| Definition | Candidatus Solibacter usitatus Ellin6076 chromosome, complete genome. |
|---|---|
| Accession | NC_008536 |
| Length | 9,965,640 |
Click here to switch to the map view.
The map label for this gene is 116620717
Identifier: 116620717
GI number: 116620717
Start: 1962327
End: 1963016
Strand: Direct
Name: 116620717
Synonym: Acid_1597
Alternate gene names: NA
Gene position: 1962327-1963016 (Clockwise)
Preceding gene: 116620716
Following gene: 116620719
Centisome position: 19.69
GC content: 59.86
Gene sequence:
>690_bases ATGCGCTTAGTTCCTTTCACACTGGCATTGGCGATGGGATGCATGACGCTCGTCGCAGCGGATGAAAAAAGTAAGACAGC GGAGCGGCTGGATGATTCGGCAAGTCTGTTCTCCGAAATCATGGGCACTCCAGACAAATCGATTCCCCAGGACCTGCTGG ACAAGGCCTATTGCATCGTCCTGGTGCCGGGCTTGAAGAAAGCCGCTTTCGGAATTGGCGGGAAGTATGGCCGCGGCTTC GCGGTTTGCCGCCAAACCGGCGGCCAGGGTTGGGGTCCTCCGGCGGCCATGCGCGTGGAAGGCGGCAGCGTCGGATTTCA GATCGGCGTCTCTTCGAGCGACGTGATTCTGCTGGTGATGAACGAAGGCGGGATGAAGAAGCTCAGCAGCAGCAAATTCA CGATCGGCGCGGATGCCACGGCGGCGGCCGGTCCGGTAGGGCGTAATGCCACGGCGCAGACGGACGCCTTCATGACCGCC GAAATTCTCTCTTGGTCGCGCTCCAAAGGACTGTTCGCGGGGATTTCGCTGGATGGCGCCACGCTGCGCAACGATCTGGA CGAAAACCAGGTGCTCTATGGCCAGCGCTGGACCATGAAGGATATTCTCGGCAGCGGAGCAACCATGCCGCAGGCGGCAT CGAAGTTGATCGCGGGATTAAATAAGTACTCGCCGCGCCAGGGCAAATAG
Upstream 100 bases:
>100_bases GACAAGGCGGAGCTGCGGCGGCCGGCGCAGGGTGACATGCCGGAAGATAAAGTGCCGATGGTTCGCTCGCGATAAGTTTG GGCGCGGTAAGCTTATTACC
Downstream 100 bases:
>100_bases CGCCAGGCTGGCTTTCACGATTACAGGGTCAGGGTCACCTTGGTGAGGGTGCGGGGCTTGTCGGGGTCGAGGCCCTTTTG CGCGGCAAGGCAGGCGGCGA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 229; Mature: 229
Protein sequence:
>229_residues MRLVPFTLALAMGCMTLVAADEKSKTAERLDDSASLFSEIMGTPDKSIPQDLLDKAYCIVLVPGLKKAAFGIGGKYGRGF AVCRQTGGQGWGPPAAMRVEGGSVGFQIGVSSSDVILLVMNEGGMKKLSSSKFTIGADATAAAGPVGRNATAQTDAFMTA EILSWSRSKGLFAGISLDGATLRNDLDENQVLYGQRWTMKDILGSGATMPQAASKLIAGLNKYSPRQGK
Sequences:
>Translated_229_residues MRLVPFTLALAMGCMTLVAADEKSKTAERLDDSASLFSEIMGTPDKSIPQDLLDKAYCIVLVPGLKKAAFGIGGKYGRGF AVCRQTGGQGWGPPAAMRVEGGSVGFQIGVSSSDVILLVMNEGGMKKLSSSKFTIGADATAAAGPVGRNATAQTDAFMTA EILSWSRSKGLFAGISLDGATLRNDLDENQVLYGQRWTMKDILGSGATMPQAASKLIAGLNKYSPRQGK >Mature_229_residues MRLVPFTLALAMGCMTLVAADEKSKTAERLDDSASLFSEIMGTPDKSIPQDLLDKAYCIVLVPGLKKAAFGIGGKYGRGF AVCRQTGGQGWGPPAAMRVEGGSVGFQIGVSSSDVILLVMNEGGMKKLSSSKFTIGADATAAAGPVGRNATAQTDAFMTA EILSWSRSKGLFAGISLDGATLRNDLDENQVLYGQRWTMKDILGSGATMPQAASKLIAGLNKYSPRQGK
Specific function: Unknown
COG id: COG2930
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Homo sapiens, GI227430336, Length=193, Percent_Identity=30.0518134715026, Blast_Score=86, Evalue=2e-17, Organism=Homo sapiens, GI227430338, Length=193, Percent_Identity=30.0518134715026, Blast_Score=86, Evalue=3e-17, Organism=Saccharomyces cerevisiae, GI6321804, Length=176, Percent_Identity=31.8181818181818, Blast_Score=68, Evalue=2e-12, Organism=Saccharomyces cerevisiae, GI6321137, Length=191, Percent_Identity=30.8900523560209, Blast_Score=65, Evalue=7e-12,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 23977; Mature: 23977
Theoretical pI: Translated: 9.46; Mature: 9.46
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 4.4 %Met (Translated Protein) 5.7 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 4.4 %Met (Mature Protein) 5.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRLVPFTLALAMGCMTLVAADEKSKTAERLDDSASLFSEIMGTPDKSIPQDLLDKAYCIV CCCCHHHHHHHHHHHHHHHCCCHHHHHHHHCHHHHHHHHHHCCCCCCCHHHHHCCCEEEE LVPGLKKAAFGIGGKYGRGFAVCRQTGGQGWGPPAAMRVEGGSVGFQIGVSSSDVILLVM EECCCHHHHHCCCCCCCCHHHHHHHCCCCCCCCCCEEEECCCCEEEEEECCCCCEEEEEE NEGGMKKLSSSKFTIGADATAAAGPVGRNATAQTDAFMTAEILSWSRSKGLFAGISLDGA CCCCCCHHCCCCEEECCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCEEEEEECCCH TLRNDLDENQVLYGQRWTMKDILGSGATMPQAASKLIAGLNKYSPRQGK HHHCCCCCCCEEECCCCCHHHHHCCCCCCHHHHHHHHHHHHHCCCCCCC >Mature Secondary Structure MRLVPFTLALAMGCMTLVAADEKSKTAERLDDSASLFSEIMGTPDKSIPQDLLDKAYCIV CCCCHHHHHHHHHHHHHHHCCCHHHHHHHHCHHHHHHHHHHCCCCCCCHHHHHCCCEEEE LVPGLKKAAFGIGGKYGRGFAVCRQTGGQGWGPPAAMRVEGGSVGFQIGVSSSDVILLVM EECCCHHHHHCCCCCCCCHHHHHHHCCCCCCCCCCEEEECCCCEEEEEECCCCCEEEEEE NEGGMKKLSSSKFTIGADATAAAGPVGRNATAQTDAFMTAEILSWSRSKGLFAGISLDGA CCCCCCHHCCCCEEECCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCEEEEEECCCH TLRNDLDENQVLYGQRWTMKDILGSGATMPQAASKLIAGLNKYSPRQGK HHHCCCCCCCEEECCCCCHHHHHCCCCCCHHHHHHHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA