Definition Candidatus Solibacter usitatus Ellin6076 chromosome, complete genome.
Accession NC_008536
Length 9,965,640

Click here to switch to the map view.

The map label for this gene is 116620496

Identifier: 116620496

GI number: 116620496

Start: 1692737

End: 1693528

Strand: Direct

Name: 116620496

Synonym: Acid_1374

Alternate gene names: NA

Gene position: 1692737-1693528 (Clockwise)

Preceding gene: 116620495

Following gene: 116620500

Centisome position: 16.99

GC content: 59.85

Gene sequence:

>792_bases
ATGATCGGCGAGGCCGTCTACGGCTATTGGACCCCATGCTTCTGGGGCTTGGCCGTCCTGGCGGGCTTTCTGGGCTGGGG
AAGCGCTATACAACGCGCAGGCTCCCTGCCCCAGACTGACTGGGGTTTGCGTTGTGCCTGGGGGATGGCATTTGTCACGG
TGTCGGGTGGATTACTGGCCTGCTTATCTCTCGCTGCCAAGCCCGTTTTAATTGGCATGGTGGCGGCCGGAGCTCTGCTC
GCAGTTCTGTTCTGTGGACCCAGCCTGTCATCAATCCTCACAAATCGACGCTCCACGCTCGGCGTCTTTGGCTTCGTGGC
ACTGATTCTTCTGTTCTACGCAGCGTTCGTGGATGTTCGCTGGTCCAACGCCTGCGATGACGATGTGGCGTACTTCGTAT
TTGCGAAACGGCTGCTCGATTCCGGGACGCTGATTGAGCCCTTCAGCCTGCGACGGCTTTCAGCGTATGGGGGCCACTCA
CTGCTGCAAGCCGTGATTTGGGCGTTCGGTTCTCAGAAGAGCCTTTACATTCTGGATGCCGGGCTCTGTGGCGTCGTGCT
GGCCGGCATGATATTCGGCAGCTGCCGCCGAGCCAAGATATCGATTGGTTGTGCATGCTTGATTGCCGGCGCGGCGATCC
TACTTCCGGTGCCGAGGATCAATTCCATGAGCCAGGCGACTGGCATCGTGCTCTTCTTCGCCCTCTTCCGCACCCTGCGG
AATTCGGCCCAGCGGACTCCGCGATGGCAGGACTGCGCAATAGCCGGAATGTGCACGGCAGCCGGTATGTAA

Upstream 100 bases:

>100_bases
CCATGGAACTTGTGTCGGTACACCCGATCTTGAAACTTCTTTCCTGGACTCGCCTCAACGACATCCTGCATGTTATCGGA
TGGCTTGACGACGGGTTGGT

Downstream 100 bases:

>100_bases
TCACCCGGCGGACCTAGTGGCCACTGATTGCCTTCACTCCGTGAAGGGAATCGGACTTGCTGAACTTGGGCCAGTTGAAG
CCGTAGAAGGCGACGAAGGC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 263; Mature: 263

Protein sequence:

>263_residues
MIGEAVYGYWTPCFWGLAVLAGFLGWGSAIQRAGSLPQTDWGLRCAWGMAFVTVSGGLLACLSLAAKPVLIGMVAAGALL
AVLFCGPSLSSILTNRRSTLGVFGFVALILLFYAAFVDVRWSNACDDDVAYFVFAKRLLDSGTLIEPFSLRRLSAYGGHS
LLQAVIWAFGSQKSLYILDAGLCGVVLAGMIFGSCRRAKISIGCACLIAGAAILLPVPRINSMSQATGIVLFFALFRTLR
NSAQRTPRWQDCAIAGMCTAAGM

Sequences:

>Translated_263_residues
MIGEAVYGYWTPCFWGLAVLAGFLGWGSAIQRAGSLPQTDWGLRCAWGMAFVTVSGGLLACLSLAAKPVLIGMVAAGALL
AVLFCGPSLSSILTNRRSTLGVFGFVALILLFYAAFVDVRWSNACDDDVAYFVFAKRLLDSGTLIEPFSLRRLSAYGGHS
LLQAVIWAFGSQKSLYILDAGLCGVVLAGMIFGSCRRAKISIGCACLIAGAAILLPVPRINSMSQATGIVLFFALFRTLR
NSAQRTPRWQDCAIAGMCTAAGM
>Mature_263_residues
MIGEAVYGYWTPCFWGLAVLAGFLGWGSAIQRAGSLPQTDWGLRCAWGMAFVTVSGGLLACLSLAAKPVLIGMVAAGALL
AVLFCGPSLSSILTNRRSTLGVFGFVALILLFYAAFVDVRWSNACDDDVAYFVFAKRLLDSGTLIEPFSLRRLSAYGGHS
LLQAVIWAFGSQKSLYILDAGLCGVVLAGMIFGSCRRAKISIGCACLIAGAAILLPVPRINSMSQATGIVLFFALFRTLR
NSAQRTPRWQDCAIAGMCTAAGM

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 27902; Mature: 27902

Theoretical pI: Translated: 8.91; Mature: 8.91

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

4.2 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
6.8 %Cys+Met (Translated Protein)
4.2 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
6.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIGEAVYGYWTPCFWGLAVLAGFLGWGSAIQRAGSLPQTDWGLRCAWGMAFVTVSGGLLA
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHH
CLSLAAKPVLIGMVAAGALLAVLFCGPSLSSILTNRRSTLGVFGFVALILLFYAAFVDVR
HHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCC
WSNACDDDVAYFVFAKRLLDSGTLIEPFSLRRLSAYGGHSLLQAVIWAFGSQKSLYILDA
CCCCCCHHHHHHHHHHHHHCCCCEECCHHHHHHHHCCCHHHHHHHHHHHCCCCEEEEEEC
GLCGVVLAGMIFGSCRRAKISIGCACLIAGAAILLPVPRINSMSQATGIVLFFALFRTLR
CHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHH
NSAQRTPRWQDCAIAGMCTAAGM
HHHHCCCCHHHHHHHHHHHHCCC
>Mature Secondary Structure
MIGEAVYGYWTPCFWGLAVLAGFLGWGSAIQRAGSLPQTDWGLRCAWGMAFVTVSGGLLA
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHH
CLSLAAKPVLIGMVAAGALLAVLFCGPSLSSILTNRRSTLGVFGFVALILLFYAAFVDVR
HHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCC
WSNACDDDVAYFVFAKRLLDSGTLIEPFSLRRLSAYGGHSLLQAVIWAFGSQKSLYILDA
CCCCCCHHHHHHHHHHHHHCCCCEECCHHHHHHHHCCCHHHHHHHHHHHCCCCEEEEEEC
GLCGVVLAGMIFGSCRRAKISIGCACLIAGAAILLPVPRINSMSQATGIVLFFALFRTLR
CHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHH
NSAQRTPRWQDCAIAGMCTAAGM
HHHHCCCCHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA