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The map label for this gene is ybbK [C]

Identifier: 116620620

GI number: 116620620

Start: 1837622

End: 1838416

Strand: Direct

Name: ybbK [C]

Synonym: Acid_1499

Alternate gene names: 116620620

Gene position: 1837622-1838416 (Clockwise)

Preceding gene: 116620619

Following gene: 116620621

Centisome position: 18.44

GC content: 60.63

Gene sequence:

>795_bases
ATGAACGATCTAAGTCCGGTGGTATTGGTCTTCGTGCTGGTGGTCGGCATCTGGCTGCTGAATTCGATCAAGATTCTGCG
CGAATATGAGCGCGGCGTGATTTTTCGGCTGGGGCGGCTGCTGCCGGAGCCTAAGGGTCCGGGATTGGTTTTTGTATTTG
GCCCGTTCGACCGCATGGTGCGGGTCTCGCTGCGCCTCGAAGCGCTGGAAGTTCCGGCGCAGGACGTGGTCACGCGCGAC
AACGTCACCGTGAAGGTGAACGCGGTGATTTATTCGCGGGTGATCGACCCGCGGCTGGCGGTGGTGGAGGTGACCAACTT
CGTCTACGCCACGTCGCAGCTGGCGCAGACCACGCTGCGCAGCGTACTTGGAGAAGTGGAACTGGACGAGTTGTTGAGCC
AGCGTGAAAAGCTGAATGTGCGGCTGCAATCCATTCTGGACCAGCACACGTCACCGTGGGGAGTGAAGGTGACGATGGTG
GAGGTGAAGCAGGTGGATCTGGCGGAGCAGATGATCCGCGCGCTCTCGCGGCAGGCCGAGGCGGAACGGGAACGCCGCGC
GAAAATAATTCACGCCGAGGGCGAGTACACGGCCGCGGAGAAGCTGAGCATGGCGGCCGAAGTGATCCAAAAGCAGCCGG
CGGCGATCCAGTTGCGTTACCTGCAGACGCTGGTGGAGATCGGCGCCGAGAAAAATACGACCATCGTTTTCCCCTTGCCA
CTCGATATAATTGCTTCGTTGGGCCGCGCGCTCGACCGAGTTGGGAGTAGCGGCACGGCCACGGGAAATCCATAA

Upstream 100 bases:

>100_bases
TCGCGGTACGTCCCGCCGAGGCAGGCGCGCGCGTCAAGGTGACCGCGATCGACGGGCTGAGGGTGACGGTGGAACCCATG
TAGCTGTTGAGGAGCCAACT

Downstream 100 bases:

>100_bases
ACCATGCGAAACAATGACACCGGCGAATTCGAACTGGTAGTAGGCAACAAACAGCTTTTGAGCGGGTTTTTTATCGTGGT
GCTGCTGTTCGCAGTCGCGT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 264; Mature: 264

Protein sequence:

>264_residues
MNDLSPVVLVFVLVVGIWLLNSIKILREYERGVIFRLGRLLPEPKGPGLVFVFGPFDRMVRVSLRLEALEVPAQDVVTRD
NVTVKVNAVIYSRVIDPRLAVVEVTNFVYATSQLAQTTLRSVLGEVELDELLSQREKLNVRLQSILDQHTSPWGVKVTMV
EVKQVDLAEQMIRALSRQAEAERERRAKIIHAEGEYTAAEKLSMAAEVIQKQPAAIQLRYLQTLVEIGAEKNTTIVFPLP
LDIIASLGRALDRVGSSGTATGNP

Sequences:

>Translated_264_residues
MNDLSPVVLVFVLVVGIWLLNSIKILREYERGVIFRLGRLLPEPKGPGLVFVFGPFDRMVRVSLRLEALEVPAQDVVTRD
NVTVKVNAVIYSRVIDPRLAVVEVTNFVYATSQLAQTTLRSVLGEVELDELLSQREKLNVRLQSILDQHTSPWGVKVTMV
EVKQVDLAEQMIRALSRQAEAERERRAKIIHAEGEYTAAEKLSMAAEVIQKQPAAIQLRYLQTLVEIGAEKNTTIVFPLP
LDIIASLGRALDRVGSSGTATGNP
>Mature_264_residues
MNDLSPVVLVFVLVVGIWLLNSIKILREYERGVIFRLGRLLPEPKGPGLVFVFGPFDRMVRVSLRLEALEVPAQDVVTRD
NVTVKVNAVIYSRVIDPRLAVVEVTNFVYATSQLAQTTLRSVLGEVELDELLSQREKLNVRLQSILDQHTSPWGVKVTMV
EVKQVDLAEQMIRALSRQAEAERERRAKIIHAEGEYTAAEKLSMAAEVIQKQPAAIQLRYLQTLVEIGAEKNTTIVFPLP
LDIIASLGRALDRVGSSGTATGNP

Specific function: Unknown

COG id: COG0330

COG function: function code O; Membrane protease subunits, stomatin/prohibitin homologs

Gene ontology:

Cell location: Membrane; Single-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the band 7/mec-2 family [H]

Homologues:

Organism=Homo sapiens, GI38016911, Length=242, Percent_Identity=49.1735537190083, Blast_Score=208, Evalue=4e-54,
Organism=Homo sapiens, GI221316744, Length=247, Percent_Identity=43.7246963562753, Blast_Score=194, Evalue=5e-50,
Organism=Homo sapiens, GI21686995, Length=246, Percent_Identity=43.9024390243902, Blast_Score=194, Evalue=7e-50,
Organism=Homo sapiens, GI7657615, Length=255, Percent_Identity=37.6470588235294, Blast_Score=167, Evalue=1e-41,
Organism=Homo sapiens, GI7305503, Length=175, Percent_Identity=36, Blast_Score=108, Evalue=7e-24,
Organism=Homo sapiens, GI20149563, Length=158, Percent_Identity=33.5443037974684, Blast_Score=80, Evalue=1e-15,
Organism=Homo sapiens, GI38016907, Length=57, Percent_Identity=61.4035087719298, Blast_Score=74, Evalue=2e-13,
Organism=Escherichia coli, GI1786697, Length=188, Percent_Identity=38.2978723404255, Blast_Score=130, Evalue=7e-32,
Organism=Caenorhabditis elegans, GI17569493, Length=257, Percent_Identity=46.3035019455253, Blast_Score=225, Evalue=2e-59,
Organism=Caenorhabditis elegans, GI193209764, Length=242, Percent_Identity=46.6942148760331, Blast_Score=218, Evalue=2e-57,
Organism=Caenorhabditis elegans, GI71987612, Length=245, Percent_Identity=48.5714285714286, Blast_Score=209, Evalue=1e-54,
Organism=Caenorhabditis elegans, GI25153583, Length=245, Percent_Identity=48.5714285714286, Blast_Score=209, Evalue=2e-54,
Organism=Caenorhabditis elegans, GI71987621, Length=245, Percent_Identity=48.5714285714286, Blast_Score=207, Evalue=6e-54,
Organism=Caenorhabditis elegans, GI17569497, Length=251, Percent_Identity=41.4342629482072, Blast_Score=198, Evalue=3e-51,
Organism=Caenorhabditis elegans, GI17570459, Length=253, Percent_Identity=44.6640316205534, Blast_Score=195, Evalue=2e-50,
Organism=Caenorhabditis elegans, GI17569499, Length=245, Percent_Identity=45.3061224489796, Blast_Score=193, Evalue=6e-50,
Organism=Caenorhabditis elegans, GI71989948, Length=228, Percent_Identity=47.8070175438597, Blast_Score=189, Evalue=1e-48,
Organism=Caenorhabditis elegans, GI193210507, Length=227, Percent_Identity=46.2555066079295, Blast_Score=187, Evalue=6e-48,
Organism=Caenorhabditis elegans, GI17570161, Length=227, Percent_Identity=46.2555066079295, Blast_Score=187, Evalue=6e-48,
Organism=Caenorhabditis elegans, GI32566490, Length=229, Percent_Identity=47.1615720524017, Blast_Score=174, Evalue=5e-44,
Organism=Caenorhabditis elegans, GI71989955, Length=185, Percent_Identity=47.5675675675676, Blast_Score=145, Evalue=2e-35,
Organism=Caenorhabditis elegans, GI71989963, Length=123, Percent_Identity=48.780487804878, Blast_Score=112, Evalue=2e-25,
Organism=Caenorhabditis elegans, GI32564147, Length=181, Percent_Identity=34.2541436464088, Blast_Score=105, Evalue=2e-23,
Organism=Caenorhabditis elegans, GI17542664, Length=180, Percent_Identity=27.2222222222222, Blast_Score=68, Evalue=6e-12,
Organism=Drosophila melanogaster, GI18860517, Length=237, Percent_Identity=47.2573839662447, Blast_Score=205, Evalue=3e-53,
Organism=Drosophila melanogaster, GI45556022, Length=238, Percent_Identity=48.7394957983193, Blast_Score=204, Evalue=5e-53,
Organism=Drosophila melanogaster, GI24657857, Length=238, Percent_Identity=48.7394957983193, Blast_Score=198, Evalue=4e-51,
Organism=Drosophila melanogaster, GI281365664, Length=238, Percent_Identity=48.7394957983193, Blast_Score=197, Evalue=4e-51,
Organism=Drosophila melanogaster, GI62484448, Length=238, Percent_Identity=48.7394957983193, Blast_Score=197, Evalue=4e-51,
Organism=Drosophila melanogaster, GI62484274, Length=238, Percent_Identity=48.7394957983193, Blast_Score=196, Evalue=9e-51,
Organism=Drosophila melanogaster, GI28573263, Length=243, Percent_Identity=39.0946502057613, Blast_Score=186, Evalue=1e-47,
Organism=Drosophila melanogaster, GI281361633, Length=236, Percent_Identity=37.7118644067797, Blast_Score=165, Evalue=3e-41,
Organism=Drosophila melanogaster, GI281361631, Length=236, Percent_Identity=37.7118644067797, Blast_Score=165, Evalue=3e-41,
Organism=Drosophila melanogaster, GI21356845, Length=240, Percent_Identity=36.6666666666667, Blast_Score=163, Evalue=1e-40,
Organism=Drosophila melanogaster, GI281361635, Length=181, Percent_Identity=38.6740331491713, Blast_Score=129, Evalue=2e-30,
Organism=Drosophila melanogaster, GI45550506, Length=168, Percent_Identity=36.3095238095238, Blast_Score=108, Evalue=4e-24,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001107
- InterPro:   IPR018080
- InterPro:   IPR001972 [H]

Pfam domain/function: PF01145 Band_7 [H]

EC number: NA

Molecular weight: Translated: 29347; Mature: 29347

Theoretical pI: Translated: 7.67; Mature: 7.67

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
1.9 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
1.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNDLSPVVLVFVLVVGIWLLNSIKILREYERGVIFRLGRLLPEPKGPGLVFVFGPFDRMV
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEECCHHHHH
RVSLRLEALEVPAQDVVTRDNVTVKVNAVIYSRVIDPRLAVVEVTNFVYATSQLAQTTLR
HHHHHHHHHHCCHHHHEECCCEEEEEEHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHH
SVLGEVELDELLSQREKLNVRLQSILDQHTSPWGVKVTMVEVKQVDLAEQMIRALSRQAE
HHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEEHHHHHHHHHHHHHHHHHHH
AERERRAKIIHAEGEYTAAEKLSMAAEVIQKQPAAIQLRYLQTLVEIGAEKNTTIVFPLP
HHHHHHHEEEECCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCEEEEECC
LDIIASLGRALDRVGSSGTATGNP
HHHHHHHHHHHHHCCCCCCCCCCC
>Mature Secondary Structure
MNDLSPVVLVFVLVVGIWLLNSIKILREYERGVIFRLGRLLPEPKGPGLVFVFGPFDRMV
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEECCHHHHH
RVSLRLEALEVPAQDVVTRDNVTVKVNAVIYSRVIDPRLAVVEVTNFVYATSQLAQTTLR
HHHHHHHHHHCCHHHHEECCCEEEEEEHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHH
SVLGEVELDELLSQREKLNVRLQSILDQHTSPWGVKVTMVEVKQVDLAEQMIRALSRQAE
HHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEEHHHHHHHHHHHHHHHHHHH
AERERRAKIIHAEGEYTAAEKLSMAAEVIQKQPAAIQLRYLQTLVEIGAEKNTTIVFPLP
HHHHHHHEEEECCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCEEEEECC
LDIIASLGRALDRVGSSGTATGNP
HHHHHHHHHHHHHCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9389475 [H]