAPESHLLDLNNSHETPAEEFRTLRTRLNHLQSLQPLHTIVVTSPSPAE CCCEEEEEECCCCCCCEEEECCCCCCCHHHHHHHHHHHHHHHHHCCCEEEEEEECCCCCC GKTFTAVNLALAQSHLAESSVLLGDFDLRRPIVHNLFQIDRAPGLSDFLTGQCTFAQAIR CCEEEHHHHHHHHHHHHHCCEEECCCHHHHHHHHHHHHHHCCCCHHHHHCCCCHHHHHHH RVEAMNLYLLPAGSPVKNPLELLNMRTAKMLFEELPRSFNWAVFDTPPLLFSADANLLST HHHHCEEEEEECCCCCCCHHHHHHHHHHHHHHHHCCCCCCEEEECCCCEEEECCHHHHHH MADGTILVVKIGSTTFDNVTRAMQSLCENNVLGIVANGARASELYSKYTYYYSKAE HCCCEEEEEEECCCCHHHHHHHHHHHHCCCCEEEEECCCHHHHHHHHHHHEEECCC >Mature Secondary Structure MLTEVVVVPFSPAPESHLLDLNNSHETPAEEFRTLRTRLNHLQSLQPLHTIVVTSPSPAE CCCEEEEEECCCCCCCEEEECCCCCCCHHHHHHHHHHHHHHHHHCCCEEEEEEECCCCCC GKTFTAVNLALAQSHLAESSVLLGDFDLRRPIVHNLFQIDRAPGLSDFLTGQCTFAQAIR CCEEEHHHHHHHHHHHHHCCEEECCCHHHHHHHHHHHHHHCCCCHHHHHCCCCHHHHHHH RVEAMNLYLLPAGSPVKNPLELLNMRTAKMLFEELPRSFNWAVFDTPPLLFSADANLLST HHHHCEEEEEECCCCCCCHHHHHHHHHHHHHHHHCCCCCCEEEECCCCEEEECCHHHHHH MADGTILVVKIGSTTFDNVTRAMQSLCENNVLGIVANGARASELYSKYTYYYSKAE HCCCEEEEEEECCCCHHHHHHHHHHHHCCCCEEEEECCCHHHHHHHHHHHEEECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 8969506; 9384377 [H]