| Definition | Candidatus Solibacter usitatus Ellin6076 chromosome, complete genome. |
|---|---|
| Accession | NC_008536 |
| Length | 9,965,640 |
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The map label for this gene is zntR [C]
Identifier: 116620661
GI number: 116620661
Start: 1892965
End: 1893498
Strand: Direct
Name: zntR [C]
Synonym: Acid_1541
Alternate gene names: 116620661
Gene position: 1892965-1893498 (Clockwise)
Preceding gene: 116620660
Following gene: 116620662
Centisome position: 18.99
GC content: 63.86
Gene sequence:
>534_bases ATGACACTGACCGTCACCCGGCTGGCGCGCGAGTGCAAGCTTTCGCGCAGCACGGTCCTCTATTACGAGTCGATCGGACT GCTCCGCCGACCGCGGCGCAGCGACGGCAACTACCGCGTCTATGGCGACCGCGATGTGGAACGCCTGCGCCAGATCTGCG TCTATCGCGACGCCGGACTGGCGCTCGCCGATATCCGGTCCGTCCTGGACACTCCGCCCAGCGACGCAGCCTCCGTACTG CGGCGTCGCATGGCGGAACTCAGCGTGGGGATCGAACGGATGCGCGAACATCAGCGGGCCATCGCCCGGTTGCTCAAGGG CGCCGGAAAACTCTCGAAGGAGAAAGACATGGTTACCAAACAGAAGTGGACCGCGATCATGAGCGCGGCCGGTTTTTCCG AAGACGATATGCGCCGCTGGCACCGCGAGTTCGAAAAGTCCGCCCCGGCCGAACACCAGGAGTTCCTCGAGTTCCTGCAC ATTCCCCCGGACGAGATCAAAACCATCCGCGCCTGGAGCGCTGCCGTTCGATAA
Upstream 100 bases:
>100_bases ATGGATCGCGTGATCGAAGATCTTCCCCGGCAGCACATTTTGATTCTCAAAAAATAAGCTTGACCTGTCTAAAGCTTGAG GGTTGACACTTAATAAAGCG
Downstream 100 bases:
>100_bases CATAACGATCCACGTACACTGAAAGGATGTCGGCCGCCATCCTTGTCCGCGATCTCCGCAAGTCTTACGGACTCAAAGCT GCCGTGGATGGTGTCGATCT
Product: MerR family transcriptional regulator
Products: NA
Alternate protein names: Transcriptional Regulator MerR Family; Transcriptional Regulator; SAM-Dependent Methyltransferase; Transcriptional Activator; TipAS Antibiotic-Recognition Domain-Containing Protein; Regulatory Protein; Albicidin Resistance Protein; Regulatory Protein MerR
Number of amino acids: Translated: 177; Mature: 176
Protein sequence:
>177_residues MTLTVTRLARECKLSRSTVLYYESIGLLRRPRRSDGNYRVYGDRDVERLRQICVYRDAGLALADIRSVLDTPPSDAASVL RRRMAELSVGIERMREHQRAIARLLKGAGKLSKEKDMVTKQKWTAIMSAAGFSEDDMRRWHREFEKSAPAEHQEFLEFLH IPPDEIKTIRAWSAAVR
Sequences:
>Translated_177_residues MTLTVTRLARECKLSRSTVLYYESIGLLRRPRRSDGNYRVYGDRDVERLRQICVYRDAGLALADIRSVLDTPPSDAASVL RRRMAELSVGIERMREHQRAIARLLKGAGKLSKEKDMVTKQKWTAIMSAAGFSEDDMRRWHREFEKSAPAEHQEFLEFLH IPPDEIKTIRAWSAAVR >Mature_176_residues TLTVTRLARECKLSRSTVLYYESIGLLRRPRRSDGNYRVYGDRDVERLRQICVYRDAGLALADIRSVLDTPPSDAASVLR RRMAELSVGIERMREHQRAIARLLKGAGKLSKEKDMVTKQKWTAIMSAAGFSEDDMRRWHREFEKSAPAEHQEFLEFLHI PPDEIKTIRAWSAAVR
Specific function: Zinc-Responsive Transcriptional Regulator Of Znta. [C]
COG id: COG0789
COG function: function code K; Predicted transcriptional regulators
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 20475; Mature: 20344
Theoretical pI: Translated: 10.39; Mature: 10.39
Prosite motif: PS50937 HTH_MERR_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 3.4 %Met (Translated Protein) 4.5 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 4.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTLTVTRLARECKLSRSTVLYYESIGLLRRPRRSDGNYRVYGDRDVERLRQICVYRDAGL CCCHHHHHHHHHHHCHHHHHHHHHHHHHHCCCCCCCCEEEECCHHHHHHHHHHHHHCCCH ALADIRSVLDTPPSDAASVLRRRMAELSVGIERMREHQRAIARLLKGAGKLSKEKDMVTK HHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHH QKWTAIMSAAGFSEDDMRRWHREFEKSAPAEHQEFLEFLHIPPDEIKTIRAWSAAVR HHHHHHHHHCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHCCCHHHHHHHHHHHHHCC >Mature Secondary Structure TLTVTRLARECKLSRSTVLYYESIGLLRRPRRSDGNYRVYGDRDVERLRQICVYRDAGL CCHHHHHHHHHHHCHHHHHHHHHHHHHHCCCCCCCCEEEECCHHHHHHHHHHHHHCCCH ALADIRSVLDTPPSDAASVLRRRMAELSVGIERMREHQRAIARLLKGAGKLSKEKDMVTK HHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHH QKWTAIMSAAGFSEDDMRRWHREFEKSAPAEHQEFLEFLHIPPDEIKTIRAWSAAVR HHHHHHHHHCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHCCCHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: DNA [C]
Specific reaction: Protein + DNA = Protein-DNA [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA