| Definition | Candidatus Solibacter usitatus Ellin6076 chromosome, complete genome. |
|---|---|
| Accession | NC_008536 |
| Length | 9,965,640 |
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The map label for this gene is 116620632
Identifier: 116620632
GI number: 116620632
Start: 1853371
End: 1854096
Strand: Direct
Name: 116620632
Synonym: Acid_1511
Alternate gene names: NA
Gene position: 1853371-1854096 (Clockwise)
Preceding gene: 116620631
Following gene: 116620633
Centisome position: 18.6
GC content: 65.43
Gene sequence:
>726_bases GTGAGCTTTTCGCGAATCGATTCCCACCAGCATTTCACGCGCGAGTATCTGCCCACACTGCTTTTTCCCATTCTGAAGCG CAACCGGTTCGAGGGCAGCGTAGTGGTGTGCGAACAGGCGGGCGTTGAGGAGAACCGCTGGCTGCTGGGGCTGGCGGCCG AGCACGAGTTCATTCGCGGAGTGGTCTGCGGCGTGGATCTCGGGGATGCGGCGCTGCCGGCGCTGCTGGATGAATATCAG GAGCACGCGAAATTTCGCGGAGTGTACGCCGATGGGGGGAGTGCCGCCGAGATTGCACGGCGCGGCCTCACGCTCGATGT GCCGCCGCGGTTTGGCGAAGCTGCACGGCTCGCGGCGGCCCATCCTTTGCTCCGGATTGCGATCGATCATGTGGGCAGGC CTTCGCTGATGAGCGAGGGGGTCAACGAACTCACGGCGCTCGCGCGCTTTCCCAATGTCTGCGTGAAGCTGAGCGGTTTG ATCACCGATGCACCGACGCAGTGGAAGGCCGCCGAGTTCGCGCCCTGGGCTCGCGCCGCGCTTGCCGCGTTTGGTGCGGA GCGTGTGATGTTTGGCAGTGACTGGCCCAGCTACCTGCCCGTGGGCACGTGGAAGGAAGCGCTGGCGGCCTTCACGCAGG CTATCGGCGCGCAGGACCTGGAGACTCGCGAGCAATTGCTGGGCGCCACGGCGGACCGCTTCTACCGCCTGGGAGACGGG GCTTGA
Upstream 100 bases:
>100_bases GGCCCAGGGCTACCTGCCGCTCAACGTGGCCGGAGGCCAGAGCATCACGCTGGTGGAGACACCGCGCAGCTTCCGCGGGG GACTGAGTTTCATTTTCTAA
Downstream 100 bases:
>100_bases GGCTCGATATCGCCGCGACGGTCGCACTGGCGGCGCTCAATCTCTCCATTTCGTGGCGGTTGCTGAAGATCGAGTACATC AACCAGCTGGCGAGTGTGGA
Product: amidohydrolase 2
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 241; Mature: 240
Protein sequence:
>241_residues MSFSRIDSHQHFTREYLPTLLFPILKRNRFEGSVVVCEQAGVEENRWLLGLAAEHEFIRGVVCGVDLGDAALPALLDEYQ EHAKFRGVYADGGSAAEIARRGLTLDVPPRFGEAARLAAAHPLLRIAIDHVGRPSLMSEGVNELTALARFPNVCVKLSGL ITDAPTQWKAAEFAPWARAALAAFGAERVMFGSDWPSYLPVGTWKEALAAFTQAIGAQDLETREQLLGATADRFYRLGDG A
Sequences:
>Translated_241_residues MSFSRIDSHQHFTREYLPTLLFPILKRNRFEGSVVVCEQAGVEENRWLLGLAAEHEFIRGVVCGVDLGDAALPALLDEYQ EHAKFRGVYADGGSAAEIARRGLTLDVPPRFGEAARLAAAHPLLRIAIDHVGRPSLMSEGVNELTALARFPNVCVKLSGL ITDAPTQWKAAEFAPWARAALAAFGAERVMFGSDWPSYLPVGTWKEALAAFTQAIGAQDLETREQLLGATADRFYRLGDG A >Mature_240_residues SFSRIDSHQHFTREYLPTLLFPILKRNRFEGSVVVCEQAGVEENRWLLGLAAEHEFIRGVVCGVDLGDAALPALLDEYQE HAKFRGVYADGGSAAEIARRGLTLDVPPRFGEAARLAAAHPLLRIAIDHVGRPSLMSEGVNELTALARFPNVCVKLSGLI TDAPTQWKAAEFAPWARAALAAFGAERVMFGSDWPSYLPVGTWKEALAAFTQAIGAQDLETREQLLGATADRFYRLGDGA
Specific function: Unknown
COG id: COG3618
COG function: function code R; Predicted metal-dependent hydrolase of the TIM-barrel fold
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR006992 [H]
Pfam domain/function: PF04909 Amidohydro_2 [H]
EC number: NA
Molecular weight: Translated: 26307; Mature: 26176
Theoretical pI: Translated: 5.64; Mature: 5.64
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 0.8 %Met (Mature Protein) 2.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSFSRIDSHQHFTREYLPTLLFPILKRNRFEGSVVVCEQAGVEENRWLLGLAAEHEFIRG CCCHHHCCHHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCCCCEEEEEHHHHHHHHH VVCGVDLGDAALPALLDEYQEHAKFRGVYADGGSAAEIARRGLTLDVPPRFGEAARLAAA HHHCCCCCHHHHHHHHHHHHHHHHHCCEECCCCCHHHHHHCCCEEECCCCCCHHHHHHHH HPLLRIAIDHVGRPSLMSEGVNELTALARFPNVCVKLSGLITDAPTQWKAAEFAPWARAA HHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHCCHHHHHH LAAFGAERVMFGSDWPSYLPVGTWKEALAAFTQAIGAQDLETREQLLGATADRFYRLGDG HHHHCHHHEEECCCCCCCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCC A C >Mature Secondary Structure SFSRIDSHQHFTREYLPTLLFPILKRNRFEGSVVVCEQAGVEENRWLLGLAAEHEFIRG CCHHHCCHHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCCCCEEEEEHHHHHHHHH VVCGVDLGDAALPALLDEYQEHAKFRGVYADGGSAAEIARRGLTLDVPPRFGEAARLAAA HHHCCCCCHHHHHHHHHHHHHHHHHCCEECCCCCHHHHHHCCCEEECCCCCCHHHHHHHH HPLLRIAIDHVGRPSLMSEGVNELTALARFPNVCVKLSGLITDAPTQWKAAEFAPWARAA HHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHCCHHHHHH LAAFGAERVMFGSDWPSYLPVGTWKEALAAFTQAIGAQDLETREQLLGATADRFYRLGDG HHHHCHHHEEECCCCCCCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCC A C
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9163424 [H]