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The map label for this gene is 116620520

Identifier: 116620520

GI number: 116620520

Start: 1723961

End: 1725436

Strand: Direct

Name: 116620520

Synonym: Acid_1398

Alternate gene names: NA

Gene position: 1723961-1725436 (Clockwise)

Preceding gene: 116620519

Following gene: 116620521

Centisome position: 17.3

GC content: 64.09

Gene sequence:

>1476_bases
ATGATCACCAGACGAACGCTACTTGCCGGGTTTCCCGCTGTCTTAGCGGCTGCCCGCACCACTGCGCCGCCTTCCCCTTA
CGGGGCCATTCCTTCTGCCCGCCAACAGGCATGGCACGAACTCGAGTTCACCGGCTTCCTGCATTTCACGGTGAACACGT
TTACCGACAAGGAATGGGGATACGGCGACGAAGAGCCGGACATCTTCAATCCCGCGCGGTTCGACGCCGATGTCCTGGTA
GGCGCGCTGGCCGATGCCGGGATGCGCGGCGTGATCCTCACTTGCAAGCATCACGATGGCTTCTGCCTGTGGCCCACGCG
GACCACCGACCATTCGGTGGCGCAGAGCCGCTGGCGCGGAGGCCGCGGCGATGTGGTCCGGGAAATTTCACAGGCGGCAG
CGCGGCGCAAGATGAAGTTTGGCGTCTACCTTTCGCCCTGGGACCGCAATAGCGCGCAGTATGGGACGCCCGAGTACATC
AAGCTTTACCGCGCGCAGCTCTCGGAACTGCTCACCGGGTACGGCCCGATCTTCGAGGTCTGGCATGATGGCGCCAACGG
CGGCGACGGCTACTATGGCGGCGCGAAGGAGAAGCGCACCATCGATAAGAACACGTACTACGATTGGCCGCGCACGTGGG
AAATGATCCGCGCGATGCAACCCGAGGCTGTGGTCTTCAGCGACGTGGGGCCGGACGTGAGATGGGTGGGCAATGAGCGC
GGCGTTGCGGGCGACCCGTGCTGGGTGGCCTTCGATCCGGTGGGCGAGGATGGCGGCGCGGCGTCGCCGGGCAATGTGCG
GACCAAGGAGTCGGGAATGGGGCACCGTCACGGCTCCAAGTGGCTGCCGGCGGAGTGCGATGTGTCGATTCGTCCCGGAT
GGTTCTGGCACGAGGCGGAAAATGCGCGCGTGAAGAAGGCTTCGCAGCTGGTGAACCTCTATTACGAGTCGGTGGGGCGC
GGCGCGACATTGCTGCTGAACGTTCCGCCCAATCGCGACGGGCTGATTTCGTCGGAGGATGTCGCTTCGCTGAAAGGGCT
GGGCGGATATCTCAGCGGCACGTTCGCGCAGAATCTGGCGGCGCGCGCGAAGACTGACGCCACTCACGTACGCGGTAACG
ACAAGCAGTATGGTCCGGCGCAATTGTTGAACGGCAAGCCGGAGACCTTCTGGGCAACCGATGATGGCGTCACCAGCGCG
GACGTCACGTTCGATCTGGGTCGGCCGGTCAAATTCCAGGTGATCCGCTTGCGCGAGGCTATACGCTTCGGCCAGCGCGT
GGACGCATTCACGGTGGAACGCTGGCAATCGGATTCCTGGGAGCAGGTGGCGTCGTCCACAAGCATCGGGCCGCGCAGGC
TGATCCGGCTTGATGCGCCGATTATCGCCACGCGGTTGCGGCTGCGCGTCACGCAGGCATCGGCAAGCCCCGCATTGAGC
GAGTTCGCCGTCTTCGCGGAAGCGAATCTCGGTTGA

Upstream 100 bases:

>100_bases
CCAAGGTGAAAAAGGGTCGCGGCCGGCCTAAGAAGTAGAAGTCCCGAAGGCCTAAGGAAGTAGAAGTCCCGAAGGCTTAG
GAAGTAGAAGTCCCGAAGGC

Downstream 100 bases:

>100_bases
CCTCTGTGCCGCCGGCATACCTTTACTGGTTCTTTGCCGGACCTTCTTTACTGCTCGCTCTCCTCTCCCTTCGCGGCGAG
CGCAAACGGGCGGAATACGT

Product: coagulation factor 5/8 type domain-containing protein

Products: NA

Alternate protein names: Coagulation Factor 5/8 Type Domain Protein; Glycoside Hydrolase Family; Alpha-1 3/4-Fucosidase; Calx-Beta Domain-Containing Protein; Lipoprotein; Exported Alpha-L-Fucosidase Protein; Exported Fucosidase; Coagulation Factor 5/8 Type Domain-Containing Protein; Ig Domain-Containing; Twin-Arginine Translocation Pathway Signal; Tat Pathway Signal Sequence Domain Protein; Alpha-L-Fucosidase Protein; Alpha-L-Fucosidase Family Protein; Alpha-L-Fucosidase-Like Protein; Glycosyl Hydrolase; F5/8 Type C Domain-Containing Protein; DS Domain-Containing Protein

Number of amino acids: Translated: 491; Mature: 491

Protein sequence:

>491_residues
MITRRTLLAGFPAVLAAARTTAPPSPYGAIPSARQQAWHELEFTGFLHFTVNTFTDKEWGYGDEEPDIFNPARFDADVLV
GALADAGMRGVILTCKHHDGFCLWPTRTTDHSVAQSRWRGGRGDVVREISQAAARRKMKFGVYLSPWDRNSAQYGTPEYI
KLYRAQLSELLTGYGPIFEVWHDGANGGDGYYGGAKEKRTIDKNTYYDWPRTWEMIRAMQPEAVVFSDVGPDVRWVGNER
GVAGDPCWVAFDPVGEDGGAASPGNVRTKESGMGHRHGSKWLPAECDVSIRPGWFWHEAENARVKKASQLVNLYYESVGR
GATLLLNVPPNRDGLISSEDVASLKGLGGYLSGTFAQNLAARAKTDATHVRGNDKQYGPAQLLNGKPETFWATDDGVTSA
DVTFDLGRPVKFQVIRLREAIRFGQRVDAFTVERWQSDSWEQVASSTSIGPRRLIRLDAPIIATRLRLRVTQASASPALS
EFAVFAEANLG

Sequences:

>Translated_491_residues
MITRRTLLAGFPAVLAAARTTAPPSPYGAIPSARQQAWHELEFTGFLHFTVNTFTDKEWGYGDEEPDIFNPARFDADVLV
GALADAGMRGVILTCKHHDGFCLWPTRTTDHSVAQSRWRGGRGDVVREISQAAARRKMKFGVYLSPWDRNSAQYGTPEYI
KLYRAQLSELLTGYGPIFEVWHDGANGGDGYYGGAKEKRTIDKNTYYDWPRTWEMIRAMQPEAVVFSDVGPDVRWVGNER
GVAGDPCWVAFDPVGEDGGAASPGNVRTKESGMGHRHGSKWLPAECDVSIRPGWFWHEAENARVKKASQLVNLYYESVGR
GATLLLNVPPNRDGLISSEDVASLKGLGGYLSGTFAQNLAARAKTDATHVRGNDKQYGPAQLLNGKPETFWATDDGVTSA
DVTFDLGRPVKFQVIRLREAIRFGQRVDAFTVERWQSDSWEQVASSTSIGPRRLIRLDAPIIATRLRLRVTQASASPALS
EFAVFAEANLG
>Mature_491_residues
MITRRTLLAGFPAVLAAARTTAPPSPYGAIPSARQQAWHELEFTGFLHFTVNTFTDKEWGYGDEEPDIFNPARFDADVLV
GALADAGMRGVILTCKHHDGFCLWPTRTTDHSVAQSRWRGGRGDVVREISQAAARRKMKFGVYLSPWDRNSAQYGTPEYI
KLYRAQLSELLTGYGPIFEVWHDGANGGDGYYGGAKEKRTIDKNTYYDWPRTWEMIRAMQPEAVVFSDVGPDVRWVGNER
GVAGDPCWVAFDPVGEDGGAASPGNVRTKESGMGHRHGSKWLPAECDVSIRPGWFWHEAENARVKKASQLVNLYYESVGR
GATLLLNVPPNRDGLISSEDVASLKGLGGYLSGTFAQNLAARAKTDATHVRGNDKQYGPAQLLNGKPETFWATDDGVTSA
DVTFDLGRPVKFQVIRLREAIRFGQRVDAFTVERWQSDSWEQVASSTSIGPRRLIRLDAPIIATRLRLRVTQASASPALS
EFAVFAEANLG

Specific function: Unknown

COG id: COG3669

COG function: function code G; Alpha-L-fucosidase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 54230; Mature: 54230

Theoretical pI: Translated: 7.65; Mature: 7.65

Prosite motif: PS50022 FA58C_3

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
2.0 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
2.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MITRRTLLAGFPAVLAAARTTAPPSPYGAIPSARQQAWHELEFTGFLHFTVNTFTDKEWG
CCCCHHHHHCCHHHHHHHHCCCCCCCCCCCCHHHHHHHHHEEEEEEEEEEEEEECCCCCC
YGDEEPDIFNPARFDADVLVGALADAGMRGVILTCKHHDGFCLWPTRTTDHSVAQSRWRG
CCCCCCCCCCCCCCCHHHHHHHHHCCCCCEEEEEEEECCCEEECCCCCCCHHHHHHHCCC
GRGDVVREISQAAARRKMKFGVYLSPWDRNSAQYGTPEYIKLYRAQLSELLTGYGPIFEV
CCCHHHHHHHHHHHHHHEEECEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCHHHH
WHDGANGGDGYYGGAKEKRTIDKNTYYDWPRTWEMIRAMQPEAVVFSDVGPDVRWVGNER
HCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCEEEEECCCCCEEEECCCC
GVAGDPCWVAFDPVGEDGGAASPGNVRTKESGMGHRHGSKWLPAECDVSIRPGWFWHEAE
CCCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEECCCEEEECCC
NARVKKASQLVNLYYESVGRGATLLLNVPPNRDGLISSEDVASLKGLGGYLSGTFAQNLA
CCHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCHHHHHHHHCCCHHHHHHHHHHH
ARAKTDATHVRGNDKQYGPAQLLNGKPETFWATDDGVTSADVTFDLGRPVKFQVIRLREA
HHHCCCCCCCCCCCCCCCCHHHHCCCCCEEEECCCCCCCCEEEEECCCCCCHHHHHHHHH
IRFGQRVDAFTVERWQSDSWEQVASSTSIGPRRLIRLDAPIIATRLRLRVTQASASPALS
HHHCCCCCHHHHHHHCCCCHHHHHHCCCCCCCEEEEECCCHHEEEEEEEEECCCCCCCHH
EFAVFAEANLG
HHEEEEECCCC
>Mature Secondary Structure
MITRRTLLAGFPAVLAAARTTAPPSPYGAIPSARQQAWHELEFTGFLHFTVNTFTDKEWG
CCCCHHHHHCCHHHHHHHHCCCCCCCCCCCCHHHHHHHHHEEEEEEEEEEEEEECCCCCC
YGDEEPDIFNPARFDADVLVGALADAGMRGVILTCKHHDGFCLWPTRTTDHSVAQSRWRG
CCCCCCCCCCCCCCCHHHHHHHHHCCCCCEEEEEEEECCCEEECCCCCCCHHHHHHHCCC
GRGDVVREISQAAARRKMKFGVYLSPWDRNSAQYGTPEYIKLYRAQLSELLTGYGPIFEV
CCCHHHHHHHHHHHHHHEEECEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCHHHH
WHDGANGGDGYYGGAKEKRTIDKNTYYDWPRTWEMIRAMQPEAVVFSDVGPDVRWVGNER
HCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCEEEEECCCCCEEEECCCC
GVAGDPCWVAFDPVGEDGGAASPGNVRTKESGMGHRHGSKWLPAECDVSIRPGWFWHEAE
CCCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEECCCEEEECCC
NARVKKASQLVNLYYESVGRGATLLLNVPPNRDGLISSEDVASLKGLGGYLSGTFAQNLA
CCHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCHHHHHHHHCCCHHHHHHHHHHH
ARAKTDATHVRGNDKQYGPAQLLNGKPETFWATDDGVTSADVTFDLGRPVKFQVIRLREA
HHHCCCCCCCCCCCCCCCCHHHHCCCCCEEEECCCCCCCCEEEEECCCCCCHHHHHHHHH
IRFGQRVDAFTVERWQSDSWEQVASSTSIGPRRLIRLDAPIIATRLRLRVTQASASPALS
HHHCCCCCHHHHHHHCCCCHHHHHHCCCCCCCEEEEECCCHHEEEEEEEEECCCCCCCHH
EFAVFAEANLG
HHEEEEECCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA